co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G39400

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0097031: mitochondrial respiratory chain complex I biogenesis	0.00E+00
2	GO:0097034: mitochondrial respiratory chain complex IV biogenesis	0.00E+00
3	GO:0046459: short-chain fatty acid metabolic process	0.00E+00
4	GO:0051245: negative regulation of cellular defense response	8.86E-06
5	GO:2000693: positive regulation of seed maturation	2.38E-05
6	GO:0006612: protein targeting to membrane	6.64E-05
7	GO:0019438: aromatic compound biosynthetic process	6.64E-05
8	GO:0010363: regulation of plant-type hypersensitive response	9.27E-05
9	GO:0009061: anaerobic respiration	2.54E-04
10	GO:0000373: Group II intron splicing	3.29E-04
11	GO:0007338: single fertilization	3.29E-04
12	GO:0008202: steroid metabolic process	3.67E-04
13	GO:0043069: negative regulation of programmed cell death	4.07E-04
14	GO:0009863: salicylic acid mediated signaling pathway	7.11E-04
15	GO:0048278: vesicle docking	8.05E-04
16	GO:0061025: membrane fusion	1.16E-03
17	GO:0006635: fatty acid beta-oxidation	1.26E-03
18	GO:0009567: double fertilization forming a zygote and endosperm	1.43E-03
19	GO:0001666: response to hypoxia	1.61E-03
20	GO:0006906: vesicle fusion	1.73E-03
21	GO:0009738: abscisic acid-activated signaling pathway	1.74E-03
22	GO:0009867: jasmonic acid mediated signaling pathway	2.25E-03
23	GO:0006887: exocytosis	2.52E-03
24	GO:0010150: leaf senescence	6.03E-03
25	GO:0010468: regulation of gene expression	6.81E-03
26	GO:0045944: positive regulation of transcription from RNA polymerase II promoter	7.74E-03
27	GO:0009793: embryo development ending in seed dormancy	8.27E-03
28	GO:0044550: secondary metabolite biosynthetic process	1.01E-02
29	GO:0050832: defense response to fungus	1.06E-02
30	GO:0006886: intracellular protein transport	1.10E-02
31	GO:0006869: lipid transport	1.15E-02
32	GO:0032259: methylation	1.21E-02
33	GO:0006397: mRNA processing	1.29E-02
34	GO:0009873: ethylene-activated signaling pathway	1.50E-02
35	GO:0045893: positive regulation of transcription, DNA-templated	2.07E-02
36	GO:0042742: defense response to bacterium	3.10E-02
37	GO:0006979: response to oxidative stress	3.12E-02
38	GO:0009409: response to cold	3.85E-02

Rank	GO Term	Adjusted P value
1	GO:0032934: sterol binding	2.38E-05
2	GO:0001077: transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	2.38E-05
3	GO:0003995: acyl-CoA dehydrogenase activity	9.27E-05
4	GO:0003997: acyl-CoA oxidase activity	1.21E-04
5	GO:0008142: oxysterol binding	2.91E-04
6	GO:0008171: O-methyltransferase activity	4.07E-04
7	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.86E-03
8	GO:0000149: SNARE binding	2.39E-03
9	GO:0005484: SNAP receptor activity	2.67E-03
10	GO:0045735: nutrient reservoir activity	3.65E-03
11	GO:0046982: protein heterodimerization activity	8.05E-03
12	GO:0050660: flavin adenine dinucleotide binding	9.03E-03
13	GO:0003674: molecular_function	9.94E-03
14	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.14E-02
15	GO:0043565: sequence-specific DNA binding	1.84E-02
16	GO:0019825: oxygen binding	2.41E-02
17	GO:0005516: calmodulin binding	2.51E-02
18	GO:0005506: iron ion binding	3.07E-02
19	GO:0016491: oxidoreductase activity	3.78E-02
20	GO:0046983: protein dimerization activity	3.81E-02
21	GO:0020037: heme binding	4.30E-02

Rank	GO Term	Adjusted P value
1	GO:0009514: glyoxysome	2.91E-04
2	GO:0030529: intracellular ribonucleoprotein complex	1.61E-03
3	GO:0031201: SNARE complex	2.52E-03
4	GO:0012505: endomembrane system	4.06E-03
5	GO:0005777: peroxisome	2.07E-02
6	GO:0005783: endoplasmic reticulum	2.51E-02
7	GO:0005886: plasma membrane	2.69E-02
8	GO:0009506: plasmodesma	4.74E-02