Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G37520

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0005997: xylulose metabolic process0.00E+00
2GO:1903428: positive regulation of reactive oxygen species biosynthetic process0.00E+00
3GO:0042906: xanthine transport0.00E+00
4GO:0000390: spliceosomal complex disassembly0.00E+00
5GO:0043171: peptide catabolic process0.00E+00
6GO:0030644: cellular chloride ion homeostasis0.00E+00
7GO:0010378: temperature compensation of the circadian clock0.00E+00
8GO:0009409: response to cold5.76E-08
9GO:0009645: response to low light intensity stimulus5.63E-06
10GO:0007623: circadian rhythm3.93E-05
11GO:0000380: alternative mRNA splicing, via spliceosome9.74E-05
12GO:0018298: protein-chromophore linkage1.03E-04
13GO:0010218: response to far red light1.23E-04
14GO:0009768: photosynthesis, light harvesting in photosystem I1.36E-04
15GO:0009644: response to high light intensity2.77E-04
16GO:1990641: response to iron ion starvation3.09E-04
17GO:1902265: abscisic acid homeostasis3.09E-04
18GO:0015812: gamma-aminobutyric acid transport3.09E-04
19GO:0032958: inositol phosphate biosynthetic process3.09E-04
20GO:0009414: response to water deprivation5.05E-04
21GO:0010286: heat acclimation5.71E-04
22GO:0009641: shade avoidance6.45E-04
23GO:0009257: 10-formyltetrahydrofolate biosynthetic process6.76E-04
24GO:0015720: allantoin transport6.76E-04
25GO:0006611: protein export from nucleus6.76E-04
26GO:0006883: cellular sodium ion homeostasis6.76E-04
27GO:0015857: uracil transport6.76E-04
28GO:1902884: positive regulation of response to oxidative stress6.76E-04
29GO:0006101: citrate metabolic process6.76E-04
30GO:0051170: nuclear import6.76E-04
31GO:0030003: cellular cation homeostasis6.76E-04
32GO:0009817: defense response to fungus, incompatible interaction9.23E-04
33GO:0006811: ion transport1.04E-03
34GO:0071705: nitrogen compound transport1.10E-03
35GO:0030029: actin filament-based process1.10E-03
36GO:0000055: ribosomal large subunit export from nucleus1.10E-03
37GO:0042256: mature ribosome assembly1.10E-03
38GO:0042344: indole glucosinolate catabolic process1.10E-03
39GO:0006954: inflammatory response1.10E-03
40GO:1901562: response to paraquat1.10E-03
41GO:0006598: polyamine catabolic process1.10E-03
42GO:0009637: response to blue light1.24E-03
43GO:0009416: response to light stimulus1.40E-03
44GO:0006882: cellular zinc ion homeostasis1.57E-03
45GO:0006020: inositol metabolic process1.57E-03
46GO:0010601: positive regulation of auxin biosynthetic process1.57E-03
47GO:0009113: purine nucleobase biosynthetic process1.57E-03
48GO:0015749: monosaccharide transport1.57E-03
49GO:1901332: negative regulation of lateral root development1.57E-03
50GO:0009963: positive regulation of flavonoid biosynthetic process1.57E-03
51GO:0042542: response to hydrogen peroxide1.62E-03
52GO:0010114: response to red light1.71E-03
53GO:0048511: rhythmic process1.80E-03
54GO:0009269: response to desiccation1.80E-03
55GO:0006646: phosphatidylethanolamine biosynthetic process2.11E-03
56GO:0009687: abscisic acid metabolic process2.11E-03
57GO:0015743: malate transport2.11E-03
58GO:0009765: photosynthesis, light harvesting2.11E-03
59GO:1901002: positive regulation of response to salt stress2.11E-03
60GO:0030104: water homeostasis2.11E-03
61GO:1901409: positive regulation of phosphorylation of RNA polymerase II C-terminal domain2.11E-03
62GO:0010600: regulation of auxin biosynthetic process2.11E-03
63GO:0006878: cellular copper ion homeostasis2.11E-03
64GO:0071215: cellular response to abscisic acid stimulus2.15E-03
65GO:0007029: endoplasmic reticulum organization2.69E-03
66GO:0048578: positive regulation of long-day photoperiodism, flowering2.69E-03
67GO:0016926: protein desumoylation2.69E-03
68GO:0043097: pyrimidine nucleoside salvage2.69E-03
69GO:0006814: sodium ion transport3.16E-03
70GO:0042752: regulation of circadian rhythm3.16E-03
71GO:0009737: response to abscisic acid3.27E-03
72GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation3.32E-03
73GO:0042732: D-xylose metabolic process3.32E-03
74GO:0006206: pyrimidine nucleobase metabolic process3.32E-03
75GO:0000741: karyogamy3.32E-03
76GO:0006970: response to osmotic stress3.40E-03
77GO:0006635: fatty acid beta-oxidation3.63E-03
78GO:0009651: response to salt stress3.67E-03
79GO:0009861: jasmonic acid and ethylene-dependent systemic resistance4.00E-03
80GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity4.00E-03
81GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity4.00E-03
82GO:0010244: response to low fluence blue light stimulus by blue low-fluence system4.00E-03
83GO:0031930: mitochondria-nucleus signaling pathway4.00E-03
84GO:0080167: response to karrikin4.21E-03
85GO:0010038: response to metal ion4.72E-03
86GO:0010044: response to aluminum ion4.72E-03
87GO:0098869: cellular oxidant detoxification4.72E-03
88GO:0009395: phospholipid catabolic process4.72E-03
89GO:0048437: floral organ development4.72E-03
90GO:0009769: photosynthesis, light harvesting in photosystem II4.72E-03
91GO:0009396: folic acid-containing compound biosynthetic process4.72E-03
92GO:0006102: isocitrate metabolic process5.48E-03
93GO:0009061: anaerobic respiration5.48E-03
94GO:0010928: regulation of auxin mediated signaling pathway5.48E-03
95GO:0009819: drought recovery5.48E-03
96GO:0009415: response to water5.48E-03
97GO:0010078: maintenance of root meristem identity5.48E-03
98GO:0032508: DNA duplex unwinding5.48E-03
99GO:0035556: intracellular signal transduction5.66E-03
100GO:0006950: response to stress6.18E-03
101GO:0010099: regulation of photomorphogenesis6.28E-03
102GO:0009827: plant-type cell wall modification6.28E-03
103GO:0001510: RNA methylation6.28E-03
104GO:0006098: pentose-phosphate shunt7.12E-03
105GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay7.12E-03
106GO:0090333: regulation of stomatal closure7.12E-03
107GO:0046916: cellular transition metal ion homeostasis7.12E-03
108GO:0000160: phosphorelay signal transduction system7.20E-03
109GO:0010043: response to zinc ion7.93E-03
110GO:0009631: cold acclimation7.93E-03
111GO:0035999: tetrahydrofolate interconversion8.01E-03
112GO:0048354: mucilage biosynthetic process involved in seed coat development8.01E-03
113GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway8.01E-03
114GO:0008202: steroid metabolic process8.01E-03
115GO:0007165: signal transduction8.67E-03
116GO:0045087: innate immune response8.69E-03
117GO:0055062: phosphate ion homeostasis8.92E-03
118GO:0009970: cellular response to sulfate starvation8.92E-03
119GO:0006995: cellular response to nitrogen starvation8.92E-03
120GO:0006099: tricarboxylic acid cycle9.09E-03
121GO:0010468: regulation of gene expression9.83E-03
122GO:0006816: calcium ion transport9.88E-03
123GO:0009682: induced systemic resistance9.88E-03
124GO:0052544: defense response by callose deposition in cell wall9.88E-03
125GO:0016925: protein sumoylation1.09E-02
126GO:0009640: photomorphogenesis1.12E-02
127GO:0050826: response to freezing1.19E-02
128GO:0009718: anthocyanin-containing compound biosynthetic process1.19E-02
129GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process1.19E-02
130GO:2000012: regulation of auxin polar transport1.19E-02
131GO:0008643: carbohydrate transport1.22E-02
132GO:0009266: response to temperature stimulus1.30E-02
133GO:0007034: vacuolar transport1.30E-02
134GO:0000165: MAPK cascade1.36E-02
135GO:0010030: positive regulation of seed germination1.40E-02
136GO:0019853: L-ascorbic acid biosynthetic process1.40E-02
137GO:0009585: red, far-red light phototransduction1.52E-02
138GO:0051603: proteolysis involved in cellular protein catabolic process1.57E-02
139GO:0009735: response to cytokinin1.58E-02
140GO:0045333: cellular respiration1.63E-02
141GO:0006857: oligopeptide transport1.63E-02
142GO:0006406: mRNA export from nucleus1.63E-02
143GO:0009738: abscisic acid-activated signaling pathway1.72E-02
144GO:0006355: regulation of transcription, DNA-templated1.74E-02
145GO:0016575: histone deacetylation1.75E-02
146GO:0006874: cellular calcium ion homeostasis1.75E-02
147GO:0009695: jasmonic acid biosynthetic process1.75E-02
148GO:0010431: seed maturation1.87E-02
149GO:0003333: amino acid transmembrane transport1.87E-02
150GO:0019748: secondary metabolic process2.00E-02
151GO:0010017: red or far-red light signaling pathway2.00E-02
152GO:0006012: galactose metabolic process2.12E-02
153GO:0009693: ethylene biosynthetic process2.12E-02
154GO:0015979: photosynthesis2.13E-02
155GO:0006396: RNA processing2.23E-02
156GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.39E-02
157GO:0010501: RNA secondary structure unwinding2.52E-02
158GO:0010051: xylem and phloem pattern formation2.52E-02
159GO:0042631: cellular response to water deprivation2.52E-02
160GO:0080022: primary root development2.52E-02
161GO:0042391: regulation of membrane potential2.52E-02
162GO:0010197: polar nucleus fusion2.66E-02
163GO:0046323: glucose import2.66E-02
164GO:0048544: recognition of pollen2.80E-02
165GO:0006511: ubiquitin-dependent protein catabolic process2.85E-02
166GO:0009408: response to heat2.93E-02
167GO:0008654: phospholipid biosynthetic process2.95E-02
168GO:0009556: microsporogenesis2.95E-02
169GO:1901657: glycosyl compound metabolic process3.39E-02
170GO:0005975: carbohydrate metabolic process3.53E-02
171GO:0019760: glucosinolate metabolic process3.55E-02
172GO:0010252: auxin homeostasis3.55E-02
173GO:0010228: vegetative to reproductive phase transition of meristem3.91E-02
174GO:0001666: response to hypoxia4.02E-02
175GO:0009911: positive regulation of flower development4.02E-02
176GO:0055114: oxidation-reduction process4.04E-02
177GO:0009788: negative regulation of abscisic acid-activated signaling pathway4.18E-02
178GO:0010029: regulation of seed germination4.18E-02
179GO:0009617: response to bacterium4.45E-02
180GO:0015995: chlorophyll biosynthetic process4.51E-02
181GO:0048573: photoperiodism, flowering4.51E-02
182GO:0016567: protein ubiquitination4.67E-02
183GO:0006508: proteolysis4.75E-02
184GO:0048481: plant ovule development4.85E-02
RankGO TermAdjusted P value
1GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity0.00E+00
2GO:0016428: tRNA (cytosine-5-)-methyltransferase activity0.00E+00
3GO:0047668: amygdalin beta-glucosidase activity0.00E+00
4GO:0019912: cyclin-dependent protein kinase activating kinase activity0.00E+00
5GO:1990446: U1 snRNP binding0.00E+00
6GO:0080083: beta-gentiobiose beta-glucosidase activity0.00E+00
7GO:0005272: sodium channel activity0.00E+00
8GO:0047205: quinate O-hydroxycinnamoyltransferase activity0.00E+00
9GO:0030504: inorganic diphosphate transmembrane transporter activity0.00E+00
10GO:0042907: xanthine transmembrane transporter activity0.00E+00
11GO:0010349: L-galactose dehydrogenase activity0.00E+00
12GO:0047172: shikimate O-hydroxycinnamoyltransferase activity0.00E+00
13GO:0047787: delta4-3-oxosteroid 5beta-reductase activity0.00E+00
14GO:0009045: xylose isomerase activity0.00E+00
15GO:0080082: esculin beta-glucosidase activity0.00E+00
16GO:0005358: high-affinity hydrogen:glucose symporter activity0.00E+00
17GO:0004567: beta-mannosidase activity0.00E+00
18GO:0005253: anion channel activity6.18E-05
19GO:0031409: pigment binding1.00E-04
20GO:0033857: diphosphoinositol-pentakisphosphate kinase activity3.09E-04
21GO:0009679: hexose:proton symporter activity3.09E-04
22GO:0035671: enone reductase activity3.09E-04
23GO:0000829: inositol heptakisphosphate kinase activity3.09E-04
24GO:0010013: N-1-naphthylphthalamic acid binding3.09E-04
25GO:0080079: cellobiose glucosidase activity3.09E-04
26GO:0008692: 3-hydroxybutyryl-CoA epimerase activity3.09E-04
27GO:0046870: cadmium ion binding3.09E-04
28GO:0004856: xylulokinase activity3.09E-04
29GO:0004112: cyclic-nucleotide phosphodiesterase activity3.09E-04
30GO:0070006: metalloaminopeptidase activity3.09E-04
31GO:0000828: inositol hexakisphosphate kinase activity3.09E-04
32GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity3.09E-04
33GO:0015185: gamma-aminobutyric acid transmembrane transporter activity3.09E-04
34GO:0004525: ribonuclease III activity3.17E-04
35GO:0000989: transcription factor activity, transcription factor binding4.68E-04
36GO:0001047: core promoter binding6.76E-04
37GO:0032791: lead ion binding6.76E-04
38GO:0005274: allantoin uptake transmembrane transporter activity6.76E-04
39GO:0004609: phosphatidylserine decarboxylase activity6.76E-04
40GO:0047216: inositol 3-alpha-galactosyltransferase activity6.76E-04
41GO:0003994: aconitate hydratase activity6.76E-04
42GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity6.76E-04
43GO:0004477: methenyltetrahydrofolate cyclohydrolase activity6.76E-04
44GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity6.76E-04
45GO:0004839: ubiquitin activating enzyme activity6.76E-04
46GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity6.76E-04
47GO:0004329: formate-tetrahydrofolate ligase activity6.76E-04
48GO:0015180: L-alanine transmembrane transporter activity6.76E-04
49GO:0016168: chlorophyll binding7.10E-04
50GO:0004177: aminopeptidase activity7.44E-04
51GO:0004096: catalase activity1.10E-03
52GO:0046592: polyamine oxidase activity1.10E-03
53GO:0019948: SUMO activating enzyme activity1.10E-03
54GO:0017150: tRNA dihydrouridine synthase activity1.10E-03
55GO:0043023: ribosomal large subunit binding1.57E-03
56GO:0004165: dodecenoyl-CoA delta-isomerase activity1.57E-03
57GO:0004300: enoyl-CoA hydratase activity1.57E-03
58GO:0015189: L-lysine transmembrane transporter activity1.57E-03
59GO:0048027: mRNA 5'-UTR binding1.57E-03
60GO:0004108: citrate (Si)-synthase activity1.57E-03
61GO:0015181: arginine transmembrane transporter activity1.57E-03
62GO:0019706: protein-cysteine S-palmitoyltransferase activity1.80E-03
63GO:0004707: MAP kinase activity1.80E-03
64GO:0004737: pyruvate decarboxylase activity2.11E-03
65GO:0015210: uracil transmembrane transporter activity2.11E-03
66GO:0005313: L-glutamate transmembrane transporter activity2.11E-03
67GO:0042277: peptide binding2.11E-03
68GO:0009916: alternative oxidase activity2.11E-03
69GO:0016929: SUMO-specific protease activity2.69E-03
70GO:0010294: abscisic acid glucosyltransferase activity2.69E-03
71GO:0015145: monosaccharide transmembrane transporter activity2.69E-03
72GO:0008641: small protein activating enzyme activity2.69E-03
73GO:0045300: acyl-[acyl-carrier-protein] desaturase activity2.69E-03
74GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen2.69E-03
75GO:0016773: phosphotransferase activity, alcohol group as acceptor2.69E-03
76GO:0005247: voltage-gated chloride channel activity3.32E-03
77GO:0030976: thiamine pyrophosphate binding3.32E-03
78GO:0004629: phospholipase C activity3.32E-03
79GO:0019137: thioglucosidase activity3.32E-03
80GO:0015562: efflux transmembrane transporter activity3.32E-03
81GO:0000293: ferric-chelate reductase activity3.32E-03
82GO:0004849: uridine kinase activity4.00E-03
83GO:0070300: phosphatidic acid binding4.00E-03
84GO:0004602: glutathione peroxidase activity4.00E-03
85GO:0004435: phosphatidylinositol phospholipase C activity4.00E-03
86GO:0005261: cation channel activity4.00E-03
87GO:0000156: phosphorelay response regulator activity4.14E-03
88GO:0016831: carboxy-lyase activity4.72E-03
89GO:0009881: photoreceptor activity4.72E-03
90GO:0015140: malate transmembrane transporter activity4.72E-03
91GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen5.38E-03
92GO:0004033: aldo-keto reductase (NADP) activity5.48E-03
93GO:0008270: zinc ion binding6.11E-03
94GO:0102483: scopolin beta-glucosidase activity6.18E-03
95GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity6.28E-03
96GO:0005267: potassium channel activity6.28E-03
97GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)6.28E-03
98GO:0046872: metal ion binding6.36E-03
99GO:0005215: transporter activity6.90E-03
100GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity7.12E-03
101GO:0005515: protein binding7.22E-03
102GO:0004693: cyclin-dependent protein serine/threonine kinase activity7.56E-03
103GO:0005351: sugar:proton symporter activity7.62E-03
104GO:0050897: cobalt ion binding7.93E-03
105GO:0008422: beta-glucosidase activity9.50E-03
106GO:0005315: inorganic phosphate transmembrane transporter activity1.19E-02
107GO:0005262: calcium channel activity1.19E-02
108GO:0004565: beta-galactosidase activity1.19E-02
109GO:0008081: phosphoric diester hydrolase activity1.19E-02
110GO:0016301: kinase activity1.26E-02
111GO:0031624: ubiquitin conjugating enzyme binding1.30E-02
112GO:0004175: endopeptidase activity1.30E-02
113GO:0008131: primary amine oxidase activity1.30E-02
114GO:0005217: intracellular ligand-gated ion channel activity1.40E-02
115GO:0030552: cAMP binding1.40E-02
116GO:0030553: cGMP binding1.40E-02
117GO:0004970: ionotropic glutamate receptor activity1.40E-02
118GO:0004407: histone deacetylase activity1.63E-02
119GO:0008234: cysteine-type peptidase activity1.68E-02
120GO:0043424: protein histidine kinase binding1.75E-02
121GO:0005216: ion channel activity1.75E-02
122GO:0008324: cation transmembrane transporter activity1.75E-02
123GO:0004497: monooxygenase activity1.80E-02
124GO:0008514: organic anion transmembrane transporter activity2.25E-02
125GO:0005249: voltage-gated potassium channel activity2.52E-02
126GO:0030551: cyclic nucleotide binding2.52E-02
127GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity2.66E-02
128GO:0004842: ubiquitin-protein transferase activity3.02E-02
129GO:0015144: carbohydrate transmembrane transporter activity3.24E-02
130GO:0004197: cysteine-type endopeptidase activity3.24E-02
131GO:0015297: antiporter activity3.57E-02
132GO:0005200: structural constituent of cytoskeleton3.70E-02
133GO:0030247: polysaccharide binding4.51E-02
RankGO TermAdjusted P value
1GO:0031981: nuclear lumen0.00E+00
2GO:0071008: U2-type post-mRNA release spliceosomal complex0.00E+00
3GO:0005777: peroxisome2.81E-06
4GO:0016021: integral component of membrane2.98E-05
5GO:0030076: light-harvesting complex8.48E-05
6GO:0009522: photosystem I3.43E-04
7GO:0010287: plastoglobule8.84E-04
8GO:0005829: cytosol1.07E-03
9GO:0000323: lytic vacuole1.57E-03
10GO:0005773: vacuole1.96E-03
11GO:0009898: cytoplasmic side of plasma membrane2.11E-03
12GO:0032586: protein storage vacuole membrane2.11E-03
13GO:0009517: PSII associated light-harvesting complex II2.11E-03
14GO:0005851: eukaryotic translation initiation factor 2B complex3.32E-03
15GO:0034707: chloride channel complex3.32E-03
16GO:0009523: photosystem II3.39E-03
17GO:0000815: ESCRT III complex4.00E-03
18GO:0005886: plasma membrane4.14E-03
19GO:0000326: protein storage vacuole6.28E-03
20GO:0000307: cyclin-dependent protein kinase holoenzyme complex6.28E-03
21GO:0031090: organelle membrane7.12E-03
22GO:0016020: membrane8.17E-03
23GO:0005764: lysosome1.30E-02
24GO:0031966: mitochondrial membrane1.41E-02
25GO:0070469: respiratory chain1.75E-02
26GO:0016607: nuclear speck1.86E-02
27GO:0005783: endoplasmic reticulum2.26E-02
28GO:0009579: thylakoid2.36E-02
29GO:0005774: vacuolar membrane2.52E-02
30GO:0009506: plasmodesma2.58E-02
31GO:0048046: apoplast2.78E-02
32GO:0005737: cytoplasm2.79E-02
33GO:0031965: nuclear membrane2.95E-02
34GO:0005618: cell wall3.31E-02
35GO:0009705: plant-type vacuole membrane3.74E-02
36GO:0005622: intracellular4.21E-02
37GO:0000151: ubiquitin ligase complex4.85E-02
Gene type



Gene DE type