co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G33450

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0002184: cytoplasmic translational termination	0.00E+00
2	GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate	0.00E+00
3	GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation	0.00E+00
4	GO:0015742: alpha-ketoglutarate transport	0.00E+00
5	GO:0006428: isoleucyl-tRNA aminoacylation	0.00E+00
6	GO:0006223: uracil salvage	0.00E+00
7	GO:0042407: cristae formation	0.00E+00
8	GO:0016553: base conversion or substitution editing	0.00E+00
9	GO:0042371: vitamin K biosynthetic process	0.00E+00
10	GO:0006399: tRNA metabolic process	0.00E+00
11	GO:0006437: tyrosyl-tRNA aminoacylation	0.00E+00
12	GO:0070125: mitochondrial translational elongation	0.00E+00
13	GO:0006412: translation	6.76E-18
14	GO:0032544: plastid translation	8.33E-15
15	GO:0042254: ribosome biogenesis	1.26E-09
16	GO:0009658: chloroplast organization	2.17E-08
17	GO:0009735: response to cytokinin	2.30E-06
18	GO:0006457: protein folding	9.10E-06
19	GO:0006633: fatty acid biosynthetic process	1.23E-05
20	GO:0051085: chaperone mediated protein folding requiring cofactor	2.31E-05
21	GO:0006418: tRNA aminoacylation for protein translation	8.32E-05
22	GO:1901259: chloroplast rRNA processing	1.34E-04
23	GO:0045454: cell redox homeostasis	1.35E-04
24	GO:0009793: embryo development ending in seed dormancy	1.72E-04
25	GO:0000413: protein peptidyl-prolyl isomerization	1.78E-04
26	GO:0042255: ribosome assembly	2.25E-04
27	GO:0006353: DNA-templated transcription, termination	2.25E-04
28	GO:0006430: lysyl-tRNA aminoacylation	2.46E-04
29	GO:0071588: hydrogen peroxide mediated signaling pathway	2.46E-04
30	GO:0060627: regulation of vesicle-mediated transport	2.46E-04
31	GO:0043489: RNA stabilization	2.46E-04
32	GO:0071482: cellular response to light stimulus	2.78E-04
33	GO:0032502: developmental process	2.91E-04
34	GO:0010027: thylakoid membrane organization	4.34E-04
35	GO:0006352: DNA-templated transcription, initiation	5.39E-04
36	GO:0006568: tryptophan metabolic process	5.44E-04
37	GO:0043039: tRNA aminoacylation	5.44E-04
38	GO:0006423: cysteinyl-tRNA aminoacylation	5.44E-04
39	GO:0071258: cellular response to gravity	5.44E-04
40	GO:0009790: embryo development	7.32E-04
41	GO:0042742: defense response to bacterium	8.44E-04
42	GO:0006518: peptide metabolic process	8.83E-04
43	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	8.83E-04
44	GO:2001295: malonyl-CoA biosynthetic process	8.83E-04
45	GO:0007017: microtubule-based process	1.19E-03
46	GO:0015729: oxaloacetate transport	1.26E-03
47	GO:0006241: CTP biosynthetic process	1.26E-03
48	GO:0019048: modulation by virus of host morphology or physiology	1.26E-03
49	GO:0006165: nucleoside diphosphate phosphorylation	1.26E-03
50	GO:0006424: glutamyl-tRNA aminoacylation	1.26E-03
51	GO:0006228: UTP biosynthetic process	1.26E-03
52	GO:0031048: chromatin silencing by small RNA	1.26E-03
53	GO:0010088: phloem development	1.26E-03
54	GO:0006986: response to unfolded protein	1.26E-03
55	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	1.26E-03
56	GO:2001141: regulation of RNA biosynthetic process	1.26E-03
57	GO:0009409: response to cold	1.63E-03
58	GO:0019676: ammonia assimilation cycle	1.68E-03
59	GO:0015743: malate transport	1.68E-03
60	GO:0006183: GTP biosynthetic process	1.68E-03
61	GO:0051567: histone H3-K9 methylation	1.68E-03
62	GO:0006021: inositol biosynthetic process	1.68E-03
63	GO:0044206: UMP salvage	1.68E-03
64	GO:0071483: cellular response to blue light	1.68E-03
65	GO:0006808: regulation of nitrogen utilization	1.68E-03
66	GO:0006096: glycolytic process	2.02E-03
67	GO:0048359: mucilage metabolic process involved in seed coat development	2.15E-03
68	GO:0071423: malate transmembrane transport	2.15E-03
69	GO:0032543: mitochondrial translation	2.15E-03
70	GO:0043097: pyrimidine nucleoside salvage	2.15E-03
71	GO:0010236: plastoquinone biosynthetic process	2.15E-03
72	GO:0045038: protein import into chloroplast thylakoid membrane	2.15E-03
73	GO:0031365: N-terminal protein amino acid modification	2.15E-03
74	GO:0042549: photosystem II stabilization	2.65E-03
75	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	2.65E-03
76	GO:0006206: pyrimidine nucleobase metabolic process	2.65E-03
77	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	2.65E-03
78	GO:0016458: gene silencing	2.65E-03
79	GO:0006014: D-ribose metabolic process	2.65E-03
80	GO:0006354: DNA-templated transcription, elongation	2.65E-03
81	GO:0009955: adaxial/abaxial pattern specification	3.18E-03
82	GO:0042026: protein refolding	3.18E-03
83	GO:0042372: phylloquinone biosynthetic process	3.18E-03
84	GO:0010019: chloroplast-nucleus signaling pathway	3.18E-03
85	GO:0010555: response to mannitol	3.18E-03
86	GO:0009772: photosynthetic electron transport in photosystem II	3.75E-03
87	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	3.75E-03
88	GO:0009642: response to light intensity	4.35E-03
89	GO:0000028: ribosomal small subunit assembly	4.35E-03
90	GO:0000105: histidine biosynthetic process	4.35E-03
91	GO:0015995: chlorophyll biosynthetic process	4.43E-03
92	GO:0009817: defense response to fungus, incompatible interaction	4.90E-03
93	GO:0048481: plant ovule development	4.90E-03
94	GO:0006526: arginine biosynthetic process	4.98E-03
95	GO:0006783: heme biosynthetic process	5.65E-03
96	GO:0015780: nucleotide-sugar transport	5.65E-03
97	GO:0009631: cold acclimation	5.67E-03
98	GO:0043067: regulation of programmed cell death	6.33E-03
99	GO:0006779: porphyrin-containing compound biosynthetic process	6.33E-03
100	GO:0031425: chloroplast RNA processing	6.33E-03
101	GO:0034599: cellular response to oxidative stress	6.50E-03
102	GO:0006949: syncytium formation	7.06E-03
103	GO:0006782: protoporphyrinogen IX biosynthetic process	7.06E-03
104	GO:0030422: production of siRNA involved in RNA interference	7.06E-03
105	GO:0045036: protein targeting to chloroplast	7.06E-03
106	GO:0009773: photosynthetic electron transport in photosystem I	7.80E-03
107	GO:0009073: aromatic amino acid family biosynthetic process	7.80E-03
108	GO:0043085: positive regulation of catalytic activity	7.80E-03
109	GO:0006415: translational termination	7.80E-03
110	GO:0018119: peptidyl-cysteine S-nitrosylation	7.80E-03
111	GO:0006790: sulfur compound metabolic process	8.58E-03
112	GO:0045037: protein import into chloroplast stroma	8.58E-03
113	GO:0006006: glucose metabolic process	9.38E-03
114	GO:0010207: photosystem II assembly	1.02E-02
115	GO:0019253: reductive pentose-phosphate cycle	1.02E-02
116	GO:0006813: potassium ion transport	1.08E-02
117	GO:0090351: seedling development	1.11E-02
118	GO:0046854: phosphatidylinositol phosphorylation	1.11E-02
119	GO:0019344: cysteine biosynthetic process	1.29E-02
120	GO:0009116: nucleoside metabolic process	1.29E-02
121	GO:0000027: ribosomal large subunit assembly	1.29E-02
122	GO:0015979: photosynthesis	1.39E-02
123	GO:0006306: DNA methylation	1.47E-02
124	GO:0009624: response to nematode	1.54E-02
125	GO:0007005: mitochondrion organization	1.57E-02
126	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.67E-02
127	GO:0009411: response to UV	1.67E-02
128	GO:0019722: calcium-mediated signaling	1.77E-02
129	GO:0000226: microtubule cytoskeleton organization	1.99E-02
130	GO:0042335: cuticle development	1.99E-02
131	GO:0008033: tRNA processing	1.99E-02
132	GO:0006342: chromatin silencing	2.09E-02
133	GO:0006520: cellular amino acid metabolic process	2.09E-02
134	GO:0006662: glycerol ether metabolic process	2.09E-02
135	GO:0010197: polar nucleus fusion	2.09E-02
136	GO:0007018: microtubule-based movement	2.21E-02
137	GO:0006814: sodium ion transport	2.21E-02
138	GO:0019252: starch biosynthetic process	2.32E-02
139	GO:0000302: response to reactive oxygen species	2.43E-02
140	GO:0016032: viral process	2.55E-02
141	GO:0009828: plant-type cell wall loosening	2.79E-02
142	GO:0071805: potassium ion transmembrane transport	2.91E-02
143	GO:0007267: cell-cell signaling	2.91E-02
144	GO:0051607: defense response to virus	3.04E-02
145	GO:0008380: RNA splicing	3.19E-02
146	GO:0009816: defense response to bacterium, incompatible interaction	3.29E-02
147	GO:0009627: systemic acquired resistance	3.42E-02
148	GO:0008219: cell death	3.82E-02
149	GO:0006499: N-terminal protein myristoylation	4.10E-02
150	GO:0006811: ion transport	4.10E-02
151	GO:0045087: innate immune response	4.52E-02
152	GO:0016051: carbohydrate biosynthetic process	4.52E-02
153	GO:0009637: response to blue light	4.52E-02
154	GO:0030001: metal ion transport	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0015139: alpha-ketoglutarate transmembrane transporter activity	0.00E+00
2	GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity	0.00E+00
3	GO:0052834: inositol monophosphate phosphatase activity	0.00E+00
4	GO:0005048: signal sequence binding	0.00E+00
5	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
6	GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity	0.00E+00
7	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	0.00E+00
8	GO:0016631: enoyl-[acyl-carrier-protein] reductase activity	0.00E+00
9	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
10	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
11	GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity	0.00E+00
12	GO:0004822: isoleucine-tRNA ligase activity	0.00E+00
13	GO:0004401: histidinol-phosphatase activity	0.00E+00
14	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
15	GO:0019843: rRNA binding	5.84E-30
16	GO:0003735: structural constituent of ribosome	1.57E-19
17	GO:0051920: peroxiredoxin activity	1.21E-08
18	GO:0016209: antioxidant activity	4.33E-08
19	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	7.15E-07
20	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	2.80E-06
21	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	1.02E-05
22	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	2.31E-05
23	GO:0001053: plastid sigma factor activity	4.19E-05
24	GO:0016987: sigma factor activity	4.19E-05
25	GO:0051082: unfolded protein binding	4.67E-05
26	GO:0004812: aminoacyl-tRNA ligase activity	1.60E-04
27	GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity	2.46E-04
28	GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity	2.46E-04
29	GO:0004425: indole-3-glycerol-phosphate synthase activity	2.46E-04
30	GO:0004824: lysine-tRNA ligase activity	2.46E-04
31	GO:0004831: tyrosine-tRNA ligase activity	2.46E-04
32	GO:0004655: porphobilinogen synthase activity	2.46E-04
33	GO:0010347: L-galactose-1-phosphate phosphatase activity	2.46E-04
34	GO:0004601: peroxidase activity	3.55E-04
35	GO:0052832: inositol monophosphate 3-phosphatase activity	5.44E-04
36	GO:0004817: cysteine-tRNA ligase activity	5.44E-04
37	GO:0000774: adenyl-nucleotide exchange factor activity	5.44E-04
38	GO:0008934: inositol monophosphate 1-phosphatase activity	5.44E-04
39	GO:0052833: inositol monophosphate 4-phosphatase activity	5.44E-04
40	GO:0015367: oxoglutarate:malate antiporter activity	5.44E-04
41	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	5.44E-04
42	GO:0008266: poly(U) RNA binding	7.88E-04
43	GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity	8.83E-04
44	GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity	8.83E-04
45	GO:0017150: tRNA dihydrouridine synthase activity	8.83E-04
46	GO:0002161: aminoacyl-tRNA editing activity	8.83E-04
47	GO:0004148: dihydrolipoyl dehydrogenase activity	8.83E-04
48	GO:0004075: biotin carboxylase activity	8.83E-04
49	GO:0030267: glyoxylate reductase (NADP) activity	8.83E-04
50	GO:0051087: chaperone binding	1.19E-03
51	GO:0015131: oxaloacetate transmembrane transporter activity	1.26E-03
52	GO:0016149: translation release factor activity, codon specific	1.26E-03
53	GO:0035197: siRNA binding	1.26E-03
54	GO:0004550: nucleoside diphosphate kinase activity	1.26E-03
55	GO:0043023: ribosomal large subunit binding	1.26E-03
56	GO:0008097: 5S rRNA binding	1.26E-03
57	GO:0005507: copper ion binding	1.45E-03
58	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.63E-03
59	GO:0004845: uracil phosphoribosyltransferase activity	1.68E-03
60	GO:0016836: hydro-lyase activity	1.68E-03
61	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	1.68E-03
62	GO:0003727: single-stranded RNA binding	1.68E-03
63	GO:0004659: prenyltransferase activity	1.68E-03
64	GO:0016773: phosphotransferase activity, alcohol group as acceptor	2.15E-03
65	GO:0004040: amidase activity	2.15E-03
66	GO:0003989: acetyl-CoA carboxylase activity	2.15E-03
67	GO:0004130: cytochrome-c peroxidase activity	2.65E-03
68	GO:0016688: L-ascorbate peroxidase activity	2.65E-03
69	GO:0008200: ion channel inhibitor activity	2.65E-03
70	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	3.18E-03
71	GO:0102391: decanoate--CoA ligase activity	3.18E-03
72	GO:0004849: uridine kinase activity	3.18E-03
73	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	3.18E-03
74	GO:0004747: ribokinase activity	3.18E-03
75	GO:0005200: structural constituent of cytoskeleton	3.35E-03
76	GO:0016831: carboxy-lyase activity	3.75E-03
77	GO:0008235: metalloexopeptidase activity	3.75E-03
78	GO:0015140: malate transmembrane transporter activity	3.75E-03
79	GO:0004467: long-chain fatty acid-CoA ligase activity	3.75E-03
80	GO:0008312: 7S RNA binding	4.35E-03
81	GO:0052747: sinapyl alcohol dehydrogenase activity	4.35E-03
82	GO:0004033: aldo-keto reductase (NADP) activity	4.35E-03
83	GO:0008865: fructokinase activity	4.35E-03
84	GO:0003924: GTPase activity	4.57E-03
85	GO:0004222: metalloendopeptidase activity	5.41E-03
86	GO:0003747: translation release factor activity	5.65E-03
87	GO:0003746: translation elongation factor activity	6.21E-03
88	GO:0047617: acyl-CoA hydrolase activity	6.33E-03
89	GO:0003729: mRNA binding	6.37E-03
90	GO:0005525: GTP binding	6.82E-03
91	GO:0008047: enzyme activator activity	7.06E-03
92	GO:0044183: protein binding involved in protein folding	7.80E-03
93	GO:0004177: aminopeptidase activity	7.80E-03
94	GO:0004521: endoribonuclease activity	8.58E-03
95	GO:0000049: tRNA binding	8.58E-03
96	GO:0045551: cinnamyl-alcohol dehydrogenase activity	8.58E-03
97	GO:0008081: phosphoric diester hydrolase activity	9.38E-03
98	GO:0031072: heat shock protein binding	9.38E-03
99	GO:0051287: NAD binding	9.71E-03
100	GO:0003690: double-stranded DNA binding	1.12E-02
101	GO:0005528: FK506 binding	1.29E-02
102	GO:0003723: RNA binding	1.30E-02
103	GO:0015079: potassium ion transmembrane transporter activity	1.38E-02
104	GO:0008324: cation transmembrane transporter activity	1.38E-02
105	GO:0030570: pectate lyase activity	1.67E-02
106	GO:0008514: organic anion transmembrane transporter activity	1.77E-02
107	GO:0047134: protein-disulfide reductase activity	1.88E-02
108	GO:0008080: N-acetyltransferase activity	2.09E-02
109	GO:0004791: thioredoxin-disulfide reductase activity	2.21E-02
110	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.67E-02
111	GO:0008237: metallopeptidase activity	2.91E-02
112	GO:0008236: serine-type peptidase activity	3.69E-02
113	GO:0000287: magnesium ion binding	4.05E-02
114	GO:0050661: NADP binding	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0005835: fatty acid synthase complex	0.00E+00
2	GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex	0.00E+00
3	GO:0009547: plastid ribosome	0.00E+00
4	GO:0009570: chloroplast stroma	2.10E-78
5	GO:0009507: chloroplast	2.91E-69
6	GO:0009941: chloroplast envelope	2.71E-50
7	GO:0009579: thylakoid	9.22E-29
8	GO:0005840: ribosome	6.96E-19
9	GO:0009534: chloroplast thylakoid	3.55E-11
10	GO:0009535: chloroplast thylakoid membrane	2.52E-10
11	GO:0031977: thylakoid lumen	3.12E-10
12	GO:0009543: chloroplast thylakoid lumen	6.96E-10
13	GO:0009536: plastid	3.24E-07
14	GO:0022626: cytosolic ribosome	2.31E-05
15	GO:0000311: plastid large ribosomal subunit	2.81E-05
16	GO:0000428: DNA-directed RNA polymerase complex	2.46E-04
17	GO:0045298: tubulin complex	3.36E-04
18	GO:0010319: stromule	3.73E-04
19	GO:0009295: nucleoid	3.73E-04
20	GO:0030529: intracellular ribonucleoprotein complex	4.34E-04
21	GO:0080085: signal recognition particle, chloroplast targeting	5.44E-04
22	GO:0015934: large ribosomal subunit	7.31E-04
23	GO:0000312: plastid small ribosomal subunit	7.88E-04
24	GO:0016020: membrane	9.56E-04
25	GO:0005875: microtubule associated complex	9.77E-04
26	GO:0009654: photosystem II oxygen evolving complex	1.19E-03
27	GO:0005719: nuclear euchromatin	1.26E-03
28	GO:0015935: small ribosomal subunit	1.30E-03
29	GO:0046658: anchored component of plasma membrane	1.43E-03
30	GO:0048046: apoplast	1.88E-03
31	GO:0009706: chloroplast inner membrane	2.56E-03
32	GO:0005739: mitochondrion	3.30E-03
33	GO:0009533: chloroplast stromal thylakoid	3.75E-03
34	GO:0005759: mitochondrial matrix	4.54E-03
35	GO:0009539: photosystem II reaction center	4.98E-03
36	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	4.98E-03
37	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	5.65E-03
38	GO:0005763: mitochondrial small ribosomal subunit	5.65E-03
39	GO:0015030: Cajal body	6.33E-03
40	GO:0009508: plastid chromosome	9.38E-03
41	GO:0030095: chloroplast photosystem II	1.02E-02
42	GO:0031969: chloroplast membrane	1.17E-02
43	GO:0042651: thylakoid membrane	1.38E-02
44	GO:0009505: plant-type cell wall	1.45E-02
45	GO:0009532: plastid stroma	1.47E-02
46	GO:0005871: kinesin complex	1.88E-02
47	GO:0005623: cell	1.99E-02
48	GO:0019898: extrinsic component of membrane	2.32E-02
49	GO:0022627: cytosolic small ribosomal subunit	3.54E-02
50	GO:0005874: microtubule	4.93E-02