GO Enrichment Analysis of Co-expressed Genes with
AT2G38460
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090279: regulation of calcium ion import | 0.00E+00 |
| 2 | GO:0032928: regulation of superoxide anion generation | 0.00E+00 |
| 3 | GO:1904526: regulation of microtubule binding | 0.00E+00 |
| 4 | GO:0071474: cellular hyperosmotic response | 0.00E+00 |
| 5 | GO:0070584: mitochondrion morphogenesis | 0.00E+00 |
| 6 | GO:0015979: photosynthesis | 4.10E-08 |
| 7 | GO:0016122: xanthophyll metabolic process | 2.81E-07 |
| 8 | GO:0015995: chlorophyll biosynthetic process | 4.86E-05 |
| 9 | GO:0010028: xanthophyll cycle | 7.07E-05 |
| 10 | GO:0035304: regulation of protein dephosphorylation | 1.70E-04 |
| 11 | GO:0051262: protein tetramerization | 1.70E-04 |
| 12 | GO:0051639: actin filament network formation | 4.15E-04 |
| 13 | GO:0042938: dipeptide transport | 5.53E-04 |
| 14 | GO:0051764: actin crosslink formation | 5.53E-04 |
| 15 | GO:0009765: photosynthesis, light harvesting | 5.53E-04 |
| 16 | GO:0015994: chlorophyll metabolic process | 5.53E-04 |
| 17 | GO:0010117: photoprotection | 7.00E-04 |
| 18 | GO:0006655: phosphatidylglycerol biosynthetic process | 8.57E-04 |
| 19 | GO:0042549: photosystem II stabilization | 8.57E-04 |
| 20 | GO:0045926: negative regulation of growth | 1.02E-03 |
| 21 | GO:0009942: longitudinal axis specification | 1.02E-03 |
| 22 | GO:0010189: vitamin E biosynthetic process | 1.02E-03 |
| 23 | GO:0071470: cellular response to osmotic stress | 1.02E-03 |
| 24 | GO:0009645: response to low light intensity stimulus | 1.19E-03 |
| 25 | GO:0080186: developmental vegetative growth | 1.19E-03 |
| 26 | GO:0009769: photosynthesis, light harvesting in photosystem II | 1.19E-03 |
| 27 | GO:0034599: cellular response to oxidative stress | 1.20E-03 |
| 28 | GO:0009642: response to light intensity | 1.37E-03 |
| 29 | GO:0007389: pattern specification process | 1.56E-03 |
| 30 | GO:0007186: G-protein coupled receptor signaling pathway | 1.56E-03 |
| 31 | GO:0048574: long-day photoperiodism, flowering | 1.56E-03 |
| 32 | GO:0048507: meristem development | 1.76E-03 |
| 33 | GO:0010205: photoinhibition | 1.97E-03 |
| 34 | GO:0006779: porphyrin-containing compound biosynthetic process | 1.97E-03 |
| 35 | GO:1900865: chloroplast RNA modification | 1.97E-03 |
| 36 | GO:0006629: lipid metabolic process | 2.16E-03 |
| 37 | GO:0009688: abscisic acid biosynthetic process | 2.19E-03 |
| 38 | GO:0006949: syncytium formation | 2.19E-03 |
| 39 | GO:0006782: protoporphyrinogen IX biosynthetic process | 2.19E-03 |
| 40 | GO:0019684: photosynthesis, light reaction | 2.41E-03 |
| 41 | GO:0043085: positive regulation of catalytic activity | 2.41E-03 |
| 42 | GO:0030148: sphingolipid biosynthetic process | 2.41E-03 |
| 43 | GO:0009698: phenylpropanoid metabolic process | 2.41E-03 |
| 44 | GO:0009773: photosynthetic electron transport in photosystem I | 2.41E-03 |
| 45 | GO:0015706: nitrate transport | 2.64E-03 |
| 46 | GO:0016024: CDP-diacylglycerol biosynthetic process | 2.64E-03 |
| 47 | GO:0010207: photosystem II assembly | 3.12E-03 |
| 48 | GO:0034976: response to endoplasmic reticulum stress | 3.63E-03 |
| 49 | GO:0051017: actin filament bundle assembly | 3.89E-03 |
| 50 | GO:0005992: trehalose biosynthetic process | 3.89E-03 |
| 51 | GO:0009768: photosynthesis, light harvesting in photosystem I | 4.17E-03 |
| 52 | GO:0006874: cellular calcium ion homeostasis | 4.17E-03 |
| 53 | GO:0007017: microtubule-based process | 4.17E-03 |
| 54 | GO:0009269: response to desiccation | 4.44E-03 |
| 55 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 5.02E-03 |
| 56 | GO:0070417: cellular response to cold | 5.62E-03 |
| 57 | GO:0006662: glycerol ether metabolic process | 6.24E-03 |
| 58 | GO:0010305: leaf vascular tissue pattern formation | 6.24E-03 |
| 59 | GO:0007018: microtubule-based movement | 6.56E-03 |
| 60 | GO:0008654: phospholipid biosynthetic process | 6.89E-03 |
| 61 | GO:0010193: response to ozone | 7.22E-03 |
| 62 | GO:0010583: response to cyclopentenone | 7.56E-03 |
| 63 | GO:0009828: plant-type cell wall loosening | 8.25E-03 |
| 64 | GO:0010252: auxin homeostasis | 8.25E-03 |
| 65 | GO:0045454: cell redox homeostasis | 1.09E-02 |
| 66 | GO:0018298: protein-chromophore linkage | 1.13E-02 |
| 67 | GO:0010218: response to far red light | 1.21E-02 |
| 68 | GO:0006811: ion transport | 1.21E-02 |
| 69 | GO:0007568: aging | 1.25E-02 |
| 70 | GO:0009910: negative regulation of flower development | 1.25E-02 |
| 71 | GO:0009637: response to blue light | 1.33E-02 |
| 72 | GO:0048364: root development | 1.41E-02 |
| 73 | GO:0006631: fatty acid metabolic process | 1.50E-02 |
| 74 | GO:0010114: response to red light | 1.59E-02 |
| 75 | GO:0009926: auxin polar transport | 1.59E-02 |
| 76 | GO:0009640: photomorphogenesis | 1.59E-02 |
| 77 | GO:0009644: response to high light intensity | 1.68E-02 |
| 78 | GO:0009664: plant-type cell wall organization | 1.87E-02 |
| 79 | GO:0006486: protein glycosylation | 1.97E-02 |
| 80 | GO:0010224: response to UV-B | 2.01E-02 |
| 81 | GO:0006857: oligopeptide transport | 2.06E-02 |
| 82 | GO:0009735: response to cytokinin | 2.20E-02 |
| 83 | GO:0043086: negative regulation of catalytic activity | 2.21E-02 |
| 84 | GO:0009416: response to light stimulus | 2.40E-02 |
| 85 | GO:0009845: seed germination | 3.14E-02 |
| 86 | GO:0009790: embryo development | 3.31E-02 |
| 87 | GO:0006413: translational initiation | 3.55E-02 |
| 88 | GO:0007623: circadian rhythm | 3.73E-02 |
| 89 | GO:0006470: protein dephosphorylation | 4.10E-02 |
| 90 | GO:0008380: RNA splicing | 4.23E-02 |
| 91 | GO:0006508: proteolysis | 4.45E-02 |
| 92 | GO:0006979: response to oxidative stress | 4.87E-02 |
| 93 | GO:0009826: unidimensional cell growth | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 2 | GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity | 0.00E+00 |
| 3 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 4 | GO:0004462: lactoylglutathione lyase activity | 1.28E-05 |
| 5 | GO:0052631: sphingolipid delta-8 desaturase activity | 7.07E-05 |
| 6 | GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity | 7.07E-05 |
| 7 | GO:0005227: calcium activated cation channel activity | 7.07E-05 |
| 8 | GO:0010242: oxygen evolving activity | 7.07E-05 |
| 9 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 7.07E-05 |
| 10 | GO:0019172: glyoxalase III activity | 1.70E-04 |
| 11 | GO:0008963: phospho-N-acetylmuramoyl-pentapeptide-transferase activity | 1.70E-04 |
| 12 | GO:0016868: intramolecular transferase activity, phosphotransferases | 1.70E-04 |
| 13 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 1.70E-04 |
| 14 | GO:0016805: dipeptidase activity | 2.86E-04 |
| 15 | GO:0004180: carboxypeptidase activity | 2.86E-04 |
| 16 | GO:0019201: nucleotide kinase activity | 4.15E-04 |
| 17 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 4.15E-04 |
| 18 | GO:0016851: magnesium chelatase activity | 4.15E-04 |
| 19 | GO:0009011: starch synthase activity | 5.53E-04 |
| 20 | GO:0042936: dipeptide transporter activity | 5.53E-04 |
| 21 | GO:0004930: G-protein coupled receptor activity | 5.53E-04 |
| 22 | GO:0004605: phosphatidate cytidylyltransferase activity | 8.57E-04 |
| 23 | GO:0004017: adenylate kinase activity | 1.02E-03 |
| 24 | GO:0004602: glutathione peroxidase activity | 1.02E-03 |
| 25 | GO:0005261: cation channel activity | 1.02E-03 |
| 26 | GO:0009672: auxin:proton symporter activity | 1.97E-03 |
| 27 | GO:0004805: trehalose-phosphatase activity | 2.19E-03 |
| 28 | GO:0008047: enzyme activator activity | 2.19E-03 |
| 29 | GO:0047372: acylglycerol lipase activity | 2.41E-03 |
| 30 | GO:0010329: auxin efflux transmembrane transporter activity | 2.88E-03 |
| 31 | GO:0008266: poly(U) RNA binding | 3.12E-03 |
| 32 | GO:0004970: ionotropic glutamate receptor activity | 3.37E-03 |
| 33 | GO:0005217: intracellular ligand-gated ion channel activity | 3.37E-03 |
| 34 | GO:0031409: pigment binding | 3.63E-03 |
| 35 | GO:0005216: ion channel activity | 4.17E-03 |
| 36 | GO:0003756: protein disulfide isomerase activity | 5.32E-03 |
| 37 | GO:0047134: protein-disulfide reductase activity | 5.62E-03 |
| 38 | GO:0008536: Ran GTPase binding | 6.24E-03 |
| 39 | GO:0004791: thioredoxin-disulfide reductase activity | 6.56E-03 |
| 40 | GO:0019901: protein kinase binding | 6.89E-03 |
| 41 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 7.90E-03 |
| 42 | GO:0051015: actin filament binding | 7.90E-03 |
| 43 | GO:0005200: structural constituent of cytoskeleton | 8.61E-03 |
| 44 | GO:0016168: chlorophyll binding | 9.71E-03 |
| 45 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.13E-02 |
| 46 | GO:0005215: transporter activity | 1.24E-02 |
| 47 | GO:0004185: serine-type carboxypeptidase activity | 1.59E-02 |
| 48 | GO:0003777: microtubule motor activity | 2.11E-02 |
| 49 | GO:0003779: actin binding | 2.47E-02 |
| 50 | GO:0015035: protein disulfide oxidoreductase activity | 2.58E-02 |
| 51 | GO:0005515: protein binding | 2.61E-02 |
| 52 | GO:0016829: lyase activity | 3.14E-02 |
| 53 | GO:0004252: serine-type endopeptidase activity | 3.19E-02 |
| 54 | GO:0046910: pectinesterase inhibitor activity | 3.55E-02 |
| 55 | GO:0008017: microtubule binding | 3.85E-02 |
| 56 | GO:0003743: translation initiation factor activity | 4.16E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 2 | GO:0009534: chloroplast thylakoid | 2.03E-16 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 3.56E-15 |
| 4 | GO:0009507: chloroplast | 6.91E-13 |
| 5 | GO:0010287: plastoglobule | 9.97E-07 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 1.15E-06 |
| 7 | GO:0009579: thylakoid | 1.40E-06 |
| 8 | GO:0030095: chloroplast photosystem II | 2.41E-06 |
| 9 | GO:0009517: PSII associated light-harvesting complex II | 4.96E-06 |
| 10 | GO:0009522: photosystem I | 1.64E-05 |
| 11 | GO:0009941: chloroplast envelope | 2.14E-05 |
| 12 | GO:0009538: photosystem I reaction center | 3.30E-05 |
| 13 | GO:0031977: thylakoid lumen | 1.06E-04 |
| 14 | GO:0030093: chloroplast photosystem I | 1.70E-04 |
| 15 | GO:0010007: magnesium chelatase complex | 2.86E-04 |
| 16 | GO:0009570: chloroplast stroma | 3.07E-04 |
| 17 | GO:0032432: actin filament bundle | 4.15E-04 |
| 18 | GO:0055035: plastid thylakoid membrane | 7.00E-04 |
| 19 | GO:0016021: integral component of membrane | 1.08E-03 |
| 20 | GO:0045298: tubulin complex | 1.76E-03 |
| 21 | GO:0005884: actin filament | 2.41E-03 |
| 22 | GO:0030076: light-harvesting complex | 3.37E-03 |
| 23 | GO:0009654: photosystem II oxygen evolving complex | 4.17E-03 |
| 24 | GO:0005871: kinesin complex | 5.62E-03 |
| 25 | GO:0009523: photosystem II | 6.89E-03 |
| 26 | GO:0019898: extrinsic component of membrane | 6.89E-03 |
| 27 | GO:0016020: membrane | 7.97E-03 |
| 28 | GO:0005874: microtubule | 8.82E-03 |
| 29 | GO:0031969: chloroplast membrane | 9.13E-03 |
| 30 | GO:0005783: endoplasmic reticulum | 1.39E-02 |
| 31 | GO:0005789: endoplasmic reticulum membrane | 1.87E-02 |
| 32 | GO:0009706: chloroplast inner membrane | 2.53E-02 |
| 33 | GO:0005623: cell | 3.02E-02 |