GO Enrichment Analysis of Co-expressed Genes with
AT2G39710
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033539: fatty acid beta-oxidation using acyl-CoA dehydrogenase | 0.00E+00 |
| 2 | GO:0009448: gamma-aminobutyric acid metabolic process | 0.00E+00 |
| 3 | GO:0006105: succinate metabolic process | 0.00E+00 |
| 4 | GO:0060213: positive regulation of nuclear-transcribed mRNA poly(A) tail shortening | 0.00E+00 |
| 5 | GO:0032497: detection of lipopolysaccharide | 0.00E+00 |
| 6 | GO:0019484: beta-alanine catabolic process | 0.00E+00 |
| 7 | GO:0006014: D-ribose metabolic process | 1.28E-05 |
| 8 | GO:0048544: recognition of pollen | 1.64E-05 |
| 9 | GO:0000291: nuclear-transcribed mRNA catabolic process, exonucleolytic | 7.07E-05 |
| 10 | GO:0035266: meristem growth | 7.07E-05 |
| 11 | GO:0009450: gamma-aminobutyric acid catabolic process | 7.07E-05 |
| 12 | GO:0007292: female gamete generation | 7.07E-05 |
| 13 | GO:0019478: D-amino acid catabolic process | 7.07E-05 |
| 14 | GO:0009865: pollen tube adhesion | 7.07E-05 |
| 15 | GO:0006540: glutamate decarboxylation to succinate | 7.07E-05 |
| 16 | GO:0045087: innate immune response | 8.17E-05 |
| 17 | GO:0009225: nucleotide-sugar metabolic process | 1.59E-04 |
| 18 | GO:0010033: response to organic substance | 1.70E-04 |
| 19 | GO:0051788: response to misfolded protein | 1.70E-04 |
| 20 | GO:0045948: positive regulation of translational initiation | 1.70E-04 |
| 21 | GO:0060968: regulation of gene silencing | 2.86E-04 |
| 22 | GO:0006020: inositol metabolic process | 4.15E-04 |
| 23 | GO:0009399: nitrogen fixation | 4.15E-04 |
| 24 | GO:0019252: starch biosynthetic process | 4.67E-04 |
| 25 | GO:0006542: glutamine biosynthetic process | 5.53E-04 |
| 26 | GO:0033320: UDP-D-xylose biosynthetic process | 5.53E-04 |
| 27 | GO:0006536: glutamate metabolic process | 5.53E-04 |
| 28 | GO:0048827: phyllome development | 8.57E-04 |
| 29 | GO:0048232: male gamete generation | 8.57E-04 |
| 30 | GO:0043248: proteasome assembly | 8.57E-04 |
| 31 | GO:0042732: D-xylose metabolic process | 8.57E-04 |
| 32 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 8.57E-04 |
| 33 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 1.02E-03 |
| 34 | GO:0009094: L-phenylalanine biosynthetic process | 1.02E-03 |
| 35 | GO:0031930: mitochondria-nucleus signaling pathway | 1.02E-03 |
| 36 | GO:0016051: carbohydrate biosynthetic process | 1.15E-03 |
| 37 | GO:0098869: cellular oxidant detoxification | 1.19E-03 |
| 38 | GO:0006333: chromatin assembly or disassembly | 1.19E-03 |
| 39 | GO:0006491: N-glycan processing | 1.37E-03 |
| 40 | GO:0010078: maintenance of root meristem identity | 1.37E-03 |
| 41 | GO:0006972: hyperosmotic response | 1.56E-03 |
| 42 | GO:0006367: transcription initiation from RNA polymerase II promoter | 1.56E-03 |
| 43 | GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway | 1.97E-03 |
| 44 | GO:0008202: steroid metabolic process | 1.97E-03 |
| 45 | GO:0048829: root cap development | 2.19E-03 |
| 46 | GO:0010629: negative regulation of gene expression | 2.19E-03 |
| 47 | GO:0006979: response to oxidative stress | 2.33E-03 |
| 48 | GO:0048367: shoot system development | 2.39E-03 |
| 49 | GO:0010015: root morphogenesis | 2.41E-03 |
| 50 | GO:0043085: positive regulation of catalytic activity | 2.41E-03 |
| 51 | GO:0006829: zinc II ion transport | 2.88E-03 |
| 52 | GO:0010102: lateral root morphogenesis | 2.88E-03 |
| 53 | GO:0006541: glutamine metabolic process | 3.12E-03 |
| 54 | GO:0009933: meristem structural organization | 3.12E-03 |
| 55 | GO:0005985: sucrose metabolic process | 3.37E-03 |
| 56 | GO:0090351: seedling development | 3.37E-03 |
| 57 | GO:0045333: cellular respiration | 3.89E-03 |
| 58 | GO:0006825: copper ion transport | 4.17E-03 |
| 59 | GO:0046686: response to cadmium ion | 4.50E-03 |
| 60 | GO:0030433: ubiquitin-dependent ERAD pathway | 4.73E-03 |
| 61 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 5.33E-03 |
| 62 | GO:0042391: regulation of membrane potential | 5.93E-03 |
| 63 | GO:0000413: protein peptidyl-prolyl isomerization | 5.93E-03 |
| 64 | GO:0010051: xylem and phloem pattern formation | 5.93E-03 |
| 65 | GO:0010154: fruit development | 6.24E-03 |
| 66 | GO:0010183: pollen tube guidance | 6.89E-03 |
| 67 | GO:0006891: intra-Golgi vesicle-mediated transport | 7.22E-03 |
| 68 | GO:0006914: autophagy | 8.25E-03 |
| 69 | GO:0046777: protein autophosphorylation | 9.76E-03 |
| 70 | GO:0042128: nitrate assimilation | 1.01E-02 |
| 71 | GO:0048573: photoperiodism, flowering | 1.05E-02 |
| 72 | GO:0016049: cell growth | 1.09E-02 |
| 73 | GO:0006886: intracellular protein transport | 1.13E-02 |
| 74 | GO:0010311: lateral root formation | 1.17E-02 |
| 75 | GO:0006499: N-terminal protein myristoylation | 1.21E-02 |
| 76 | GO:0010119: regulation of stomatal movement | 1.25E-02 |
| 77 | GO:0048364: root development | 1.41E-02 |
| 78 | GO:0030001: metal ion transport | 1.46E-02 |
| 79 | GO:0009744: response to sucrose | 1.59E-02 |
| 80 | GO:0009409: response to cold | 1.60E-02 |
| 81 | GO:0009636: response to toxic substance | 1.73E-02 |
| 82 | GO:0009965: leaf morphogenesis | 1.73E-02 |
| 83 | GO:0031347: regulation of defense response | 1.82E-02 |
| 84 | GO:0009626: plant-type hypersensitive response | 2.32E-02 |
| 85 | GO:0009611: response to wounding | 2.46E-02 |
| 86 | GO:0042545: cell wall modification | 2.47E-02 |
| 87 | GO:0018105: peptidyl-serine phosphorylation | 2.58E-02 |
| 88 | GO:0051726: regulation of cell cycle | 2.63E-02 |
| 89 | GO:0009790: embryo development | 3.31E-02 |
| 90 | GO:0006633: fatty acid biosynthetic process | 3.49E-02 |
| 91 | GO:0045490: pectin catabolic process | 3.73E-02 |
| 92 | GO:0010150: leaf senescence | 3.73E-02 |
| 93 | GO:0006470: protein dephosphorylation | 4.10E-02 |
| 94 | GO:0009617: response to bacterium | 4.23E-02 |
| 95 | GO:0006468: protein phosphorylation | 4.89E-02 |
| 96 | GO:0009651: response to salt stress | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051499: D-aminoacyl-tRNA deacylase activity | 0.00E+00 |
| 2 | GO:0047787: delta4-3-oxosteroid 5beta-reductase activity | 0.00E+00 |
| 3 | GO:0019211: phosphatase activator activity | 0.00E+00 |
| 4 | GO:0034387: 4-aminobutyrate:pyruvate transaminase activity | 0.00E+00 |
| 5 | GO:0004747: ribokinase activity | 1.83E-05 |
| 6 | GO:0008865: fructokinase activity | 3.30E-05 |
| 7 | GO:0035671: enone reductase activity | 7.07E-05 |
| 8 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 7.07E-05 |
| 9 | GO:0003867: 4-aminobutyrate transaminase activity | 7.07E-05 |
| 10 | GO:0019829: cation-transporting ATPase activity | 2.86E-04 |
| 11 | GO:0004383: guanylate cyclase activity | 2.86E-04 |
| 12 | GO:0001653: peptide receptor activity | 4.15E-04 |
| 13 | GO:0030527: structural constituent of chromatin | 4.15E-04 |
| 14 | GO:0047769: arogenate dehydratase activity | 5.53E-04 |
| 15 | GO:0004664: prephenate dehydratase activity | 5.53E-04 |
| 16 | GO:0050378: UDP-glucuronate 4-epimerase activity | 5.53E-04 |
| 17 | GO:0009916: alternative oxidase activity | 5.53E-04 |
| 18 | GO:0004356: glutamate-ammonia ligase activity | 7.00E-04 |
| 19 | GO:0048040: UDP-glucuronate decarboxylase activity | 8.57E-04 |
| 20 | GO:0031369: translation initiation factor binding | 8.57E-04 |
| 21 | GO:0036402: proteasome-activating ATPase activity | 8.57E-04 |
| 22 | GO:0070403: NAD+ binding | 1.02E-03 |
| 23 | GO:0003950: NAD+ ADP-ribosyltransferase activity | 1.02E-03 |
| 24 | GO:0003730: mRNA 3'-UTR binding | 1.02E-03 |
| 25 | GO:0004602: glutathione peroxidase activity | 1.02E-03 |
| 26 | GO:0050897: cobalt ion binding | 1.05E-03 |
| 27 | GO:0004869: cysteine-type endopeptidase inhibitor activity | 1.37E-03 |
| 28 | GO:0005375: copper ion transmembrane transporter activity | 1.56E-03 |
| 29 | GO:0047617: acyl-CoA hydrolase activity | 1.97E-03 |
| 30 | GO:0015020: glucuronosyltransferase activity | 2.19E-03 |
| 31 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 2.88E-03 |
| 32 | GO:0016301: kinase activity | 2.98E-03 |
| 33 | GO:0030552: cAMP binding | 3.37E-03 |
| 34 | GO:0030553: cGMP binding | 3.37E-03 |
| 35 | GO:0017025: TBP-class protein binding | 3.37E-03 |
| 36 | GO:0004672: protein kinase activity | 4.12E-03 |
| 37 | GO:0005216: ion channel activity | 4.17E-03 |
| 38 | GO:0005524: ATP binding | 5.21E-03 |
| 39 | GO:0003727: single-stranded RNA binding | 5.32E-03 |
| 40 | GO:0005249: voltage-gated potassium channel activity | 5.93E-03 |
| 41 | GO:0030551: cyclic nucleotide binding | 5.93E-03 |
| 42 | GO:0046873: metal ion transmembrane transporter activity | 6.24E-03 |
| 43 | GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity | 6.24E-03 |
| 44 | GO:0030246: carbohydrate binding | 6.49E-03 |
| 45 | GO:0050662: coenzyme binding | 6.56E-03 |
| 46 | GO:0005507: copper ion binding | 6.98E-03 |
| 47 | GO:0046982: protein heterodimerization activity | 7.22E-03 |
| 48 | GO:0005516: calmodulin binding | 7.48E-03 |
| 49 | GO:0050660: flavin adenine dinucleotide binding | 8.51E-03 |
| 50 | GO:0016597: amino acid binding | 8.97E-03 |
| 51 | GO:0008375: acetylglucosaminyltransferase activity | 1.01E-02 |
| 52 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.01E-02 |
| 53 | GO:0004683: calmodulin-dependent protein kinase activity | 1.05E-02 |
| 54 | GO:0003824: catalytic activity | 1.23E-02 |
| 55 | GO:0003697: single-stranded DNA binding | 1.33E-02 |
| 56 | GO:0003993: acid phosphatase activity | 1.37E-02 |
| 57 | GO:0009055: electron carrier activity | 1.45E-02 |
| 58 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.77E-02 |
| 59 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.97E-02 |
| 60 | GO:0016887: ATPase activity | 2.10E-02 |
| 61 | GO:0031625: ubiquitin protein ligase binding | 2.11E-02 |
| 62 | GO:0045330: aspartyl esterase activity | 2.11E-02 |
| 63 | GO:0030599: pectinesterase activity | 2.42E-02 |
| 64 | GO:0004674: protein serine/threonine kinase activity | 2.55E-02 |
| 65 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 3.02E-02 |
| 66 | GO:0030170: pyridoxal phosphate binding | 3.19E-02 |
| 67 | GO:0008565: protein transporter activity | 3.37E-02 |
| 68 | GO:0046910: pectinesterase inhibitor activity | 3.55E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005783: endoplasmic reticulum | 8.34E-05 |
| 2 | GO:0005776: autophagosome | 5.53E-04 |
| 3 | GO:0016363: nuclear matrix | 1.02E-03 |
| 4 | GO:0031597: cytosolic proteasome complex | 1.02E-03 |
| 5 | GO:0000786: nucleosome | 1.10E-03 |
| 6 | GO:0031595: nuclear proteasome complex | 1.19E-03 |
| 7 | GO:0005886: plasma membrane | 1.65E-03 |
| 8 | GO:0005829: cytosol | 1.77E-03 |
| 9 | GO:0008540: proteasome regulatory particle, base subcomplex | 1.97E-03 |
| 10 | GO:0016021: integral component of membrane | 2.18E-03 |
| 11 | GO:0090404: pollen tube tip | 2.41E-03 |
| 12 | GO:0005665: DNA-directed RNA polymerase II, core complex | 2.64E-03 |
| 13 | GO:0005795: Golgi stack | 3.37E-03 |
| 14 | GO:0070469: respiratory chain | 4.17E-03 |
| 15 | GO:0031410: cytoplasmic vesicle | 4.73E-03 |
| 16 | GO:0000785: chromatin | 7.56E-03 |
| 17 | GO:0071944: cell periphery | 7.90E-03 |
| 18 | GO:0032580: Golgi cisterna membrane | 8.25E-03 |
| 19 | GO:0000932: P-body | 9.34E-03 |
| 20 | GO:0005794: Golgi apparatus | 9.80E-03 |
| 21 | GO:0031902: late endosome membrane | 1.50E-02 |
| 22 | GO:0000502: proteasome complex | 1.97E-02 |
| 23 | GO:0010008: endosome membrane | 2.26E-02 |
| 24 | GO:0005759: mitochondrial matrix | 3.49E-02 |
| 25 | GO:0005802: trans-Golgi network | 3.84E-02 |
| 26 | GO:0005768: endosome | 4.36E-02 |