co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G38210

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0018316: peptide cross-linking via L-cystine	0.00E+00
2	GO:0015843: methylammonium transport	0.00E+00
3	GO:0015822: ornithine transport	0.00E+00
4	GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene	0.00E+00
5	GO:0010336: gibberellic acid homeostasis	0.00E+00
6	GO:0010423: negative regulation of brassinosteroid biosynthetic process	0.00E+00
7	GO:0080167: response to karrikin	7.30E-08
8	GO:0009813: flavonoid biosynthetic process	3.35E-06
9	GO:0009963: positive regulation of flavonoid biosynthetic process	3.77E-06
10	GO:0009765: photosynthesis, light harvesting	7.19E-06
11	GO:0006559: L-phenylalanine catabolic process	1.83E-05
12	GO:0010076: maintenance of floral meristem identity	2.61E-05
13	GO:0006659: phosphatidylserine biosynthetic process	8.78E-05
14	GO:0019605: butyrate metabolic process	8.78E-05
15	GO:0071454: cellular response to anoxia	8.78E-05
16	GO:0006083: acetate metabolic process	8.78E-05
17	GO:0048438: floral whorl development	8.78E-05
18	GO:0000066: mitochondrial ornithine transport	8.78E-05
19	GO:0016119: carotene metabolic process	8.78E-05
20	GO:1901349: glucosinolate transport	8.78E-05
21	GO:0031539: positive regulation of anthocyanin metabolic process	8.78E-05
22	GO:0090449: phloem glucosinolate loading	8.78E-05
23	GO:0000272: polysaccharide catabolic process	1.25E-04
24	GO:0009698: phenylpropanoid metabolic process	1.25E-04
25	GO:0010220: positive regulation of vernalization response	2.08E-04
26	GO:0080183: response to photooxidative stress	2.08E-04
27	GO:0080153: negative regulation of reductive pentose-phosphate cycle	2.08E-04
28	GO:0019853: L-ascorbic acid biosynthetic process	2.16E-04
29	GO:0010224: response to UV-B	2.82E-04
30	GO:1901562: response to paraquat	3.48E-04
31	GO:0046417: chorismate metabolic process	3.48E-04
32	GO:0071492: cellular response to UV-A	3.48E-04
33	GO:0044375: regulation of peroxisome size	3.48E-04
34	GO:0040009: regulation of growth rate	3.48E-04
35	GO:0006651: diacylglycerol biosynthetic process	3.48E-04
36	GO:0009411: response to UV	3.93E-04
37	GO:0016117: carotenoid biosynthetic process	4.63E-04
38	GO:0015696: ammonium transport	5.01E-04
39	GO:0006572: tyrosine catabolic process	5.01E-04
40	GO:0009650: UV protection	5.01E-04
41	GO:0006520: cellular amino acid metabolic process	5.37E-04
42	GO:0006021: inositol biosynthetic process	6.66E-04
43	GO:0034613: cellular protein localization	6.66E-04
44	GO:0071486: cellular response to high light intensity	6.66E-04
45	GO:0048442: sepal development	6.66E-04
46	GO:0019464: glycine decarboxylation via glycine cleavage system	6.66E-04
47	GO:0072488: ammonium transmembrane transport	6.66E-04
48	GO:0006546: glycine catabolic process	6.66E-04
49	GO:0006097: glyoxylate cycle	8.44E-04
50	GO:0016123: xanthophyll biosynthetic process	8.44E-04
51	GO:0009435: NAD biosynthetic process	8.44E-04
52	GO:0016094: polyprenol biosynthetic process	8.44E-04
53	GO:0071493: cellular response to UV-B	8.44E-04
54	GO:0019408: dolichol biosynthetic process	8.44E-04
55	GO:0016120: carotene biosynthetic process	8.44E-04
56	GO:0050665: hydrogen peroxide biosynthetic process	1.03E-03
57	GO:0010304: PSII associated light-harvesting complex II catabolic process	1.03E-03
58	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	1.03E-03
59	GO:0006796: phosphate-containing compound metabolic process	1.03E-03
60	GO:0000060: protein import into nucleus, translocation	1.03E-03
61	GO:0017148: negative regulation of translation	1.23E-03
62	GO:0009854: oxidative photosynthetic carbon pathway	1.23E-03
63	GO:0010077: maintenance of inflorescence meristem identity	1.23E-03
64	GO:0010218: response to far red light	1.32E-03
65	GO:0098869: cellular oxidant detoxification	1.44E-03
66	GO:0009637: response to blue light	1.52E-03
67	GO:0016559: peroxisome fission	1.66E-03
68	GO:0009787: regulation of abscisic acid-activated signaling pathway	1.66E-03
69	GO:0010099: regulation of photomorphogenesis	1.89E-03
70	GO:0022900: electron transport chain	1.89E-03
71	GO:0015996: chlorophyll catabolic process	1.89E-03
72	GO:0010114: response to red light	1.94E-03
73	GO:0009926: auxin polar transport	1.94E-03
74	GO:0009056: catabolic process	2.14E-03
75	GO:0000165: MAPK cascade	2.35E-03
76	GO:0009585: red, far-red light phototransduction	2.61E-03
77	GO:0051555: flavonol biosynthetic process	2.65E-03
78	GO:0048441: petal development	2.65E-03
79	GO:0006857: oligopeptide transport	2.79E-03
80	GO:0009073: aromatic amino acid family biosynthetic process	2.93E-03
81	GO:0052544: defense response by callose deposition in cell wall	2.93E-03
82	GO:0006629: lipid metabolic process	3.11E-03
83	GO:0010582: floral meristem determinacy	3.21E-03
84	GO:0006006: glucose metabolic process	3.50E-03
85	GO:0010223: secondary shoot formation	3.80E-03
86	GO:0009934: regulation of meristem structural organization	3.80E-03
87	GO:0034605: cellular response to heat	3.80E-03
88	GO:0048440: carpel development	3.80E-03
89	GO:0019253: reductive pentose-phosphate cycle	3.80E-03
90	GO:0009225: nucleotide-sugar metabolic process	4.10E-03
91	GO:0007031: peroxisome organization	4.10E-03
92	GO:0042753: positive regulation of circadian rhythm	4.42E-03
93	GO:0006487: protein N-linked glycosylation	4.74E-03
94	GO:0009768: photosynthesis, light harvesting in photosystem I	5.07E-03
95	GO:0019915: lipid storage	5.42E-03
96	GO:0010017: red or far-red light signaling pathway	5.76E-03
97	GO:0006633: fatty acid biosynthetic process	5.78E-03
98	GO:0010584: pollen exine formation	6.48E-03
99	GO:0048443: stamen development	6.48E-03
100	GO:0070417: cellular response to cold	6.86E-03
101	GO:0042631: cellular response to water deprivation	7.24E-03
102	GO:0009958: positive gravitropism	7.62E-03
103	GO:0008654: phospholipid biosynthetic process	8.42E-03
104	GO:0009791: post-embryonic development	8.42E-03
105	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	8.83E-03
106	GO:0045944: positive regulation of transcription from RNA polymerase II promoter	9.10E-03
107	GO:0055114: oxidation-reduction process	1.00E-02
108	GO:0010252: auxin homeostasis	1.01E-02
109	GO:0009911: positive regulation of flower development	1.14E-02
110	GO:0042128: nitrate assimilation	1.24E-02
111	GO:0048573: photoperiodism, flowering	1.28E-02
112	GO:0018298: protein-chromophore linkage	1.38E-02
113	GO:0010311: lateral root formation	1.43E-02
114	GO:0006811: ion transport	1.48E-02
115	GO:0010119: regulation of stomatal movement	1.53E-02
116	GO:0030154: cell differentiation	1.76E-02
117	GO:0016042: lipid catabolic process	1.76E-02
118	GO:0006839: mitochondrial transport	1.79E-02
119	GO:0009408: response to heat	1.81E-02
120	GO:0009733: response to auxin	1.83E-02
121	GO:0009744: response to sucrose	1.95E-02
122	GO:0009640: photomorphogenesis	1.95E-02
123	GO:0008152: metabolic process	1.99E-02
124	GO:0042546: cell wall biogenesis	2.01E-02
125	GO:0031347: regulation of defense response	2.24E-02
126	GO:0009809: lignin biosynthetic process	2.41E-02
127	GO:0006486: protein glycosylation	2.41E-02
128	GO:0006810: transport	2.56E-02
129	GO:0009909: regulation of flower development	2.60E-02
130	GO:0006468: protein phosphorylation	2.72E-02
131	GO:0006096: glycolytic process	2.72E-02
132	GO:0009740: gibberellic acid mediated signaling pathway	2.97E-02
133	GO:0042545: cell wall modification	3.04E-02
134	GO:0009624: response to nematode	3.10E-02
135	GO:0018105: peptidyl-serine phosphorylation	3.17E-02
136	GO:0009416: response to light stimulus	3.21E-02
137	GO:0009742: brassinosteroid mediated signaling pathway	3.23E-02
138	GO:0009611: response to wounding	3.28E-02
139	GO:0035556: intracellular signal transduction	3.38E-02
140	GO:0009058: biosynthetic process	3.78E-02
141	GO:0045490: pectin catabolic process	4.58E-02
142	GO:0009739: response to gibberellin	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0010472: GDP-galactose:glucose-1-phosphate guanylyltransferase activity	0.00E+00
2	GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity	0.00E+00
3	GO:0008928: mannose-1-phosphate guanylyltransferase (GDP) activity	0.00E+00
4	GO:1990055: phenylacetaldehyde synthase activity	0.00E+00
5	GO:0016719: carotene 7,8-desaturase activity	0.00E+00
6	GO:0010474: glucose-1-phosphate guanylyltransferase (GDP) activity	0.00E+00
7	GO:0010473: GDP-galactose:myoinositol-1-phosphate guanylyltransferase activity	0.00E+00
8	GO:0044318: L-aspartate:fumarate oxidoreductase activity	0.00E+00
9	GO:0008734: L-aspartate oxidase activity	0.00E+00
10	GO:0047918: GDP-mannose 3,5-epimerase activity	0.00E+00
11	GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity	0.00E+00
12	GO:0047213: anthocyanidin 3-O-glucosyltransferase activity	0.00E+00
13	GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity	0.00E+00
14	GO:0010471: GDP-galactose:mannose-1-phosphate guanylyltransferase activity	0.00E+00
15	GO:0033961: cis-stilbene-oxide hydrolase activity	0.00E+00
16	GO:0045430: chalcone isomerase activity	7.19E-06
17	GO:0016161: beta-amylase activity	2.61E-05
18	GO:0090448: glucosinolate:proton symporter activity	8.78E-05
19	GO:0004837: tyrosine decarboxylase activity	8.78E-05
20	GO:0045486: naringenin 3-dioxygenase activity	8.78E-05
21	GO:0080048: GDP-D-glucose phosphorylase activity	8.78E-05
22	GO:0003987: acetate-CoA ligase activity	8.78E-05
23	GO:0010475: galactose-1-phosphate guanylyltransferase (GDP) activity	8.78E-05
24	GO:0080047: GDP-L-galactose phosphorylase activity	8.78E-05
25	GO:0047760: butyrate-CoA ligase activity	8.78E-05
26	GO:0010313: phytochrome binding	8.78E-05
27	GO:0010291: carotene beta-ring hydroxylase activity	2.08E-04
28	GO:0000064: L-ornithine transmembrane transporter activity	2.08E-04
29	GO:0004512: inositol-3-phosphate synthase activity	2.08E-04
30	GO:0004106: chorismate mutase activity	2.08E-04
31	GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity	3.48E-04
32	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	5.01E-04
33	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	5.01E-04
34	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	5.01E-04
35	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	5.01E-04
36	GO:0004375: glycine dehydrogenase (decarboxylating) activity	5.01E-04
37	GO:0048027: mRNA 5'-UTR binding	5.01E-04
38	GO:0016757: transferase activity, transferring glycosyl groups	5.05E-04
39	GO:0008891: glycolate oxidase activity	6.66E-04
40	GO:0004301: epoxide hydrolase activity	6.66E-04
41	GO:0080032: methyl jasmonate esterase activity	6.66E-04
42	GO:0046527: glucosyltransferase activity	6.66E-04
43	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	6.67E-04
44	GO:0045547: dehydrodolichyl diphosphate synthase activity	8.44E-04
45	GO:0002094: polyprenyltransferase activity	8.44E-04
46	GO:0008194: UDP-glycosyltransferase activity	9.73E-04
47	GO:0016168: chlorophyll binding	9.88E-04
48	GO:0016208: AMP binding	1.03E-03
49	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	1.03E-03
50	GO:0016688: L-ascorbate peroxidase activity	1.03E-03
51	GO:0008519: ammonium transmembrane transporter activity	1.03E-03
52	GO:0080046: quercetin 4'-O-glucosyltransferase activity	1.03E-03
53	GO:0080030: methyl indole-3-acetate esterase activity	1.03E-03
54	GO:0008429: phosphatidylethanolamine binding	1.03E-03
55	GO:0102229: amylopectin maltohydrolase activity	1.03E-03
56	GO:0008195: phosphatidate phosphatase activity	1.23E-03
57	GO:0005085: guanyl-nucleotide exchange factor activity	1.44E-03
58	GO:0102425: myricetin 3-O-glucosyltransferase activity	1.44E-03
59	GO:0102360: daphnetin 3-O-glucosyltransferase activity	1.44E-03
60	GO:0004427: inorganic diphosphatase activity	1.44E-03
61	GO:0016621: cinnamoyl-CoA reductase activity	1.44E-03
62	GO:0047893: flavonol 3-O-glucosyltransferase activity	1.66E-03
63	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	1.89E-03
64	GO:0016207: 4-coumarate-CoA ligase activity	2.14E-03
65	GO:0030955: potassium ion binding	2.39E-03
66	GO:0004743: pyruvate kinase activity	2.39E-03
67	GO:0009672: auxin:proton symporter activity	2.39E-03
68	GO:0047372: acylglycerol lipase activity	2.93E-03
69	GO:0004860: protein kinase inhibitor activity	2.93E-03
70	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.37E-03
71	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.37E-03
72	GO:0010329: auxin efflux transmembrane transporter activity	3.50E-03
73	GO:0003824: catalytic activity	4.12E-03
74	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	4.42E-03
75	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	4.42E-03
76	GO:0031409: pigment binding	4.42E-03
77	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	4.42E-03
78	GO:0031418: L-ascorbic acid binding	4.74E-03
79	GO:0030170: pyridoxal phosphate binding	5.11E-03
80	GO:0004176: ATP-dependent peptidase activity	5.42E-03
81	GO:0035251: UDP-glucosyltransferase activity	5.42E-03
82	GO:0016491: oxidoreductase activity	5.44E-03
83	GO:0010181: FMN binding	8.02E-03
84	GO:0042802: identical protein binding	8.07E-03
85	GO:0004518: nuclease activity	9.24E-03
86	GO:0000287: magnesium ion binding	9.65E-03
87	GO:0046982: protein heterodimerization activity	9.65E-03
88	GO:0016788: hydrolase activity, acting on ester bonds	1.00E-02
89	GO:0016759: cellulose synthase activity	1.01E-02
90	GO:0008237: metallopeptidase activity	1.05E-02
91	GO:0008375: acetylglucosaminyltransferase activity	1.24E-02
92	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.24E-02
93	GO:0004683: calmodulin-dependent protein kinase activity	1.28E-02
94	GO:0004806: triglyceride lipase activity	1.28E-02
95	GO:0008236: serine-type peptidase activity	1.33E-02
96	GO:0052689: carboxylic ester hydrolase activity	1.35E-02
97	GO:0004222: metalloendopeptidase activity	1.48E-02
98	GO:0003993: acid phosphatase activity	1.68E-02
99	GO:0004185: serine-type carboxypeptidase activity	1.95E-02
100	GO:0051537: 2 iron, 2 sulfur cluster binding	2.06E-02
101	GO:0051287: NAD binding	2.24E-02
102	GO:0003690: double-stranded DNA binding	2.47E-02
103	GO:0004672: protein kinase activity	2.56E-02
104	GO:0045330: aspartyl esterase activity	2.60E-02
105	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.78E-02
106	GO:0016874: ligase activity	2.97E-02
107	GO:0030599: pectinesterase activity	2.97E-02
108	GO:0005515: protein binding	2.98E-02
109	GO:0016746: transferase activity, transferring acyl groups	3.17E-02
110	GO:0016758: transferase activity, transferring hexosyl groups	3.57E-02
111	GO:0016787: hydrolase activity	4.08E-02
112	GO:0046910: pectinesterase inhibitor activity	4.35E-02

Rank	GO Term	Adjusted P value
1	GO:0097708: intracellular vesicle	0.00E+00
2	GO:0031313: extrinsic component of endosome membrane	0.00E+00
3	GO:0009507: chloroplast	5.78E-08
4	GO:0031234: extrinsic component of cytoplasmic side of plasma membrane	8.78E-05
5	GO:0042406: extrinsic component of endoplasmic reticulum membrane	3.48E-04
6	GO:0009509: chromoplast	3.48E-04
7	GO:0005960: glycine cleavage complex	5.01E-04
8	GO:0010287: plastoglobule	5.31E-04
9	GO:0009523: photosystem II	6.17E-04
10	GO:0005779: integral component of peroxisomal membrane	1.89E-03
11	GO:0005764: lysosome	3.80E-03
12	GO:0030076: light-harvesting complex	4.10E-03
13	GO:0043234: protein complex	4.42E-03
14	GO:0009536: plastid	4.88E-03
15	GO:0009570: chloroplast stroma	6.77E-03
16	GO:0005783: endoplasmic reticulum	7.65E-03
17	GO:0005777: peroxisome	7.67E-03
18	GO:0009522: photosystem I	8.02E-03
19	GO:0071944: cell periphery	9.67E-03
20	GO:0005778: peroxisomal membrane	1.05E-02
21	GO:0009941: chloroplast envelope	1.17E-02
22	GO:0005743: mitochondrial inner membrane	1.68E-02
23	GO:0043231: intracellular membrane-bounded organelle	1.99E-02
24	GO:0000139: Golgi membrane	2.31E-02
25	GO:0005834: heterotrimeric G-protein complex	2.84E-02
26	GO:0009543: chloroplast thylakoid lumen	3.64E-02
27	GO:0016020: membrane	3.80E-02
28	GO:0009534: chloroplast thylakoid	3.87E-02
29	GO:0009535: chloroplast thylakoid membrane	4.31E-02
30	GO:0009705: plant-type vacuole membrane	4.58E-02
31	GO:0005829: cytosol	4.75E-02