GO Enrichment Analysis of Co-expressed Genes with
AT2G32480
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 2 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 3 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 4 | GO:0019253: reductive pentose-phosphate cycle | 8.17E-11 |
| 5 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 2.37E-07 |
| 6 | GO:0006000: fructose metabolic process | 9.10E-07 |
| 7 | GO:0018119: peptidyl-cysteine S-nitrosylation | 9.37E-07 |
| 8 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 2.19E-06 |
| 9 | GO:0019464: glycine decarboxylation via glycine cleavage system | 4.21E-06 |
| 10 | GO:0006546: glycine catabolic process | 4.21E-06 |
| 11 | GO:0071482: cellular response to light stimulus | 3.64E-05 |
| 12 | GO:0006002: fructose 6-phosphate metabolic process | 3.64E-05 |
| 13 | GO:1901349: glucosinolate transport | 6.42E-05 |
| 14 | GO:0090449: phloem glucosinolate loading | 6.42E-05 |
| 15 | GO:0009443: pyridoxal 5'-phosphate salvage | 6.42E-05 |
| 16 | GO:0009773: photosynthetic electron transport in photosystem I | 7.90E-05 |
| 17 | GO:0000272: polysaccharide catabolic process | 7.90E-05 |
| 18 | GO:0006094: gluconeogenesis | 1.07E-04 |
| 19 | GO:0005986: sucrose biosynthetic process | 1.07E-04 |
| 20 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 1.55E-04 |
| 21 | GO:0046686: response to cadmium ion | 1.56E-04 |
| 22 | GO:0015979: photosynthesis | 1.75E-04 |
| 23 | GO:0071492: cellular response to UV-A | 2.63E-04 |
| 24 | GO:0006696: ergosterol biosynthetic process | 2.63E-04 |
| 25 | GO:0016117: carotenoid biosynthetic process | 3.07E-04 |
| 26 | GO:0042631: cellular response to water deprivation | 3.32E-04 |
| 27 | GO:2001141: regulation of RNA biosynthetic process | 3.82E-04 |
| 28 | GO:0006020: inositol metabolic process | 3.82E-04 |
| 29 | GO:0045727: positive regulation of translation | 5.10E-04 |
| 30 | GO:0006021: inositol biosynthetic process | 5.10E-04 |
| 31 | GO:0009902: chloroplast relocation | 5.10E-04 |
| 32 | GO:0006542: glutamine biosynthetic process | 5.10E-04 |
| 33 | GO:0019676: ammonia assimilation cycle | 5.10E-04 |
| 34 | GO:0071486: cellular response to high light intensity | 5.10E-04 |
| 35 | GO:0009409: response to cold | 6.36E-04 |
| 36 | GO:0043097: pyrimidine nucleoside salvage | 6.45E-04 |
| 37 | GO:0009611: response to wounding | 6.78E-04 |
| 38 | GO:0006810: transport | 7.34E-04 |
| 39 | GO:0016554: cytidine to uridine editing | 7.90E-04 |
| 40 | GO:0006206: pyrimidine nucleobase metabolic process | 7.90E-04 |
| 41 | GO:0046855: inositol phosphate dephosphorylation | 7.90E-04 |
| 42 | GO:0009658: chloroplast organization | 8.69E-04 |
| 43 | GO:0009854: oxidative photosynthetic carbon pathway | 9.40E-04 |
| 44 | GO:0009853: photorespiration | 1.02E-03 |
| 45 | GO:0010196: nonphotochemical quenching | 1.10E-03 |
| 46 | GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway | 1.10E-03 |
| 47 | GO:0080167: response to karrikin | 1.13E-03 |
| 48 | GO:0007186: G-protein coupled receptor signaling pathway | 1.44E-03 |
| 49 | GO:0032544: plastid translation | 1.44E-03 |
| 50 | GO:0010206: photosystem II repair | 1.62E-03 |
| 51 | GO:1900865: chloroplast RNA modification | 1.81E-03 |
| 52 | GO:0006259: DNA metabolic process | 2.01E-03 |
| 53 | GO:0006096: glycolytic process | 2.04E-03 |
| 54 | GO:0006265: DNA topological change | 2.21E-03 |
| 55 | GO:0043085: positive regulation of catalytic activity | 2.21E-03 |
| 56 | GO:0006352: DNA-templated transcription, initiation | 2.21E-03 |
| 57 | GO:0006790: sulfur compound metabolic process | 2.42E-03 |
| 58 | GO:0009767: photosynthetic electron transport chain | 2.64E-03 |
| 59 | GO:0005985: sucrose metabolic process | 3.09E-03 |
| 60 | GO:0046854: phosphatidylinositol phosphorylation | 3.09E-03 |
| 61 | GO:0009735: response to cytokinin | 3.38E-03 |
| 62 | GO:0009416: response to light stimulus | 3.79E-03 |
| 63 | GO:0006874: cellular calcium ion homeostasis | 3.82E-03 |
| 64 | GO:0006662: glycerol ether metabolic process | 5.72E-03 |
| 65 | GO:0007059: chromosome segregation | 6.01E-03 |
| 66 | GO:0009791: post-embryonic development | 6.31E-03 |
| 67 | GO:0019252: starch biosynthetic process | 6.31E-03 |
| 68 | GO:0007264: small GTPase mediated signal transduction | 6.92E-03 |
| 69 | GO:0019760: glucosinolate metabolic process | 7.55E-03 |
| 70 | GO:0010027: thylakoid membrane organization | 8.54E-03 |
| 71 | GO:0055114: oxidation-reduction process | 8.95E-03 |
| 72 | GO:0042742: defense response to bacterium | 9.27E-03 |
| 73 | GO:0045454: cell redox homeostasis | 9.62E-03 |
| 74 | GO:0009817: defense response to fungus, incompatible interaction | 1.03E-02 |
| 75 | GO:0006811: ion transport | 1.10E-02 |
| 76 | GO:0007568: aging | 1.14E-02 |
| 77 | GO:0016051: carbohydrate biosynthetic process | 1.22E-02 |
| 78 | GO:0034599: cellular response to oxidative stress | 1.25E-02 |
| 79 | GO:0008152: metabolic process | 1.31E-02 |
| 80 | GO:0009644: response to high light intensity | 1.54E-02 |
| 81 | GO:0006364: rRNA processing | 1.80E-02 |
| 82 | GO:0006857: oligopeptide transport | 1.89E-02 |
| 83 | GO:0055085: transmembrane transport | 2.68E-02 |
| 84 | GO:0009058: biosynthetic process | 2.81E-02 |
| 85 | GO:0009845: seed germination | 2.86E-02 |
| 86 | GO:0007623: circadian rhythm | 3.41E-02 |
| 87 | GO:0010468: regulation of gene expression | 3.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 2 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 3 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 4 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 5 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 6 | GO:0051738: xanthophyll binding | 0.00E+00 |
| 7 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 8 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 9 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 2.37E-07 |
| 10 | GO:0004618: phosphoglycerate kinase activity | 2.37E-07 |
| 11 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 2.19E-06 |
| 12 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 4.21E-06 |
| 13 | GO:0048038: quinone binding | 1.68E-05 |
| 14 | GO:0004560: alpha-L-fucosidase activity | 6.42E-05 |
| 15 | GO:0051996: squalene synthase activity | 6.42E-05 |
| 16 | GO:0090448: glucosinolate:proton symporter activity | 6.42E-05 |
| 17 | GO:0008934: inositol monophosphate 1-phosphatase activity | 1.55E-04 |
| 18 | GO:0052833: inositol monophosphate 4-phosphatase activity | 1.55E-04 |
| 19 | GO:0008967: phosphoglycolate phosphatase activity | 1.55E-04 |
| 20 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 1.55E-04 |
| 21 | GO:0010297: heteropolysaccharide binding | 1.55E-04 |
| 22 | GO:0004047: aminomethyltransferase activity | 1.55E-04 |
| 23 | GO:0052832: inositol monophosphate 3-phosphatase activity | 1.55E-04 |
| 24 | GO:0022891: substrate-specific transmembrane transporter activity | 2.59E-04 |
| 25 | GO:0004148: dihydrolipoyl dehydrogenase activity | 2.63E-04 |
| 26 | GO:0070402: NADPH binding | 2.63E-04 |
| 27 | GO:0016987: sigma factor activity | 5.10E-04 |
| 28 | GO:0004930: G-protein coupled receptor activity | 5.10E-04 |
| 29 | GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity | 5.10E-04 |
| 30 | GO:0001053: plastid sigma factor activity | 5.10E-04 |
| 31 | GO:0008374: O-acyltransferase activity | 6.45E-04 |
| 32 | GO:0004356: glutamate-ammonia ligase activity | 6.45E-04 |
| 33 | GO:0016168: chlorophyll binding | 6.66E-04 |
| 34 | GO:0102229: amylopectin maltohydrolase activity | 7.90E-04 |
| 35 | GO:0042578: phosphoric ester hydrolase activity | 7.90E-04 |
| 36 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 9.40E-04 |
| 37 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 9.40E-04 |
| 38 | GO:0016161: beta-amylase activity | 9.40E-04 |
| 39 | GO:0004849: uridine kinase activity | 9.40E-04 |
| 40 | GO:0004033: aldo-keto reductase (NADP) activity | 1.26E-03 |
| 41 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 1.44E-03 |
| 42 | GO:0008135: translation factor activity, RNA binding | 1.44E-03 |
| 43 | GO:0008047: enzyme activator activity | 2.01E-03 |
| 44 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 2.11E-03 |
| 45 | GO:0008327: methyl-CpG binding | 2.21E-03 |
| 46 | GO:0008266: poly(U) RNA binding | 2.87E-03 |
| 47 | GO:0005217: intracellular ligand-gated ion channel activity | 3.09E-03 |
| 48 | GO:0004970: ionotropic glutamate receptor activity | 3.09E-03 |
| 49 | GO:0016740: transferase activity | 4.87E-03 |
| 50 | GO:0047134: protein-disulfide reductase activity | 5.15E-03 |
| 51 | GO:0050662: coenzyme binding | 6.01E-03 |
| 52 | GO:0004791: thioredoxin-disulfide reductase activity | 6.01E-03 |
| 53 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 7.24E-03 |
| 54 | GO:0050660: flavin adenine dinucleotide binding | 7.49E-03 |
| 55 | GO:0016759: cellulose synthase activity | 7.55E-03 |
| 56 | GO:0008483: transaminase activity | 7.88E-03 |
| 57 | GO:0008236: serine-type peptidase activity | 9.93E-03 |
| 58 | GO:0004222: metalloendopeptidase activity | 1.10E-02 |
| 59 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.14E-02 |
| 60 | GO:0050897: cobalt ion binding | 1.14E-02 |
| 61 | GO:0003924: GTPase activity | 1.19E-02 |
| 62 | GO:0003746: translation elongation factor activity | 1.22E-02 |
| 63 | GO:0009055: electron carrier activity | 1.27E-02 |
| 64 | GO:0051287: NAD binding | 1.66E-02 |
| 65 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.80E-02 |
| 66 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 2.16E-02 |
| 67 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 2.16E-02 |
| 68 | GO:0016746: transferase activity, transferring acyl groups | 2.36E-02 |
| 69 | GO:0015035: protein disulfide oxidoreductase activity | 2.36E-02 |
| 70 | GO:0019843: rRNA binding | 2.71E-02 |
| 71 | GO:0004252: serine-type endopeptidase activity | 2.92E-02 |
| 72 | GO:0005525: GTP binding | 3.48E-02 |
| 73 | GO:0008194: UDP-glycosyltransferase activity | 3.69E-02 |
| 74 | GO:0008168: methyltransferase activity | 4.52E-02 |
| 75 | GO:0003824: catalytic activity | 4.68E-02 |
| 76 | GO:0016788: hydrolase activity, acting on ester bonds | 4.71E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009575: chromoplast stroma | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 5.68E-23 |
| 3 | GO:0009570: chloroplast stroma | 5.28E-11 |
| 4 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.70E-09 |
| 5 | GO:0009579: thylakoid | 2.15E-09 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 3.66E-09 |
| 7 | GO:0048046: apoplast | 4.38E-08 |
| 8 | GO:0009941: chloroplast envelope | 1.59E-07 |
| 9 | GO:0010319: stromule | 5.03E-07 |
| 10 | GO:0005960: glycine cleavage complex | 2.19E-06 |
| 11 | GO:0009344: nitrite reductase complex [NAD(P)H] | 6.42E-05 |
| 12 | GO:0009534: chloroplast thylakoid | 1.36E-04 |
| 13 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 1.55E-04 |
| 14 | GO:0009523: photosystem II | 4.13E-04 |
| 15 | GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing) | 5.10E-04 |
| 16 | GO:0009517: PSII associated light-harvesting complex II | 5.10E-04 |
| 17 | GO:0016020: membrane | 2.21E-03 |
| 18 | GO:0000311: plastid large ribosomal subunit | 2.42E-03 |
| 19 | GO:0009706: chloroplast inner membrane | 2.45E-03 |
| 20 | GO:0030095: chloroplast photosystem II | 2.87E-03 |
| 21 | GO:0010287: plastoglobule | 2.90E-03 |
| 22 | GO:0009543: chloroplast thylakoid lumen | 3.06E-03 |
| 23 | GO:0009654: photosystem II oxygen evolving complex | 3.82E-03 |
| 24 | GO:0019898: extrinsic component of membrane | 6.31E-03 |
| 25 | GO:0009295: nucleoid | 7.88E-03 |
| 26 | GO:0031969: chloroplast membrane | 8.04E-03 |
| 27 | GO:0009707: chloroplast outer membrane | 1.03E-02 |
| 28 | GO:0031977: thylakoid lumen | 1.37E-02 |
| 29 | GO:0022626: cytosolic ribosome | 2.02E-02 |
| 30 | GO:0005747: mitochondrial respiratory chain complex I | 2.07E-02 |
| 31 | GO:0005777: peroxisome | 2.43E-02 |
| 32 | GO:0005623: cell | 2.76E-02 |
| 33 | GO:0005759: mitochondrial matrix | 3.19E-02 |
| 34 | GO:0005840: ribosome | 4.47E-02 |