co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G38020

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1900490: positive regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity	0.00E+00
2	GO:0060560: developmental growth involved in morphogenesis	0.00E+00
3	GO:0010793: regulation of mRNA export from nucleus	0.00E+00
4	GO:0048867: stem cell fate determination	0.00E+00
5	GO:0070291: N-acylethanolamine metabolic process	0.00E+00
6	GO:0010606: positive regulation of cytoplasmic mRNA processing body assembly	0.00E+00
7	GO:1905168: positive regulation of double-strand break repair via homologous recombination	0.00E+00
8	GO:0010111: glyoxysome organization	0.00E+00
9	GO:2001253: regulation of histone H3-K36 trimethylation	0.00E+00
10	GO:0046167: glycerol-3-phosphate biosynthetic process	5.94E-05
11	GO:0009966: regulation of signal transduction	5.94E-05
12	GO:0034063: stress granule assembly	5.94E-05
13	GO:0010603: regulation of cytoplasmic mRNA processing body assembly	5.94E-05
14	GO:0015760: glucose-6-phosphate transport	5.94E-05
15	GO:0010152: pollen maturation	8.25E-05
16	GO:0019395: fatty acid oxidation	1.44E-04
17	GO:0015914: phospholipid transport	1.44E-04
18	GO:0050684: regulation of mRNA processing	1.44E-04
19	GO:0006641: triglyceride metabolic process	1.44E-04
20	GO:0009695: jasmonic acid biosynthetic process	1.75E-04
21	GO:0030433: ubiquitin-dependent ERAD pathway	2.14E-04
22	GO:0015714: phosphoenolpyruvate transport	2.46E-04
23	GO:0019563: glycerol catabolic process	2.46E-04
24	GO:0032784: regulation of DNA-templated transcription, elongation	2.46E-04
25	GO:0035436: triose phosphate transmembrane transport	2.46E-04
26	GO:0045739: positive regulation of DNA repair	2.46E-04
27	GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process	2.46E-04
28	GO:0009663: plasmodesma organization	2.46E-04
29	GO:0006072: glycerol-3-phosphate metabolic process	3.57E-04
30	GO:0006635: fatty acid beta-oxidation	4.00E-04
31	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	4.78E-04
32	GO:0010188: response to microbial phytotoxin	4.78E-04
33	GO:0006646: phosphatidylethanolamine biosynthetic process	4.78E-04
34	GO:0015713: phosphoglycerate transport	4.78E-04
35	GO:1990937: xylan acetylation	4.78E-04
36	GO:0006656: phosphatidylcholine biosynthetic process	6.05E-04
37	GO:0043097: pyrimidine nucleoside salvage	6.05E-04
38	GO:0045491: xylan metabolic process	7.40E-04
39	GO:0006751: glutathione catabolic process	7.40E-04
40	GO:0006206: pyrimidine nucleobase metabolic process	7.40E-04
41	GO:0033962: cytoplasmic mRNA processing body assembly	8.82E-04
42	GO:0017148: negative regulation of translation	8.82E-04
43	GO:0016444: somatic cell DNA recombination	8.82E-04
44	GO:0034389: lipid particle organization	8.82E-04
45	GO:0010078: maintenance of root meristem identity	1.18E-03
46	GO:0006875: cellular metal ion homeostasis	1.18E-03
47	GO:0071482: cellular response to light stimulus	1.35E-03
48	GO:0010345: suberin biosynthetic process	1.52E-03
49	GO:0006298: mismatch repair	1.88E-03
50	GO:0010215: cellulose microfibril organization	1.88E-03
51	GO:0009742: brassinosteroid mediated signaling pathway	2.35E-03
52	GO:0010143: cutin biosynthetic process	2.68E-03
53	GO:0002237: response to molecule of bacterial origin	2.68E-03
54	GO:0007033: vacuole organization	2.89E-03
55	GO:0010025: wax biosynthetic process	3.11E-03
56	GO:0006289: nucleotide-excision repair	3.34E-03
57	GO:2000377: regulation of reactive oxygen species metabolic process	3.34E-03
58	GO:0006338: chromatin remodeling	3.34E-03
59	GO:0010073: meristem maintenance	3.57E-03
60	GO:0008299: isoprenoid biosynthetic process	3.57E-03
61	GO:0006874: cellular calcium ion homeostasis	3.57E-03
62	GO:0031408: oxylipin biosynthetic process	3.81E-03
63	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	4.30E-03
64	GO:0045492: xylan biosynthetic process	4.55E-03
65	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	4.81E-03
66	GO:0000413: protein peptidyl-prolyl isomerization	5.07E-03
67	GO:0042335: cuticle development	5.07E-03
68	GO:0010182: sugar mediated signaling pathway	5.34E-03
69	GO:0009749: response to glucose	5.89E-03
70	GO:0008654: phospholipid biosynthetic process	5.89E-03
71	GO:0071281: cellular response to iron ion	6.75E-03
72	GO:0051607: defense response to virus	7.65E-03
73	GO:0001666: response to hypoxia	7.97E-03
74	GO:0042742: defense response to bacterium	8.15E-03
75	GO:0009816: defense response to bacterium, incompatible interaction	8.28E-03
76	GO:0030244: cellulose biosynthetic process	9.59E-03
77	GO:0008219: cell death	9.59E-03
78	GO:0009817: defense response to fungus, incompatible interaction	9.59E-03
79	GO:0006499: N-terminal protein myristoylation	1.03E-02
80	GO:0009834: plant-type secondary cell wall biogenesis	1.03E-02
81	GO:0006281: DNA repair	1.07E-02
82	GO:0006897: endocytosis	1.28E-02
83	GO:0000209: protein polyubiquitination	1.39E-02
84	GO:0009846: pollen germination	1.59E-02
85	GO:0009738: abscisic acid-activated signaling pathway	1.85E-02
86	GO:0016569: covalent chromatin modification	2.06E-02
87	GO:0009553: embryo sac development	2.10E-02
88	GO:0009737: response to abscisic acid	2.13E-02
89	GO:0009624: response to nematode	2.15E-02
90	GO:0016310: phosphorylation	2.54E-02
91	GO:0009058: biosynthetic process	2.62E-02
92	GO:0009845: seed germination	2.67E-02
93	GO:0006633: fatty acid biosynthetic process	2.97E-02
94	GO:0016036: cellular response to phosphate starvation	3.02E-02
95	GO:0040008: regulation of growth	3.07E-02
96	GO:0010150: leaf senescence	3.17E-02
97	GO:0010228: vegetative to reproductive phase transition of meristem	3.28E-02
98	GO:0009617: response to bacterium	3.60E-02
99	GO:0009826: unidimensional cell growth	4.21E-02
100	GO:0006970: response to osmotic stress	4.56E-02
101	GO:0007049: cell cycle	4.68E-02
102	GO:0009723: response to ethylene	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0103073: anandamide amidohydrolase activity	0.00E+00
2	GO:0102077: oleamide hydrolase activity	0.00E+00
3	GO:0004370: glycerol kinase activity	0.00E+00
4	GO:0047412: N-(long-chain-acyl)ethanolamine deacylase activity	0.00E+00
5	GO:0017168: 5-oxoprolinase (ATP-hydrolyzing) activity	0.00E+00
6	GO:0004491: methylmalonate-semialdehyde dehydrogenase (acylating) activity	0.00E+00
7	GO:0034450: ubiquitin-ubiquitin ligase activity	5.94E-05
8	GO:0019707: protein-cysteine S-acyltransferase activity	5.94E-05
9	GO:0008692: 3-hydroxybutyryl-CoA epimerase activity	5.94E-05
10	GO:0019888: protein phosphatase regulator activity	9.56E-05
11	GO:0019200: carbohydrate kinase activity	1.44E-04
12	GO:0004609: phosphatidylserine decarboxylase activity	1.44E-04
13	GO:0015152: glucose-6-phosphate transmembrane transporter activity	1.44E-04
14	GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity	1.44E-04
15	GO:0003988: acetyl-CoA C-acyltransferase activity	1.44E-04
16	GO:0071917: triose-phosphate transmembrane transporter activity	2.46E-04
17	GO:0019829: cation-transporting ATPase activity	2.46E-04
18	GO:0004165: dodecenoyl-CoA delta-isomerase activity	3.57E-04
19	GO:0004300: enoyl-CoA hydratase activity	3.57E-04
20	GO:0008526: phosphatidylinositol transporter activity	4.78E-04
21	GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway	4.78E-04
22	GO:0015120: phosphoglycerate transmembrane transporter activity	4.78E-04
23	GO:0004040: amidase activity	6.05E-04
24	GO:0004849: uridine kinase activity	8.82E-04
25	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	1.69E-03
26	GO:0000976: transcription regulatory region sequence-specific DNA binding	2.27E-03
27	GO:0005315: inorganic phosphate transmembrane transporter activity	2.47E-03
28	GO:0005388: calcium-transporting ATPase activity	2.47E-03
29	GO:0016887: ATPase activity	2.81E-03
30	GO:0000166: nucleotide binding	3.33E-03
31	GO:0043424: protein histidine kinase binding	3.57E-03
32	GO:0019706: protein-cysteine S-palmitoyltransferase activity	3.81E-03
33	GO:0003684: damaged DNA binding	7.05E-03
34	GO:0005096: GTPase activator activity	9.93E-03
35	GO:0003697: single-stranded DNA binding	1.13E-02
36	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.20E-02
37	GO:0042393: histone binding	1.24E-02
38	GO:0003729: mRNA binding	1.35E-02
39	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.51E-02
40	GO:0004386: helicase activity	2.29E-02
41	GO:0005507: copper ion binding	2.72E-02
42	GO:0015297: antiporter activity	3.07E-02
43	GO:0005509: calcium ion binding	3.57E-02
44	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.76E-02
45	GO:0003682: chromatin binding	4.50E-02

Rank	GO Term	Adjusted P value
1	GO:0071942: XPC complex	0.00E+00
2	GO:0000111: nucleotide-excision repair factor 2 complex	0.00E+00
3	GO:0031011: Ino80 complex	6.05E-04
4	GO:0030131: clathrin adaptor complex	1.18E-03
5	GO:0009514: glyoxysome	1.35E-03
6	GO:0010494: cytoplasmic stress granule	1.52E-03
7	GO:0030125: clathrin vesicle coat	1.88E-03
8	GO:0000159: protein phosphatase type 2A complex	2.07E-03
9	GO:0030176: integral component of endoplasmic reticulum membrane	2.89E-03
10	GO:0005905: clathrin-coated pit	3.81E-03
11	GO:0005794: Golgi apparatus	5.92E-03
12	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	6.43E-03
13	GO:0000932: P-body	7.97E-03
14	GO:0000151: ubiquitin ligase complex	9.59E-03
15	GO:0015934: large ribosomal subunit	1.06E-02
16	GO:0000139: Golgi membrane	1.20E-02
17	GO:0005789: endoplasmic reticulum membrane	1.40E-02
18	GO:0005834: heterotrimeric G-protein complex	1.97E-02
19	GO:0005777: peroxisome	2.20E-02
20	GO:0009543: chloroplast thylakoid lumen	2.52E-02
21	GO:0005783: endoplasmic reticulum	3.03E-02
22	GO:0005802: trans-Golgi network	3.06E-02
23	GO:0005829: cytosol	3.09E-02
24	GO:0005768: endosome	3.48E-02
25	GO:0005886: plasma membrane	4.41E-02