co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G32765

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009264: deoxyribonucleotide catabolic process	0.00E+00
2	GO:0006792: regulation of sulfur utilization	0.00E+00
3	GO:0009715: chalcone biosynthetic process	0.00E+00
4	GO:1901038: cyanidin 3-O-glucoside metabolic process	0.00E+00
5	GO:0010423: negative regulation of brassinosteroid biosynthetic process	0.00E+00
6	GO:0080167: response to karrikin	1.04E-08
7	GO:0051555: flavonol biosynthetic process	1.13E-07
8	GO:0009813: flavonoid biosynthetic process	1.17E-06
9	GO:0010218: response to far red light	1.33E-06
10	GO:0010224: response to UV-B	8.85E-06
11	GO:0009963: positive regulation of flavonoid biosynthetic process	1.44E-05
12	GO:0010114: response to red light	6.95E-05
13	GO:0071555: cell wall organization	7.38E-05
14	GO:0009751: response to salicylic acid	8.67E-05
15	GO:0010076: maintenance of floral meristem identity	8.84E-05
16	GO:0030154: cell differentiation	9.54E-05
17	GO:0045489: pectin biosynthetic process	1.16E-04
18	GO:0030162: regulation of proteolysis	1.51E-04
19	GO:0033481: galacturonate biosynthetic process	1.88E-04
20	GO:0051973: positive regulation of telomerase activity	1.88E-04
21	GO:0048438: floral whorl development	1.88E-04
22	GO:1901537: positive regulation of DNA demethylation	1.88E-04
23	GO:0031539: positive regulation of anthocyanin metabolic process	1.88E-04
24	GO:0050691: regulation of defense response to virus by host	1.88E-04
25	GO:0000272: polysaccharide catabolic process	3.73E-04
26	GO:0071497: cellular response to freezing	4.24E-04
27	GO:0010220: positive regulation of vernalization response	4.24E-04
28	GO:1900386: positive regulation of flavonol biosynthetic process	4.24E-04
29	GO:0071395: cellular response to jasmonic acid stimulus	4.24E-04
30	GO:0071712: ER-associated misfolded protein catabolic process	4.24E-04
31	GO:0009629: response to gravity	4.24E-04
32	GO:0019388: galactose catabolic process	4.24E-04
33	GO:0007154: cell communication	4.24E-04
34	GO:0009733: response to auxin	4.64E-04
35	GO:0009718: anthocyanin-containing compound biosynthetic process	4.86E-04
36	GO:0007623: circadian rhythm	5.30E-04
37	GO:0009753: response to jasmonic acid	6.05E-04
38	GO:0009225: nucleotide-sugar metabolic process	6.12E-04
39	GO:0010253: UDP-rhamnose biosynthetic process	6.92E-04
40	GO:0040009: regulation of growth rate	6.92E-04
41	GO:0009926: auxin polar transport	7.03E-04
42	GO:0031347: regulation of defense response	8.92E-04
43	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	8.92E-04
44	GO:1902358: sulfate transmembrane transport	9.86E-04
45	GO:0009743: response to carbohydrate	9.86E-04
46	GO:0009590: detection of gravity	9.86E-04
47	GO:0010017: red or far-red light signaling pathway	9.89E-04
48	GO:0009411: response to UV	1.07E-03
49	GO:0009909: regulation of flower development	1.15E-03
50	GO:0034613: cellular protein localization	1.31E-03
51	GO:0048442: sepal development	1.31E-03
52	GO:0009765: photosynthesis, light harvesting	1.31E-03
53	GO:0000271: polysaccharide biosynthetic process	1.36E-03
54	GO:0009741: response to brassinosteroid	1.46E-03
55	GO:0009958: positive gravitropism	1.46E-03
56	GO:0010200: response to chitin	1.49E-03
57	GO:0010438: cellular response to sulfur starvation	1.66E-03
58	GO:0071368: cellular response to cytokinin stimulus	1.66E-03
59	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.80E-03
60	GO:0010304: PSII associated light-harvesting complex II catabolic process	2.05E-03
61	GO:0042732: D-xylose metabolic process	2.05E-03
62	GO:0010315: auxin efflux	2.05E-03
63	GO:0000060: protein import into nucleus, translocation	2.05E-03
64	GO:0006796: phosphate-containing compound metabolic process	2.05E-03
65	GO:0010077: maintenance of inflorescence meristem identity	2.46E-03
66	GO:0017148: negative regulation of translation	2.46E-03
67	GO:0006400: tRNA modification	2.90E-03
68	GO:0051510: regulation of unidimensional cell growth	2.90E-03
69	GO:0050829: defense response to Gram-negative bacterium	2.90E-03
70	GO:0031540: regulation of anthocyanin biosynthetic process	3.36E-03
71	GO:0005978: glycogen biosynthetic process	3.36E-03
72	GO:0009787: regulation of abscisic acid-activated signaling pathway	3.36E-03
73	GO:0010439: regulation of glucosinolate biosynthetic process	3.36E-03
74	GO:0009739: response to gibberellin	3.64E-03
75	GO:0010099: regulation of photomorphogenesis	3.84E-03
76	GO:0022900: electron transport chain	3.84E-03
77	GO:0009637: response to blue light	4.26E-03
78	GO:0016051: carbohydrate biosynthetic process	4.26E-03
79	GO:0006355: regulation of transcription, DNA-templated	4.69E-03
80	GO:0009638: phototropism	4.87E-03
81	GO:0010018: far-red light signaling pathway	4.87E-03
82	GO:0042542: response to hydrogen peroxide	5.26E-03
83	GO:0043069: negative regulation of programmed cell death	5.42E-03
84	GO:0048441: petal development	5.42E-03
85	GO:0042546: cell wall biogenesis	5.70E-03
86	GO:0048229: gametophyte development	5.99E-03
87	GO:0000038: very long-chain fatty acid metabolic process	5.99E-03
88	GO:0009698: phenylpropanoid metabolic process	5.99E-03
89	GO:1903507: negative regulation of nucleic acid-templated transcription	5.99E-03
90	GO:0016024: CDP-diacylglycerol biosynthetic process	6.58E-03
91	GO:0010582: floral meristem determinacy	6.58E-03
92	GO:0000165: MAPK cascade	6.63E-03
93	GO:0006006: glucose metabolic process	7.19E-03
94	GO:0030036: actin cytoskeleton organization	7.19E-03
95	GO:0018107: peptidyl-threonine phosphorylation	7.19E-03
96	GO:0009809: lignin biosynthetic process	7.38E-03
97	GO:0009585: red, far-red light phototransduction	7.38E-03
98	GO:0010223: secondary shoot formation	7.82E-03
99	GO:0009934: regulation of meristem structural organization	7.82E-03
100	GO:0034605: cellular response to heat	7.82E-03
101	GO:0010143: cutin biosynthetic process	7.82E-03
102	GO:0048440: carpel development	7.82E-03
103	GO:0002237: response to molecule of bacterial origin	7.82E-03
104	GO:0010167: response to nitrate	8.47E-03
105	GO:0042753: positive regulation of circadian rhythm	9.14E-03
106	GO:0006487: protein N-linked glycosylation	9.83E-03
107	GO:0019953: sexual reproduction	1.05E-02
108	GO:0009768: photosynthesis, light harvesting in photosystem I	1.05E-02
109	GO:0009742: brassinosteroid mediated signaling pathway	1.12E-02
110	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.20E-02
111	GO:0040007: growth	1.28E-02
112	GO:0010584: pollen exine formation	1.35E-02
113	GO:0048443: stamen development	1.35E-02
114	GO:0019722: calcium-mediated signaling	1.35E-02
115	GO:0042127: regulation of cell proliferation	1.35E-02
116	GO:0009845: seed germination	1.43E-02
117	GO:0016117: carotenoid biosynthetic process	1.43E-02
118	GO:0048653: anther development	1.51E-02
119	GO:0010182: sugar mediated signaling pathway	1.60E-02
120	GO:0019252: starch biosynthetic process	1.77E-02
121	GO:0009791: post-embryonic development	1.77E-02
122	GO:0002229: defense response to oomycetes	1.85E-02
123	GO:0010583: response to cyclopentenone	1.94E-02
124	GO:1901657: glycosyl compound metabolic process	2.03E-02
125	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.04E-02
126	GO:0009828: plant-type cell wall loosening	2.13E-02
127	GO:0010252: auxin homeostasis	2.13E-02
128	GO:0007267: cell-cell signaling	2.22E-02
129	GO:0009911: positive regulation of flower development	2.41E-02
130	GO:0001666: response to hypoxia	2.41E-02
131	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.51E-02
132	GO:0009611: response to wounding	2.52E-02
133	GO:0045944: positive regulation of transcription from RNA polymerase II promoter	2.62E-02
134	GO:0006351: transcription, DNA-templated	2.69E-02
135	GO:0048573: photoperiodism, flowering	2.71E-02
136	GO:0010411: xyloglucan metabolic process	2.71E-02
137	GO:0009826: unidimensional cell growth	2.72E-02
138	GO:0016311: dephosphorylation	2.81E-02
139	GO:0018298: protein-chromophore linkage	2.91E-02
140	GO:0045893: positive regulation of transcription, DNA-templated	2.91E-02
141	GO:0010311: lateral root formation	3.02E-02
142	GO:0009860: pollen tube growth	3.04E-02
143	GO:0048527: lateral root development	3.23E-02
144	GO:0010119: regulation of stomatal movement	3.23E-02
145	GO:0009723: response to ethylene	3.27E-02
146	GO:0005975: carbohydrate metabolic process	3.28E-02
147	GO:0009640: photomorphogenesis	4.13E-02
148	GO:0045454: cell redox homeostasis	4.18E-02
149	GO:0008643: carbohydrate transport	4.36E-02

Rank	GO Term	Adjusted P value
1	GO:0102580: cyanidin 3-O-glucoside 2-O''-xylosyltransferase activity	0.00E+00
2	GO:0047890: flavanone 4-reductase activity	0.00E+00
3	GO:0045486: naringenin 3-dioxygenase activity	0.00E+00
4	GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity	0.00E+00
5	GO:0045552: dihydrokaempferol 4-reductase activity	0.00E+00
6	GO:0016210: naringenin-chalcone synthase activity	0.00E+00
7	GO:0045430: chalcone isomerase activity	2.66E-05
8	GO:0016161: beta-amylase activity	8.84E-05
9	GO:0016621: cinnamoyl-CoA reductase activity	1.18E-04
10	GO:0080132: fatty acid alpha-hydroxylase activity	1.88E-04
11	GO:0010313: phytochrome binding	1.88E-04
12	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	3.92E-04
13	GO:0004566: beta-glucuronidase activity	4.24E-04
14	GO:0044390: ubiquitin-like protein conjugating enzyme binding	4.24E-04
15	GO:0016868: intramolecular transferase activity, phosphotransferases	4.24E-04
16	GO:0008460: dTDP-glucose 4,6-dehydratase activity	4.24E-04
17	GO:0010280: UDP-L-rhamnose synthase activity	4.24E-04
18	GO:0050377: UDP-glucose 4,6-dehydratase activity	4.24E-04
19	GO:0048531: beta-1,3-galactosyltransferase activity	4.24E-04
20	GO:0004614: phosphoglucomutase activity	4.24E-04
21	GO:0003712: transcription cofactor activity	6.12E-04
22	GO:0008253: 5'-nucleotidase activity	6.92E-04
23	GO:0031418: L-ascorbic acid binding	7.52E-04
24	GO:0048027: mRNA 5'-UTR binding	9.86E-04
25	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	9.86E-04
26	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	9.89E-04
27	GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway	1.31E-03
28	GO:0080032: methyl jasmonate esterase activity	1.31E-03
29	GO:0098599: palmitoyl hydrolase activity	1.31E-03
30	GO:0046527: glucosyltransferase activity	1.31E-03
31	GO:0050378: UDP-glucuronate 4-epimerase activity	1.31E-03
32	GO:0004402: histone acetyltransferase activity	1.36E-03
33	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.41E-03
34	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.41E-03
35	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.61E-03
36	GO:0045431: flavonol synthase activity	1.66E-03
37	GO:0016757: transferase activity, transferring glycosyl groups	1.77E-03
38	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	2.05E-03
39	GO:0080030: methyl indole-3-acetate esterase activity	2.05E-03
40	GO:0008474: palmitoyl-(protein) hydrolase activity	2.05E-03
41	GO:0008429: phosphatidylethanolamine binding	2.05E-03
42	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	2.05E-03
43	GO:0102229: amylopectin maltohydrolase activity	2.05E-03
44	GO:0016462: pyrophosphatase activity	2.05E-03
45	GO:0035252: UDP-xylosyltransferase activity	2.05E-03
46	GO:0004427: inorganic diphosphatase activity	2.90E-03
47	GO:0019899: enzyme binding	2.90E-03
48	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.04E-03
49	GO:0008271: secondary active sulfate transmembrane transporter activity	3.84E-03
50	GO:0016207: 4-coumarate-CoA ligase activity	4.35E-03
51	GO:0043565: sequence-specific DNA binding	4.65E-03
52	GO:0009672: auxin:proton symporter activity	4.87E-03
53	GO:0044212: transcription regulatory region DNA binding	5.02E-03
54	GO:0046982: protein heterodimerization activity	5.37E-03
55	GO:0003677: DNA binding	5.95E-03
56	GO:0008327: methyl-CpG binding	5.99E-03
57	GO:0004860: protein kinase inhibitor activity	5.99E-03
58	GO:0015116: sulfate transmembrane transporter activity	6.58E-03
59	GO:0010329: auxin efflux transmembrane transporter activity	7.19E-03
60	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	7.82E-03
61	GO:0031625: ubiquitin protein ligase binding	8.18E-03
62	GO:0031409: pigment binding	9.14E-03
63	GO:0003714: transcription corepressor activity	9.83E-03
64	GO:0004176: ATP-dependent peptidase activity	1.13E-02
65	GO:0016758: transferase activity, transferring hexosyl groups	1.28E-02
66	GO:0005515: protein binding	1.40E-02
67	GO:0001085: RNA polymerase II transcription factor binding	1.60E-02
68	GO:0016853: isomerase activity	1.68E-02
69	GO:0050662: coenzyme binding	1.68E-02
70	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.85E-02
71	GO:0004518: nuclease activity	1.94E-02
72	GO:0003824: catalytic activity	2.04E-02
73	GO:0008194: UDP-glycosyltransferase activity	2.04E-02
74	GO:0016887: ATPase activity	2.07E-02
75	GO:0016759: cellulose synthase activity	2.13E-02
76	GO:0016791: phosphatase activity	2.13E-02
77	GO:0005200: structural constituent of cytoskeleton	2.22E-02
78	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.22E-02
79	GO:0008237: metallopeptidase activity	2.22E-02
80	GO:0016168: chlorophyll binding	2.51E-02
81	GO:0008375: acetylglucosaminyltransferase activity	2.61E-02
82	GO:0016491: oxidoreductase activity	2.67E-02
83	GO:0102483: scopolin beta-glucosidase activity	2.71E-02
84	GO:0030247: polysaccharide binding	2.71E-02
85	GO:0000287: magnesium ion binding	2.77E-02
86	GO:0016788: hydrolase activity, acting on ester bonds	2.88E-02
87	GO:0004222: metalloendopeptidase activity	3.12E-02
88	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	3.23E-02
89	GO:0008422: beta-glucosidase activity	3.67E-02
90	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	4.18E-02
91	GO:0051537: 2 iron, 2 sulfur cluster binding	4.36E-02
92	GO:0015293: symporter activity	4.48E-02
93	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	4.65E-02

Rank	GO Term	Adjusted P value
1	GO:0090568: nuclear transcriptional repressor complex	0.00E+00
2	GO:0042406: extrinsic component of endoplasmic reticulum membrane	6.26E-06
3	GO:0009505: plant-type cell wall	5.94E-04
4	GO:0031225: anchored component of membrane	8.18E-04
5	GO:0036513: Derlin-1 retrotranslocation complex	9.86E-04
6	GO:0010369: chromocenter	2.46E-03
7	GO:0019005: SCF ubiquitin ligase complex	3.36E-03
8	GO:0005615: extracellular space	3.64E-03
9	GO:0046658: anchored component of plasma membrane	4.51E-03
10	GO:0005765: lysosomal membrane	5.99E-03
11	GO:0030076: light-harvesting complex	8.47E-03
12	GO:0043231: intracellular membrane-bounded organelle	1.34E-02
13	GO:0009522: photosystem I	1.68E-02
14	GO:0048046: apoplast	1.70E-02
15	GO:0005794: Golgi apparatus	1.75E-02
16	GO:0009523: photosystem II	1.77E-02
17	GO:0009705: plant-type vacuole membrane	1.83E-02
18	GO:0071944: cell periphery	2.03E-02
19	GO:0032580: Golgi cisterna membrane	2.13E-02
20	GO:0010319: stromule	2.22E-02
21	GO:0005783: endoplasmic reticulum	2.40E-02
22	GO:0005667: transcription factor complex	2.61E-02
23	GO:0000139: Golgi membrane	2.78E-02
24	GO:0000786: nucleosome	3.34E-02
25	GO:0009506: plasmodesma	4.01E-02
26	GO:0005856: cytoskeleton	4.48E-02