Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G34040

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0034213: quinolinate catabolic process0.00E+00
2GO:1904281: positive regulation of transcription from RNA polymerase V promoter0.00E+00
3GO:0000492: box C/D snoRNP assembly0.00E+00
4GO:1990280: RNA localization to chromatin0.00E+00
5GO:0006127: glycerophosphate shuttle0.00E+00
6GO:0000491: small nucleolar ribonucleoprotein complex assembly0.00E+00
7GO:2000034: regulation of seed maturation7.38E-08
8GO:0034724: DNA replication-independent nucleosome organization1.48E-05
9GO:0080178: 5-carbamoylmethyl uridine residue modification1.48E-05
10GO:1902466: positive regulation of histone H3-K27 trimethylation1.48E-05
11GO:1903705: positive regulation of production of siRNA involved in RNA interference1.48E-05
12GO:0010030: positive regulation of seed germination1.61E-05
13GO:0015012: heparan sulfate proteoglycan biosynthetic process3.88E-05
14GO:0031538: negative regulation of anthocyanin metabolic process3.88E-05
15GO:0031204: posttranslational protein targeting to membrane, translocation3.88E-05
16GO:0006024: glycosaminoglycan biosynthetic process3.88E-05
17GO:0019563: glycerol catabolic process6.95E-05
18GO:0032784: regulation of DNA-templated transcription, elongation6.95E-05
19GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition6.95E-05
20GO:0070940: dephosphorylation of RNA polymerase II C-terminal domain1.05E-04
21GO:0048530: fruit morphogenesis1.05E-04
22GO:0006346: methylation-dependent chromatin silencing1.45E-04
23GO:0032968: positive regulation of transcription elongation from RNA polymerase II promoter1.45E-04
24GO:0002098: tRNA wobble uridine modification1.45E-04
25GO:0009435: NAD biosynthetic process1.88E-04
26GO:0006400: tRNA modification3.32E-04
27GO:0006368: transcription elongation from RNA polymerase II promoter3.32E-04
28GO:0006614: SRP-dependent cotranslational protein targeting to membrane3.32E-04
29GO:0010928: regulation of auxin mediated signaling pathway3.84E-04
30GO:0035265: organ growth3.84E-04
31GO:0009787: regulation of abscisic acid-activated signaling pathway3.84E-04
32GO:0018105: peptidyl-serine phosphorylation4.24E-04
33GO:0044030: regulation of DNA methylation4.37E-04
34GO:2000024: regulation of leaf development4.93E-04
35GO:0048589: developmental growth4.93E-04
36GO:0006457: protein folding5.05E-04
37GO:0018107: peptidyl-threonine phosphorylation7.91E-04
38GO:0080188: RNA-directed DNA methylation9.19E-04
39GO:0006071: glycerol metabolic process9.85E-04
40GO:0034976: response to endoplasmic reticulum stress9.85E-04
41GO:0071215: cellular response to abscisic acid stimulus1.34E-03
42GO:0046777: protein autophosphorylation1.38E-03
43GO:0008284: positive regulation of cell proliferation1.49E-03
44GO:0000413: protein peptidyl-prolyl isomerization1.57E-03
45GO:0009615: response to virus2.42E-03
46GO:0009734: auxin-activated signaling pathway2.64E-03
47GO:0006499: N-terminal protein myristoylation3.09E-03
48GO:0009738: abscisic acid-activated signaling pathway3.20E-03
49GO:0035556: intracellular signal transduction3.49E-03
50GO:0008283: cell proliferation4.04E-03
51GO:0009744: response to sucrose4.04E-03
52GO:0009965: leaf morphogenesis4.37E-03
53GO:0006260: DNA replication4.60E-03
54GO:0006486: protein glycosylation4.95E-03
55GO:0006396: RNA processing6.44E-03
56GO:0006413: translational initiation8.79E-03
57GO:0010228: vegetative to reproductive phase transition of meristem9.53E-03
58GO:0006970: response to osmotic stress1.32E-02
59GO:0009737: response to abscisic acid1.42E-02
60GO:0006351: transcription, DNA-templated1.48E-02
61GO:0016192: vesicle-mediated transport1.51E-02
62GO:0045454: cell redox homeostasis1.66E-02
63GO:0045892: negative regulation of transcription, DNA-templated1.68E-02
64GO:0006886: intracellular protein transport1.70E-02
65GO:0006281: DNA repair1.93E-02
66GO:0045893: positive regulation of transcription, DNA-templated3.20E-02
67GO:0006979: response to oxidative stress4.82E-02
RankGO TermAdjusted P value
1GO:0052591: sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity0.00E+00
2GO:0004368: glycerol-3-phosphate dehydrogenase activity0.00E+00
3GO:0008312: 7S RNA binding2.71E-06
4GO:0004750: ribulose-phosphate 3-epimerase activity3.88E-05
5GO:0004514: nicotinate-nucleotide diphosphorylase (carboxylating) activity3.88E-05
6GO:0004647: phosphoserine phosphatase activity6.95E-05
7GO:0016004: phospholipase activator activity1.45E-04
8GO:0015301: anion:anion antiporter activity1.88E-04
9GO:0005452: inorganic anion exchanger activity1.88E-04
10GO:0008420: CTD phosphatase activity2.34E-04
11GO:0031491: nucleosome binding2.82E-04
12GO:0030515: snoRNA binding3.32E-04
13GO:0005525: GTP binding6.79E-04
14GO:0003725: double-stranded RNA binding7.91E-04
15GO:0000175: 3'-5'-exoribonuclease activity7.91E-04
16GO:0008408: 3'-5' exonuclease activity1.19E-03
17GO:0003756: protein disulfide isomerase activity1.41E-03
18GO:0003727: single-stranded RNA binding1.41E-03
19GO:0003924: GTPase activity1.89E-03
20GO:0016791: phosphatase activity2.15E-03
21GO:0009931: calcium-dependent protein serine/threonine kinase activity2.61E-03
22GO:0004683: calmodulin-dependent protein kinase activity2.70E-03
23GO:0042393: histone binding3.71E-03
24GO:0003755: peptidyl-prolyl cis-trans isomerase activity4.49E-03
25GO:0016746: transferase activity, transferring acyl groups6.44E-03
26GO:0008026: ATP-dependent helicase activity6.57E-03
27GO:0008565: protein transporter activity8.35E-03
28GO:0003743: translation initiation factor activity1.03E-02
29GO:0003676: nucleic acid binding2.76E-02
30GO:0000166: nucleotide binding2.90E-02
31GO:0016740: transferase activity3.34E-02
32GO:0005516: calmodulin binding3.88E-02
33GO:0005509: calcium ion binding4.53E-02
RankGO TermAdjusted P value
1GO:0035101: FACT complex3.88E-05
2GO:0005622: intracellular7.38E-05
3GO:0009331: glycerol-3-phosphate dehydrogenase complex1.05E-04
4GO:0005719: nuclear euchromatin1.05E-04
5GO:0033588: Elongator holoenzyme complex1.05E-04
6GO:0016591: DNA-directed RNA polymerase II, holoenzyme1.88E-04
7GO:0030131: clathrin adaptor complex3.84E-04
8GO:0005786: signal recognition particle, endoplasmic reticulum targeting4.37E-04
9GO:0030659: cytoplasmic vesicle membrane8.55E-04
10GO:0030176: integral component of endoplasmic reticulum membrane9.19E-04
11GO:0005654: nucleoplasm7.24E-03
12GO:0005794: Golgi apparatus8.47E-03
13GO:0005783: endoplasmic reticulum1.01E-02
14GO:0005730: nucleolus1.13E-02
15GO:0005743: mitochondrial inner membrane1.83E-02
16GO:0005737: cytoplasm2.75E-02
17GO:0005802: trans-Golgi network4.06E-02
18GO:0005768: endosome4.45E-02
Gene type



Gene DE type