Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G36380

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0033587: shikimate biosynthetic process0.00E+00
2GO:0010398: xylogalacturonan metabolic process0.00E+00
3GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
4GO:0006182: cGMP biosynthetic process0.00E+00
5GO:0009448: gamma-aminobutyric acid metabolic process0.00E+00
6GO:1901535: regulation of DNA demethylation0.00E+00
7GO:0006105: succinate metabolic process0.00E+00
8GO:0019484: beta-alanine catabolic process0.00E+00
9GO:0019481: L-alanine catabolic process, by transamination0.00E+00
10GO:0046686: response to cadmium ion4.92E-11
11GO:0009617: response to bacterium2.07E-06
12GO:0000162: tryptophan biosynthetic process1.50E-05
13GO:0009851: auxin biosynthetic process6.86E-05
14GO:0006540: glutamate decarboxylation to succinate1.31E-04
15GO:0035266: meristem growth1.31E-04
16GO:0009450: gamma-aminobutyric acid catabolic process1.31E-04
17GO:0007292: female gamete generation1.31E-04
18GO:0009623: response to parasitic fungus1.31E-04
19GO:0010941: regulation of cell death1.31E-04
20GO:0010726: positive regulation of hydrogen peroxide metabolic process1.31E-04
21GO:0071366: cellular response to indolebutyric acid stimulus1.31E-04
22GO:0009865: pollen tube adhesion1.31E-04
23GO:0009817: defense response to fungus, incompatible interaction1.92E-04
24GO:0009682: induced systemic resistance2.24E-04
25GO:0052544: defense response by callose deposition in cell wall2.24E-04
26GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine3.03E-04
27GO:2000693: positive regulation of seed maturation3.03E-04
28GO:0019441: tryptophan catabolic process to kynurenine3.03E-04
29GO:0009257: 10-formyltetrahydrofolate biosynthetic process3.03E-04
30GO:0010033: response to organic substance3.03E-04
31GO:0002215: defense response to nematode3.03E-04
32GO:0051788: response to misfolded protein3.03E-04
33GO:0015865: purine nucleotide transport3.03E-04
34GO:0042256: mature ribosome assembly4.99E-04
35GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway4.99E-04
36GO:0060968: regulation of gene silencing4.99E-04
37GO:0042344: indole glucosinolate catabolic process4.99E-04
38GO:1902626: assembly of large subunit precursor of preribosome4.99E-04
39GO:0016998: cell wall macromolecule catabolic process5.61E-04
40GO:0031408: oxylipin biosynthetic process5.61E-04
41GO:0001676: long-chain fatty acid metabolic process7.14E-04
42GO:0010116: positive regulation of abscisic acid biosynthetic process7.14E-04
43GO:0048194: Golgi vesicle budding7.14E-04
44GO:0006020: inositol metabolic process7.14E-04
45GO:0046902: regulation of mitochondrial membrane permeability7.14E-04
46GO:0009113: purine nucleobase biosynthetic process7.14E-04
47GO:0006536: glutamate metabolic process9.47E-04
48GO:0010600: regulation of auxin biosynthetic process9.47E-04
49GO:0000460: maturation of 5.8S rRNA9.47E-04
50GO:0042991: transcription factor import into nucleus9.47E-04
51GO:0006564: L-serine biosynthetic process1.20E-03
52GO:0030308: negative regulation of cell growth1.20E-03
53GO:0006090: pyruvate metabolic process1.20E-03
54GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly1.47E-03
55GO:0010942: positive regulation of cell death1.47E-03
56GO:0015691: cadmium ion transport1.47E-03
57GO:0048827: phyllome development1.47E-03
58GO:0048232: male gamete generation1.47E-03
59GO:0000470: maturation of LSU-rRNA1.47E-03
60GO:0043248: proteasome assembly1.47E-03
61GO:0055114: oxidation-reduction process1.52E-03
62GO:0001666: response to hypoxia1.58E-03
63GO:0009627: systemic acquired resistance1.76E-03
64GO:0000054: ribosomal subunit export from nucleus1.76E-03
65GO:1902074: response to salt2.06E-03
66GO:0080027: response to herbivore2.06E-03
67GO:0006614: SRP-dependent cotranslational protein targeting to membrane2.06E-03
68GO:0071669: plant-type cell wall organization or biogenesis2.06E-03
69GO:0042742: defense response to bacterium2.06E-03
70GO:0009396: folic acid-containing compound biosynthetic process2.06E-03
71GO:0010311: lateral root formation2.15E-03
72GO:0006605: protein targeting2.39E-03
73GO:0010078: maintenance of root meristem identity2.39E-03
74GO:0016559: peroxisome fission2.39E-03
75GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline2.39E-03
76GO:0045087: innate immune response2.59E-03
77GO:0044030: regulation of DNA methylation2.73E-03
78GO:0009808: lignin metabolic process2.73E-03
79GO:0010120: camalexin biosynthetic process2.73E-03
80GO:0007338: single fertilization3.08E-03
81GO:0009051: pentose-phosphate shunt, oxidative branch3.08E-03
82GO:0006098: pentose-phosphate shunt3.08E-03
83GO:0008202: steroid metabolic process3.46E-03
84GO:0016573: histone acetylation3.46E-03
85GO:0035999: tetrahydrofolate interconversion3.46E-03
86GO:0006468: protein phosphorylation3.67E-03
87GO:0006032: chitin catabolic process3.84E-03
88GO:0009688: abscisic acid biosynthetic process3.84E-03
89GO:0043069: negative regulation of programmed cell death3.84E-03
90GO:0048829: root cap development3.84E-03
91GO:0000272: polysaccharide catabolic process4.24E-03
92GO:0010015: root morphogenesis4.24E-03
93GO:0009809: lignin biosynthetic process4.47E-03
94GO:0006813: potassium ion transport4.47E-03
95GO:0071365: cellular response to auxin stimulus4.65E-03
96GO:0000266: mitochondrial fission4.65E-03
97GO:0006108: malate metabolic process5.08E-03
98GO:0055046: microgametogenesis5.08E-03
99GO:0048367: shoot system development5.45E-03
100GO:0006541: glutamine metabolic process5.52E-03
101GO:0009933: meristem structural organization5.52E-03
102GO:0009626: plant-type hypersensitive response5.62E-03
103GO:0009620: response to fungus5.80E-03
104GO:0090351: seedling development5.97E-03
105GO:0046854: phosphatidylinositol phosphorylation5.97E-03
106GO:0007031: peroxisome organization5.97E-03
107GO:0005985: sucrose metabolic process5.97E-03
108GO:0080147: root hair cell development6.91E-03
109GO:0051260: protein homooligomerization7.91E-03
110GO:0030433: ubiquitin-dependent ERAD pathway8.42E-03
111GO:0031348: negative regulation of defense response8.42E-03
112GO:0071456: cellular response to hypoxia8.42E-03
113GO:0009814: defense response, incompatible interaction8.42E-03
114GO:0016226: iron-sulfur cluster assembly8.42E-03
115GO:0071369: cellular response to ethylene stimulus8.95E-03
116GO:0071215: cellular response to abscisic acid stimulus8.95E-03
117GO:0010584: pollen exine formation9.49E-03
118GO:0006817: phosphate ion transport9.49E-03
119GO:0009561: megagametogenesis9.49E-03
120GO:0042147: retrograde transport, endosome to Golgi1.00E-02
121GO:0000271: polysaccharide biosynthetic process1.06E-02
122GO:0010150: leaf senescence1.10E-02
123GO:0045489: pectin biosynthetic process1.12E-02
124GO:0006885: regulation of pH1.12E-02
125GO:0010154: fruit development1.12E-02
126GO:0009735: response to cytokinin1.16E-02
127GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.23E-02
128GO:0010183: pollen tube guidance1.24E-02
129GO:0048825: cotyledon development1.24E-02
130GO:0007166: cell surface receptor signaling pathway1.26E-02
131GO:0002229: defense response to oomycetes1.30E-02
132GO:0009630: gravitropism1.36E-02
133GO:1901657: glycosyl compound metabolic process1.42E-02
134GO:0009567: double fertilization forming a zygote and endosperm1.49E-02
135GO:0071805: potassium ion transmembrane transport1.55E-02
136GO:0051607: defense response to virus1.62E-02
137GO:0009615: response to virus1.68E-02
138GO:0009651: response to salt stress1.69E-02
139GO:0006950: response to stress1.89E-02
140GO:0009723: response to ethylene1.97E-02
141GO:0008219: cell death2.03E-02
142GO:0030244: cellulose biosynthetic process2.03E-02
143GO:0009832: plant-type cell wall biogenesis2.11E-02
144GO:0048767: root hair elongation2.11E-02
145GO:0006499: N-terminal protein myristoylation2.18E-02
146GO:0010043: response to zinc ion2.25E-02
147GO:0044550: secondary metabolite biosynthetic process2.30E-02
148GO:0016051: carbohydrate biosynthetic process2.41E-02
149GO:0006099: tricarboxylic acid cycle2.48E-02
150GO:0006839: mitochondrial transport2.64E-02
151GO:0006631: fatty acid metabolic process2.72E-02
152GO:0006869: lipid transport2.78E-02
153GO:0051707: response to other organism2.88E-02
154GO:0032259: methylation2.99E-02
155GO:0009965: leaf morphogenesis3.13E-02
156GO:0006855: drug transmembrane transport3.22E-02
157GO:0048364: root development3.26E-02
158GO:0006812: cation transport3.39E-02
159GO:0009846: pollen germination3.39E-02
160GO:0009736: cytokinin-activated signaling pathway3.56E-02
161GO:0009873: ethylene-activated signaling pathway4.02E-02
162GO:0050832: defense response to fungus4.16E-02
163GO:0009742: brassinosteroid mediated signaling pathway4.77E-02
RankGO TermAdjusted P value
1GO:0034387: 4-aminobutyrate:pyruvate transaminase activity0.00E+00
2GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity0.00E+00
3GO:0032442: phenylcoumaran benzylic ether reductase activity0.00E+00
4GO:0047634: agmatine N4-coumaroyltransferase activity0.00E+00
5GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
6GO:0004834: tryptophan synthase activity1.44E-05
7GO:0005496: steroid binding2.35E-05
8GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity1.31E-04
9GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity1.31E-04
10GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity1.31E-04
11GO:0033984: indole-3-glycerol-phosphate lyase activity1.31E-04
12GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity1.31E-04
13GO:0003867: 4-aminobutyrate transaminase activity1.31E-04
14GO:0071949: FAD binding1.34E-04
15GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity3.03E-04
16GO:0004477: methenyltetrahydrofolate cyclohydrolase activity3.03E-04
17GO:0032934: sterol binding3.03E-04
18GO:0004061: arylformamidase activity3.03E-04
19GO:0004329: formate-tetrahydrofolate ligase activity3.03E-04
20GO:0008061: chitin binding3.75E-04
21GO:0004383: guanylate cyclase activity4.99E-04
22GO:0016805: dipeptidase activity4.99E-04
23GO:0016595: glutamate binding4.99E-04
24GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity4.99E-04
25GO:0004049: anthranilate synthase activity4.99E-04
26GO:0005047: signal recognition particle binding4.99E-04
27GO:0003955: NAD(P)H dehydrogenase (quinone) activity4.99E-04
28GO:0016656: monodehydroascorbate reductase (NADH) activity7.14E-04
29GO:0043023: ribosomal large subunit binding7.14E-04
30GO:0000285: 1-phosphatidylinositol-3-phosphate 5-kinase activity7.14E-04
31GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity7.14E-04
32GO:0015086: cadmium ion transmembrane transporter activity7.14E-04
33GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor9.47E-04
34GO:0004737: pyruvate decarboxylase activity9.47E-04
35GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor9.47E-04
36GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity9.47E-04
37GO:0004470: malic enzyme activity9.47E-04
38GO:0004031: aldehyde oxidase activity9.47E-04
39GO:0050302: indole-3-acetaldehyde oxidase activity9.47E-04
40GO:0005524: ATP binding1.04E-03
41GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen1.20E-03
42GO:0005471: ATP:ADP antiporter activity1.20E-03
43GO:0008948: oxaloacetate decarboxylase activity1.20E-03
44GO:0020037: heme binding1.23E-03
45GO:0035252: UDP-xylosyltransferase activity1.47E-03
46GO:0036402: proteasome-activating ATPase activity1.47E-03
47GO:0030976: thiamine pyrophosphate binding1.47E-03
48GO:0004656: procollagen-proline 4-dioxygenase activity1.76E-03
49GO:0051020: GTPase binding1.76E-03
50GO:0051753: mannan synthase activity1.76E-03
51GO:0004012: phospholipid-translocating ATPase activity1.76E-03
52GO:0005506: iron ion binding2.00E-03
53GO:0004620: phospholipase activity2.06E-03
54GO:0016831: carboxy-lyase activity2.06E-03
55GO:0008235: metalloexopeptidase activity2.06E-03
56GO:0043022: ribosome binding2.39E-03
57GO:0004033: aldo-keto reductase (NADP) activity2.39E-03
58GO:0008142: oxysterol binding2.73E-03
59GO:0004568: chitinase activity3.84E-03
60GO:0008171: O-methyltransferase activity3.84E-03
61GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity3.84E-03
62GO:0004713: protein tyrosine kinase activity3.84E-03
63GO:0004177: aminopeptidase activity4.24E-03
64GO:0047372: acylglycerol lipase activity4.24E-03
65GO:0004022: alcohol dehydrogenase (NAD) activity5.08E-03
66GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism5.08E-03
67GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen5.27E-03
68GO:0045735: nutrient reservoir activity5.28E-03
69GO:0042973: glucan endo-1,3-beta-D-glucosidase activity5.52E-03
70GO:0017025: TBP-class protein binding5.97E-03
71GO:0016746: transferase activity, transferring acyl groups6.54E-03
72GO:0051536: iron-sulfur cluster binding6.91E-03
73GO:0031418: L-ascorbic acid binding6.91E-03
74GO:0008134: transcription factor binding6.91E-03
75GO:0043424: protein histidine kinase binding7.40E-03
76GO:0015079: potassium ion transmembrane transporter activity7.40E-03
77GO:0004540: ribonuclease activity7.91E-03
78GO:0016760: cellulose synthase (UDP-forming) activity8.95E-03
79GO:0016301: kinase activity9.20E-03
80GO:0005451: monovalent cation:proton antiporter activity1.06E-02
81GO:0016887: ATPase activity1.09E-02
82GO:0015299: solute:proton antiporter activity1.18E-02
83GO:0010181: FMN binding1.18E-02
84GO:0042626: ATPase activity, coupled to transmembrane movement of substances1.40E-02
85GO:0015385: sodium:proton antiporter activity1.42E-02
86GO:0004672: protein kinase activity1.48E-02
87GO:0016759: cellulose synthase activity1.49E-02
88GO:0000287: magnesium ion binding1.67E-02
89GO:0051213: dioxygenase activity1.68E-02
90GO:0008375: acetylglucosaminyltransferase activity1.82E-02
91GO:0102483: scopolin beta-glucosidase activity1.89E-02
92GO:0030247: polysaccharide binding1.89E-02
93GO:0008757: S-adenosylmethionine-dependent methyltransferase activity1.96E-02
94GO:0050660: flavin adenine dinucleotide binding1.97E-02
95GO:0019825: oxygen binding2.02E-02
96GO:0004497: monooxygenase activity2.12E-02
97GO:0030145: manganese ion binding2.25E-02
98GO:0016614: oxidoreductase activity, acting on CH-OH group of donors2.25E-02
99GO:0050897: cobalt ion binding2.25E-02
100GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors2.41E-02
101GO:0008422: beta-glucosidase activity2.56E-02
102GO:0051539: 4 iron, 4 sulfur cluster binding2.64E-02
103GO:0004364: glutathione transferase activity2.80E-02
104GO:0051537: 2 iron, 2 sulfur cluster binding3.05E-02
105GO:0003924: GTPase activity3.12E-02
106GO:0004674: protein serine/threonine kinase activity3.23E-02
107GO:0051287: NAD binding3.30E-02
108GO:0016298: lipase activity3.65E-02
109GO:0015171: amino acid transmembrane transporter activity3.83E-02
110GO:0016491: oxidoreductase activity4.41E-02
RankGO TermAdjusted P value
1GO:0005785: signal recognition particle receptor complex0.00E+00
2GO:0005774: vacuolar membrane2.89E-05
3GO:0045252: oxoglutarate dehydrogenase complex1.31E-04
4GO:0005950: anthranilate synthase complex3.03E-04
5GO:0005783: endoplasmic reticulum3.20E-04
6GO:0016020: membrane3.72E-04
7GO:0016021: integral component of membrane4.86E-04
8GO:0005829: cytosol1.25E-03
9GO:0005794: Golgi apparatus1.76E-03
10GO:0031597: cytosolic proteasome complex1.76E-03
11GO:0030173: integral component of Golgi membrane1.76E-03
12GO:0031595: nuclear proteasome complex2.06E-03
13GO:0030687: preribosome, large subunit precursor2.06E-03
14GO:0005786: signal recognition particle, endoplasmic reticulum targeting2.73E-03
15GO:0005779: integral component of peroxisomal membrane2.73E-03
16GO:0008540: proteasome regulatory particle, base subcomplex3.46E-03
17GO:0010008: endosome membrane5.45E-03
18GO:0005886: plasma membrane6.45E-03
19GO:0009570: chloroplast stroma7.15E-03
20GO:0005770: late endosome1.12E-02
21GO:0005773: vacuole1.32E-02
22GO:0005777: peroxisome1.54E-02
23GO:0005778: peroxisomal membrane1.55E-02
24GO:0005802: trans-Golgi network2.35E-02
25GO:0000502: proteasome complex3.56E-02
26GO:0009536: plastid4.04E-02
27GO:0012505: endomembrane system4.48E-02
Gene type



Gene DE type