co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G34430

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010378: temperature compensation of the circadian clock	0.00E+00
2	GO:0030644: cellular chloride ion homeostasis	0.00E+00
3	GO:1903508: positive regulation of nucleic acid-templated transcription	0.00E+00
4	GO:1903428: positive regulation of reactive oxygen species biosynthetic process	0.00E+00
5	GO:0009768: photosynthesis, light harvesting in photosystem I	3.31E-20
6	GO:0018298: protein-chromophore linkage	1.32E-12
7	GO:0015979: photosynthesis	1.95E-09
8	GO:0009645: response to low light intensity stimulus	3.15E-09
9	GO:0010218: response to far red light	7.58E-09
10	GO:0009644: response to high light intensity	3.54E-08
11	GO:0009409: response to cold	4.89E-08
12	GO:0009637: response to blue light	5.12E-07
13	GO:0010114: response to red light	1.02E-06
14	GO:0009416: response to light stimulus	1.26E-05
15	GO:0042542: response to hydrogen peroxide	2.44E-05
16	GO:0009769: photosynthesis, light harvesting in photosystem II	6.70E-05
17	GO:0010196: nonphotochemical quenching	6.70E-05
18	GO:0080167: response to karrikin	9.36E-05
19	GO:0015812: gamma-aminobutyric acid transport	1.31E-04
20	GO:0032958: inositol phosphate biosynthetic process	1.31E-04
21	GO:0009970: cellular response to sulfate starvation	1.92E-04
22	GO:0007623: circadian rhythm	2.38E-04
23	GO:0051170: nuclear import	3.03E-04
24	GO:1902884: positive regulation of response to oxidative stress	3.03E-04
25	GO:0006883: cellular sodium ion homeostasis	3.03E-04
26	GO:0006598: polyamine catabolic process	4.99E-04
27	GO:1901562: response to paraquat	4.99E-04
28	GO:0042256: mature ribosome assembly	4.99E-04
29	GO:1902448: positive regulation of shade avoidance	4.99E-04
30	GO:0009585: red, far-red light phototransduction	5.46E-04
31	GO:0048511: rhythmic process	5.61E-04
32	GO:0010017: red or far-red light signaling pathway	6.13E-04
33	GO:0031936: negative regulation of chromatin silencing	7.14E-04
34	GO:0006020: inositol metabolic process	7.14E-04
35	GO:0010601: positive regulation of auxin biosynthetic process	7.14E-04
36	GO:1901002: positive regulation of response to salt stress	9.47E-04
37	GO:0030104: water homeostasis	9.47E-04
38	GO:0009687: abscisic acid metabolic process	9.47E-04
39	GO:0015743: malate transport	9.47E-04
40	GO:0009765: photosynthesis, light harvesting	9.47E-04
41	GO:2000306: positive regulation of photomorphogenesis	9.47E-04
42	GO:0010600: regulation of auxin biosynthetic process	9.47E-04
43	GO:0048578: positive regulation of long-day photoperiodism, flowering	1.20E-03
44	GO:0009635: response to herbicide	1.47E-03
45	GO:0045962: positive regulation of development, heterochronic	1.47E-03
46	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.67E-03
47	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	1.76E-03
48	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	1.76E-03
49	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	1.76E-03
50	GO:0080111: DNA demethylation	2.06E-03
51	GO:0010161: red light signaling pathway	2.06E-03
52	GO:0048437: floral organ development	2.06E-03
53	GO:0000160: phosphorelay signal transduction system	2.15E-03
54	GO:0010078: maintenance of root meristem identity	2.39E-03
55	GO:0009704: de-etiolation	2.39E-03
56	GO:0010928: regulation of auxin mediated signaling pathway	2.39E-03
57	GO:0009735: response to cytokinin	2.47E-03
58	GO:0010099: regulation of photomorphogenesis	2.73E-03
59	GO:0035556: intracellular signal transduction	3.07E-03
60	GO:0090333: regulation of stomatal closure	3.08E-03
61	GO:0009640: photomorphogenesis	3.32E-03
62	GO:0030042: actin filament depolymerization	3.46E-03
63	GO:0010018: far-red light signaling pathway	3.46E-03
64	GO:0008643: carbohydrate transport	3.59E-03
65	GO:0006995: cellular response to nitrogen starvation	3.84E-03
66	GO:0055062: phosphate ion homeostasis	3.84E-03
67	GO:0006535: cysteine biosynthetic process from serine	3.84E-03
68	GO:0009688: abscisic acid biosynthetic process	3.84E-03
69	GO:0009641: shade avoidance	3.84E-03
70	GO:0010162: seed dormancy process	3.84E-03
71	GO:0010200: response to chitin	3.97E-03
72	GO:0055085: transmembrane transport	4.07E-03
73	GO:0042538: hyperosmotic salinity response	4.17E-03
74	GO:0018119: peptidyl-cysteine S-nitrosylation	4.24E-03
75	GO:0016925: protein sumoylation	4.65E-03
76	GO:0006355: regulation of transcription, DNA-templated	4.73E-03
77	GO:0050826: response to freezing	5.08E-03
78	GO:0009718: anthocyanin-containing compound biosynthetic process	5.08E-03
79	GO:0009767: photosynthetic electron transport chain	5.08E-03
80	GO:2000012: regulation of auxin polar transport	5.08E-03
81	GO:0010207: photosystem II assembly	5.52E-03
82	GO:0007015: actin filament organization	5.52E-03
83	GO:0009266: response to temperature stimulus	5.52E-03
84	GO:0019853: L-ascorbic acid biosynthetic process	5.97E-03
85	GO:0090351: seedling development	5.97E-03
86	GO:0042753: positive regulation of circadian rhythm	6.43E-03
87	GO:0019344: cysteine biosynthetic process	6.91E-03
88	GO:0007165: signal transduction	7.43E-03
89	GO:0009737: response to abscisic acid	7.73E-03
90	GO:0003333: amino acid transmembrane transport	7.91E-03
91	GO:0010431: seed maturation	7.91E-03
92	GO:0009269: response to desiccation	7.91E-03
93	GO:0009414: response to water deprivation	7.97E-03
94	GO:0006012: galactose metabolic process	8.95E-03
95	GO:0071215: cellular response to abscisic acid stimulus	8.95E-03
96	GO:0045492: xylan biosynthetic process	9.49E-03
97	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.00E-02
98	GO:0006351: transcription, DNA-templated	1.05E-02
99	GO:0006814: sodium ion transport	1.18E-02
100	GO:0042752: regulation of circadian rhythm	1.18E-02
101	GO:0009739: response to gibberellin	1.23E-02
102	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.23E-02
103	GO:0009738: abscisic acid-activated signaling pathway	1.24E-02
104	GO:0009556: microsporogenesis	1.24E-02
105	GO:0000302: response to reactive oxygen species	1.30E-02
106	GO:0010468: regulation of gene expression	1.31E-02
107	GO:1901657: glycosyl compound metabolic process	1.42E-02
108	GO:0009639: response to red or far red light	1.49E-02
109	GO:0045893: positive regulation of transcription, DNA-templated	1.54E-02
110	GO:0010286: heat acclimation	1.55E-02
111	GO:0009651: response to salt stress	1.69E-02
112	GO:0010029: regulation of seed germination	1.75E-02
113	GO:0006970: response to osmotic stress	1.84E-02
114	GO:0015995: chlorophyll biosynthetic process	1.89E-02
115	GO:0048573: photoperiodism, flowering	1.89E-02
116	GO:0006950: response to stress	1.89E-02
117	GO:0048481: plant ovule development	2.03E-02
118	GO:0009817: defense response to fungus, incompatible interaction	2.03E-02
119	GO:0009631: cold acclimation	2.25E-02
120	GO:0010119: regulation of stomatal movement	2.25E-02
121	GO:0045892: negative regulation of transcription, DNA-templated	2.57E-02
122	GO:0006839: mitochondrial transport	2.64E-02
123	GO:0051707: response to other organism	2.88E-02
124	GO:0006629: lipid metabolic process	3.12E-02
125	GO:0009408: response to heat	3.12E-02
126	GO:0009965: leaf morphogenesis	3.13E-02
127	GO:0000165: MAPK cascade	3.30E-02
128	GO:0006812: cation transport	3.39E-02
129	GO:0009909: regulation of flower development	3.83E-02
130	GO:0055114: oxidation-reduction process	3.89E-02
131	GO:0016567: protein ubiquitination	4.31E-02
132	GO:0009553: embryo sac development	4.48E-02
133	GO:0009624: response to nematode	4.58E-02
134	GO:0009908: flower development	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0004567: beta-mannosidase activity	0.00E+00
2	GO:0080082: esculin beta-glucosidase activity	0.00E+00
3	GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity	0.00E+00
4	GO:0047668: amygdalin beta-glucosidase activity	0.00E+00
5	GO:0019912: cyclin-dependent protein kinase activating kinase activity	0.00E+00
6	GO:0080083: beta-gentiobiose beta-glucosidase activity	0.00E+00
7	GO:0030504: inorganic diphosphate transmembrane transporter activity	0.00E+00
8	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
9	GO:0031409: pigment binding	2.53E-18
10	GO:0016168: chlorophyll binding	5.63E-15
11	GO:0005515: protein binding	1.82E-06
12	GO:0015185: gamma-aminobutyric acid transmembrane transporter activity	1.31E-04
13	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	1.31E-04
14	GO:0000829: inositol heptakisphosphate kinase activity	1.31E-04
15	GO:0080079: cellobiose glucosidase activity	1.31E-04
16	GO:0000828: inositol hexakisphosphate kinase activity	1.31E-04
17	GO:0015180: L-alanine transmembrane transporter activity	3.03E-04
18	GO:0046872: metal ion binding	4.92E-04
19	GO:0004096: catalase activity	4.99E-04
20	GO:0046592: polyamine oxidase activity	4.99E-04
21	GO:0019948: SUMO activating enzyme activity	4.99E-04
22	GO:0017150: tRNA dihydrouridine synthase activity	4.99E-04
23	GO:0004707: MAP kinase activity	5.61E-04
24	GO:0015181: arginine transmembrane transporter activity	7.14E-04
25	GO:0009001: serine O-acetyltransferase activity	7.14E-04
26	GO:0015189: L-lysine transmembrane transporter activity	7.14E-04
27	GO:0005253: anion channel activity	9.47E-04
28	GO:0005313: L-glutamate transmembrane transporter activity	9.47E-04
29	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	1.20E-03
30	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	1.20E-03
31	GO:0000156: phosphorelay response regulator activity	1.25E-03
32	GO:0004629: phospholipase C activity	1.47E-03
33	GO:0015562: efflux transmembrane transporter activity	1.47E-03
34	GO:0004435: phosphatidylinositol phospholipase C activity	1.76E-03
35	GO:0015140: malate transmembrane transporter activity	2.06E-03
36	GO:0004033: aldo-keto reductase (NADP) activity	2.39E-03
37	GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity	2.73E-03
38	GO:0000989: transcription factor activity, transcription factor binding	3.08E-03
39	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	3.08E-03
40	GO:0047372: acylglycerol lipase activity	4.24E-03
41	GO:0005315: inorganic phosphate transmembrane transporter activity	5.08E-03
42	GO:0008131: primary amine oxidase activity	5.52E-03
43	GO:0003712: transcription cofactor activity	5.97E-03
44	GO:0008324: cation transmembrane transporter activity	7.40E-03
45	GO:0016787: hydrolase activity	7.80E-03
46	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	8.17E-03
47	GO:0008514: organic anion transmembrane transporter activity	9.49E-03
48	GO:0003700: transcription factor activity, sequence-specific DNA binding	9.69E-03
49	GO:0015297: antiporter activity	1.05E-02
50	GO:0005351: sugar:proton symporter activity	1.07E-02
51	GO:0008270: zinc ion binding	1.11E-02
52	GO:0102483: scopolin beta-glucosidase activity	1.89E-02
53	GO:0004497: monooxygenase activity	2.12E-02
54	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	2.18E-02
55	GO:0061630: ubiquitin protein ligase activity	2.23E-02
56	GO:0050897: cobalt ion binding	2.25E-02
57	GO:0003993: acid phosphatase activity	2.48E-02
58	GO:0008422: beta-glucosidase activity	2.56E-02
59	GO:0042393: histone binding	2.64E-02
60	GO:0003677: DNA binding	3.08E-02
61	GO:0005198: structural molecule activity	3.13E-02
62	GO:0015293: symporter activity	3.13E-02
63	GO:0003824: catalytic activity	3.53E-02
64	GO:0005215: transporter activity	3.56E-02
65	GO:0015171: amino acid transmembrane transporter activity	3.83E-02
66	GO:0045735: nutrient reservoir activity	4.01E-02
67	GO:0016874: ligase activity	4.39E-02
68	GO:0022857: transmembrane transporter activity	4.39E-02
69	GO:0003779: actin binding	4.48E-02

Rank	GO Term	Adjusted P value
1	GO:0009783: photosystem II antenna complex	0.00E+00
2	GO:0009522: photosystem I	3.05E-16
3	GO:0030076: light-harvesting complex	7.35E-14
4	GO:0010287: plastoglobule	2.07E-13
5	GO:0009579: thylakoid	3.54E-11
6	GO:0009534: chloroplast thylakoid	6.96E-10
7	GO:0009535: chloroplast thylakoid membrane	5.92E-09
8	GO:0009941: chloroplast envelope	5.22E-08
9	GO:0009523: photosystem II	2.05E-06
10	GO:0016021: integral component of membrane	7.79E-06
11	GO:0009517: PSII associated light-harvesting complex II	1.44E-05
12	GO:0009507: chloroplast	4.16E-04
13	GO:0042651: thylakoid membrane	5.12E-04
14	GO:0009898: cytoplasmic side of plasma membrane	9.47E-04
15	GO:0032586: protein storage vacuole membrane	9.47E-04
16	GO:0016020: membrane	1.92E-03
17	GO:0009533: chloroplast stromal thylakoid	2.06E-03
18	GO:0000326: protein storage vacuole	2.73E-03
19	GO:0010494: cytoplasmic stress granule	3.08E-03
20	GO:0005777: peroxisome	3.49E-03
21	GO:0030095: chloroplast photosystem II	5.52E-03
22	GO:0009654: photosystem II oxygen evolving complex	7.40E-03
23	GO:0015629: actin cytoskeleton	8.95E-03
24	GO:0019898: extrinsic component of membrane	1.24E-02
25	GO:0000932: P-body	1.68E-02
26	GO:0000786: nucleosome	2.33E-02
27	GO:0005622: intracellular	2.67E-02
28	GO:0031977: thylakoid lumen	2.72E-02
29	GO:0031966: mitochondrial membrane	3.39E-02
30	GO:0016607: nuclear speck	4.11E-02