GO Enrichment Analysis of Co-expressed Genes with
AT2G35260
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090279: regulation of calcium ion import | 0.00E+00 |
| 2 | GO:0015717: triose phosphate transport | 0.00E+00 |
| 3 | GO:0009661: chromoplast organization | 0.00E+00 |
| 4 | GO:0071474: cellular hyperosmotic response | 0.00E+00 |
| 5 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
| 6 | GO:0015970: guanosine tetraphosphate biosynthetic process | 0.00E+00 |
| 7 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 8 | GO:2000121: regulation of removal of superoxide radicals | 0.00E+00 |
| 9 | GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process | 0.00E+00 |
| 10 | GO:0015995: chlorophyll biosynthetic process | 5.09E-10 |
| 11 | GO:0015979: photosynthesis | 1.91E-06 |
| 12 | GO:0006824: cobalt ion transport | 8.25E-05 |
| 13 | GO:0071497: cellular response to freezing | 1.97E-04 |
| 14 | GO:0090342: regulation of cell aging | 1.97E-04 |
| 15 | GO:1904143: positive regulation of carotenoid biosynthetic process | 1.97E-04 |
| 16 | GO:0051262: protein tetramerization | 1.97E-04 |
| 17 | GO:0034755: iron ion transmembrane transport | 1.97E-04 |
| 18 | GO:0035436: triose phosphate transmembrane transport | 3.29E-04 |
| 19 | GO:0051639: actin filament network formation | 4.75E-04 |
| 20 | GO:0046902: regulation of mitochondrial membrane permeability | 4.75E-04 |
| 21 | GO:0042938: dipeptide transport | 6.32E-04 |
| 22 | GO:1901141: regulation of lignin biosynthetic process | 6.32E-04 |
| 23 | GO:0051764: actin crosslink formation | 6.32E-04 |
| 24 | GO:0009765: photosynthesis, light harvesting | 6.32E-04 |
| 25 | GO:0051205: protein insertion into membrane | 6.32E-04 |
| 26 | GO:0015713: phosphoglycerate transport | 6.32E-04 |
| 27 | GO:0045038: protein import into chloroplast thylakoid membrane | 8.00E-04 |
| 28 | GO:0034052: positive regulation of plant-type hypersensitive response | 8.00E-04 |
| 29 | GO:0016120: carotene biosynthetic process | 8.00E-04 |
| 30 | GO:0006656: phosphatidylcholine biosynthetic process | 8.00E-04 |
| 31 | GO:0006655: phosphatidylglycerol biosynthetic process | 9.77E-04 |
| 32 | GO:0009643: photosynthetic acclimation | 9.77E-04 |
| 33 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 9.77E-04 |
| 34 | GO:0009959: negative gravitropism | 9.77E-04 |
| 35 | GO:0032973: amino acid export | 9.77E-04 |
| 36 | GO:0009228: thiamine biosynthetic process | 9.77E-04 |
| 37 | GO:0009942: longitudinal axis specification | 1.16E-03 |
| 38 | GO:0010189: vitamin E biosynthetic process | 1.16E-03 |
| 39 | GO:0071470: cellular response to osmotic stress | 1.16E-03 |
| 40 | GO:0006865: amino acid transport | 1.34E-03 |
| 41 | GO:0009645: response to low light intensity stimulus | 1.36E-03 |
| 42 | GO:0010161: red light signaling pathway | 1.36E-03 |
| 43 | GO:0043090: amino acid import | 1.36E-03 |
| 44 | GO:0080186: developmental vegetative growth | 1.36E-03 |
| 45 | GO:0009769: photosynthesis, light harvesting in photosystem II | 1.36E-03 |
| 46 | GO:0034599: cellular response to oxidative stress | 1.46E-03 |
| 47 | GO:0043068: positive regulation of programmed cell death | 1.57E-03 |
| 48 | GO:0050821: protein stabilization | 1.57E-03 |
| 49 | GO:0009642: response to light intensity | 1.57E-03 |
| 50 | GO:0010100: negative regulation of photomorphogenesis | 1.79E-03 |
| 51 | GO:0007389: pattern specification process | 1.79E-03 |
| 52 | GO:0010114: response to red light | 1.79E-03 |
| 53 | GO:0010099: regulation of photomorphogenesis | 1.79E-03 |
| 54 | GO:0009657: plastid organization | 1.79E-03 |
| 55 | GO:0048574: long-day photoperiodism, flowering | 1.79E-03 |
| 56 | GO:0080144: amino acid homeostasis | 2.02E-03 |
| 57 | GO:0006783: heme biosynthetic process | 2.02E-03 |
| 58 | GO:0048507: meristem development | 2.02E-03 |
| 59 | GO:0042761: very long-chain fatty acid biosynthetic process | 2.26E-03 |
| 60 | GO:0043085: positive regulation of catalytic activity | 2.77E-03 |
| 61 | GO:0030148: sphingolipid biosynthetic process | 2.77E-03 |
| 62 | GO:0009698: phenylpropanoid metabolic process | 2.77E-03 |
| 63 | GO:0015706: nitrate transport | 3.03E-03 |
| 64 | GO:0016024: CDP-diacylglycerol biosynthetic process | 3.03E-03 |
| 65 | GO:0006636: unsaturated fatty acid biosynthetic process | 4.18E-03 |
| 66 | GO:0034976: response to endoplasmic reticulum stress | 4.18E-03 |
| 67 | GO:0051017: actin filament bundle assembly | 4.48E-03 |
| 68 | GO:0006289: nucleotide-excision repair | 4.48E-03 |
| 69 | GO:0010187: negative regulation of seed germination | 4.48E-03 |
| 70 | GO:0009768: photosynthesis, light harvesting in photosystem I | 4.80E-03 |
| 71 | GO:0007017: microtubule-based process | 4.80E-03 |
| 72 | GO:0016114: terpenoid biosynthetic process | 5.12E-03 |
| 73 | GO:0009269: response to desiccation | 5.12E-03 |
| 74 | GO:0009814: defense response, incompatible interaction | 5.45E-03 |
| 75 | GO:0009686: gibberellin biosynthetic process | 5.78E-03 |
| 76 | GO:0070417: cellular response to cold | 6.48E-03 |
| 77 | GO:0048653: anther development | 6.83E-03 |
| 78 | GO:0006662: glycerol ether metabolic process | 7.20E-03 |
| 79 | GO:0010305: leaf vascular tissue pattern formation | 7.20E-03 |
| 80 | GO:0007018: microtubule-based movement | 7.57E-03 |
| 81 | GO:0008654: phospholipid biosynthetic process | 7.95E-03 |
| 82 | GO:0010193: response to ozone | 8.33E-03 |
| 83 | GO:0010583: response to cyclopentenone | 8.73E-03 |
| 84 | GO:0010252: auxin homeostasis | 9.53E-03 |
| 85 | GO:0010027: thylakoid membrane organization | 1.08E-02 |
| 86 | GO:0010029: regulation of seed germination | 1.12E-02 |
| 87 | GO:0018298: protein-chromophore linkage | 1.30E-02 |
| 88 | GO:0045454: cell redox homeostasis | 1.35E-02 |
| 89 | GO:0010218: response to far red light | 1.39E-02 |
| 90 | GO:0007568: aging | 1.44E-02 |
| 91 | GO:0009910: negative regulation of flower development | 1.44E-02 |
| 92 | GO:0009631: cold acclimation | 1.44E-02 |
| 93 | GO:0009637: response to blue light | 1.54E-02 |
| 94 | GO:0032259: methylation | 1.59E-02 |
| 95 | GO:0006629: lipid metabolic process | 1.66E-02 |
| 96 | GO:0006839: mitochondrial transport | 1.69E-02 |
| 97 | GO:0006508: proteolysis | 1.72E-02 |
| 98 | GO:0048364: root development | 1.73E-02 |
| 99 | GO:0009926: auxin polar transport | 1.84E-02 |
| 100 | GO:0009640: photomorphogenesis | 1.84E-02 |
| 101 | GO:0009644: response to high light intensity | 1.95E-02 |
| 102 | GO:0055114: oxidation-reduction process | 1.98E-02 |
| 103 | GO:0006364: rRNA processing | 2.28E-02 |
| 104 | GO:0010224: response to UV-B | 2.33E-02 |
| 105 | GO:0009734: auxin-activated signaling pathway | 2.34E-02 |
| 106 | GO:0006857: oligopeptide transport | 2.39E-02 |
| 107 | GO:0006417: regulation of translation | 2.45E-02 |
| 108 | GO:0009626: plant-type hypersensitive response | 2.68E-02 |
| 109 | GO:0009740: gibberellic acid mediated signaling pathway | 2.80E-02 |
| 110 | GO:0006396: RNA processing | 2.99E-02 |
| 111 | GO:0055085: transmembrane transport | 3.74E-02 |
| 112 | GO:0009790: embryo development | 3.83E-02 |
| 113 | GO:0040008: regulation of growth | 4.18E-02 |
| 114 | GO:0007623: circadian rhythm | 4.32E-02 |
| 115 | GO:0010150: leaf senescence | 4.32E-02 |
| 116 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 4.67E-02 |
| 117 | GO:0007166: cell surface receptor signaling pathway | 4.75E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 2 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
| 3 | GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity | 0.00E+00 |
| 4 | GO:0034639: L-amino acid efflux transmembrane transporter activity | 0.00E+00 |
| 5 | GO:0004462: lactoylglutathione lyase activity | 1.65E-05 |
| 6 | GO:0052631: sphingolipid delta-8 desaturase activity | 8.25E-05 |
| 7 | GO:0005227: calcium activated cation channel activity | 8.25E-05 |
| 8 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 8.25E-05 |
| 9 | GO:0010313: phytochrome binding | 8.25E-05 |
| 10 | GO:0019172: glyoxalase III activity | 1.97E-04 |
| 11 | GO:0008728: GTP diphosphokinase activity | 1.97E-04 |
| 12 | GO:0000234: phosphoethanolamine N-methyltransferase activity | 1.97E-04 |
| 13 | GO:0016868: intramolecular transferase activity, phosphotransferases | 1.97E-04 |
| 14 | GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity | 1.97E-04 |
| 15 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 1.97E-04 |
| 16 | GO:0016805: dipeptidase activity | 3.29E-04 |
| 17 | GO:0071917: triose-phosphate transmembrane transporter activity | 3.29E-04 |
| 18 | GO:0004180: carboxypeptidase activity | 3.29E-04 |
| 19 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 3.29E-04 |
| 20 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 4.75E-04 |
| 21 | GO:0016851: magnesium chelatase activity | 4.75E-04 |
| 22 | GO:0019901: protein kinase binding | 5.70E-04 |
| 23 | GO:0070628: proteasome binding | 6.32E-04 |
| 24 | GO:0015120: phosphoglycerate transmembrane transporter activity | 6.32E-04 |
| 25 | GO:0042936: dipeptide transporter activity | 6.32E-04 |
| 26 | GO:0005471: ATP:ADP antiporter activity | 8.00E-04 |
| 27 | GO:0031593: polyubiquitin binding | 9.77E-04 |
| 28 | GO:0004605: phosphatidate cytidylyltransferase activity | 9.77E-04 |
| 29 | GO:0004602: glutathione peroxidase activity | 1.16E-03 |
| 30 | GO:0005347: ATP transmembrane transporter activity | 1.16E-03 |
| 31 | GO:0005261: cation channel activity | 1.16E-03 |
| 32 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 1.79E-03 |
| 33 | GO:0009672: auxin:proton symporter activity | 2.26E-03 |
| 34 | GO:0005381: iron ion transmembrane transporter activity | 2.26E-03 |
| 35 | GO:0005515: protein binding | 2.43E-03 |
| 36 | GO:0008047: enzyme activator activity | 2.51E-03 |
| 37 | GO:0015171: amino acid transmembrane transporter activity | 2.66E-03 |
| 38 | GO:0010329: auxin efflux transmembrane transporter activity | 3.31E-03 |
| 39 | GO:0005215: transporter activity | 3.68E-03 |
| 40 | GO:0004190: aspartic-type endopeptidase activity | 3.88E-03 |
| 41 | GO:0031409: pigment binding | 4.18E-03 |
| 42 | GO:0008289: lipid binding | 4.26E-03 |
| 43 | GO:0043130: ubiquitin binding | 4.48E-03 |
| 44 | GO:0003756: protein disulfide isomerase activity | 6.13E-03 |
| 45 | GO:0003727: single-stranded RNA binding | 6.13E-03 |
| 46 | GO:0047134: protein-disulfide reductase activity | 6.48E-03 |
| 47 | GO:0004791: thioredoxin-disulfide reductase activity | 7.57E-03 |
| 48 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 9.12E-03 |
| 49 | GO:0051015: actin filament binding | 9.12E-03 |
| 50 | GO:0003684: damaged DNA binding | 9.53E-03 |
| 51 | GO:0005200: structural constituent of cytoskeleton | 9.94E-03 |
| 52 | GO:0016168: chlorophyll binding | 1.12E-02 |
| 53 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 1.26E-02 |
| 54 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.30E-02 |
| 55 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 1.64E-02 |
| 56 | GO:0042393: histone binding | 1.69E-02 |
| 57 | GO:0004185: serine-type carboxypeptidase activity | 1.84E-02 |
| 58 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.95E-02 |
| 59 | GO:0043621: protein self-association | 1.95E-02 |
| 60 | GO:0016298: lipase activity | 2.33E-02 |
| 61 | GO:0003777: microtubule motor activity | 2.45E-02 |
| 62 | GO:0003779: actin binding | 2.86E-02 |
| 63 | GO:0046872: metal ion binding | 2.93E-02 |
| 64 | GO:0015035: protein disulfide oxidoreductase activity | 2.99E-02 |
| 65 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 3.50E-02 |
| 66 | GO:0016829: lyase activity | 3.63E-02 |
| 67 | GO:0004252: serine-type endopeptidase activity | 3.70E-02 |
| 68 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 4.11E-02 |
| 69 | GO:0015297: antiporter activity | 4.18E-02 |
| 70 | GO:0008017: microtubule binding | 4.46E-02 |
| 71 | GO:0005525: GTP binding | 4.83E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 2 | GO:0009534: chloroplast thylakoid | 1.04E-08 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 2.25E-08 |
| 4 | GO:0009507: chloroplast | 3.34E-07 |
| 5 | GO:0009570: chloroplast stroma | 2.72E-05 |
| 6 | GO:0009941: chloroplast envelope | 4.58E-05 |
| 7 | GO:0031969: chloroplast membrane | 2.46E-04 |
| 8 | GO:0010007: magnesium chelatase complex | 3.29E-04 |
| 9 | GO:0009706: chloroplast inner membrane | 3.84E-04 |
| 10 | GO:0016021: integral component of membrane | 4.24E-04 |
| 11 | GO:0032432: actin filament bundle | 4.75E-04 |
| 12 | GO:0010287: plastoglobule | 4.78E-04 |
| 13 | GO:0009517: PSII associated light-harvesting complex II | 6.32E-04 |
| 14 | GO:0030660: Golgi-associated vesicle membrane | 6.32E-04 |
| 15 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 6.32E-04 |
| 16 | GO:0009579: thylakoid | 1.42E-03 |
| 17 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 1.57E-03 |
| 18 | GO:0009538: photosystem I reaction center | 1.57E-03 |
| 19 | GO:0045298: tubulin complex | 2.02E-03 |
| 20 | GO:0005765: lysosomal membrane | 2.77E-03 |
| 21 | GO:0005884: actin filament | 2.77E-03 |
| 22 | GO:0016602: CCAAT-binding factor complex | 3.31E-03 |
| 23 | GO:0030095: chloroplast photosystem II | 3.59E-03 |
| 24 | GO:0030076: light-harvesting complex | 3.88E-03 |
| 25 | GO:0009543: chloroplast thylakoid lumen | 4.25E-03 |
| 26 | GO:0042651: thylakoid membrane | 4.80E-03 |
| 27 | GO:0005789: endoplasmic reticulum membrane | 6.00E-03 |
| 28 | GO:0005871: kinesin complex | 6.48E-03 |
| 29 | GO:0005783: endoplasmic reticulum | 6.49E-03 |
| 30 | GO:0009522: photosystem I | 7.57E-03 |
| 31 | GO:0009523: photosystem II | 7.95E-03 |
| 32 | GO:0005874: microtubule | 1.09E-02 |
| 33 | GO:0016020: membrane | 1.41E-02 |
| 34 | GO:0031977: thylakoid lumen | 1.74E-02 |
| 35 | GO:0010008: endosome membrane | 2.62E-02 |
| 36 | GO:0005623: cell | 3.50E-02 |