co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G32250

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:2001253: regulation of histone H3-K36 trimethylation	0.00E+00
2	GO:0032264: IMP salvage	0.00E+00
3	GO:0070478: nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay	0.00E+00
4	GO:0010793: regulation of mRNA export from nucleus	0.00E+00
5	GO:0017126: nucleologenesis	0.00E+00
6	GO:0007160: cell-matrix adhesion	0.00E+00
7	GO:0032784: regulation of DNA-templated transcription, elongation	1.96E-07
8	GO:0002098: tRNA wobble uridine modification	9.35E-07
9	GO:0035265: organ growth	6.88E-06
10	GO:0010928: regulation of auxin mediated signaling pathway	6.88E-06
11	GO:0034620: cellular response to unfolded protein	2.64E-05
12	GO:0080178: 5-carbamoylmethyl uridine residue modification	2.64E-05
13	GO:0009168: purine ribonucleoside monophosphate biosynthetic process	2.64E-05
14	GO:0055047: generative cell mitosis	2.64E-05
15	GO:2000025: regulation of leaf formation	2.64E-05
16	GO:0007584: response to nutrient	6.72E-05
17	GO:0031538: negative regulation of anthocyanin metabolic process	6.72E-05
18	GO:0031204: posttranslational protein targeting to membrane, translocation	6.72E-05
19	GO:0051455: attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation	6.72E-05
20	GO:0060149: negative regulation of posttranscriptional gene silencing	6.72E-05
21	GO:0050684: regulation of mRNA processing	6.72E-05
22	GO:0051754: meiotic sister chromatid cohesion, centromeric	6.72E-05
23	GO:0090708: specification of plant organ axis polarity	1.18E-04
24	GO:0051601: exocyst localization	1.76E-04
25	GO:0048530: fruit morphogenesis	1.76E-04
26	GO:0043207: response to external biotic stimulus	1.76E-04
27	GO:0010107: potassium ion import	2.39E-04
28	GO:0033320: UDP-D-xylose biosynthetic process	2.39E-04
29	GO:0006751: glutathione catabolic process	3.78E-04
30	GO:0016070: RNA metabolic process	3.78E-04
31	GO:0042732: D-xylose metabolic process	3.78E-04
32	GO:0008283: cell proliferation	4.38E-04
33	GO:0009423: chorismate biosynthetic process	4.53E-04
34	GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	4.53E-04
35	GO:0006400: tRNA modification	5.30E-04
36	GO:0009846: pollen germination	5.47E-04
37	GO:0009787: regulation of abscisic acid-activated signaling pathway	6.10E-04
38	GO:0006491: N-glycan processing	6.10E-04
39	GO:0052543: callose deposition in cell wall	6.10E-04
40	GO:0010093: specification of floral organ identity	6.94E-04
41	GO:0009699: phenylpropanoid biosynthetic process	6.94E-04
42	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	6.94E-04
43	GO:0060321: acceptance of pollen	6.94E-04
44	GO:2000024: regulation of leaf development	7.80E-04
45	GO:0048589: developmental growth	7.80E-04
46	GO:0008202: steroid metabolic process	8.68E-04
47	GO:0009073: aromatic amino acid family biosynthetic process	1.05E-03
48	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	1.25E-03
49	GO:0034605: cellular response to heat	1.35E-03
50	GO:0009225: nucleotide-sugar metabolic process	1.45E-03
51	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.53E-03
52	GO:0051302: regulation of cell division	1.78E-03
53	GO:0080092: regulation of pollen tube growth	2.02E-03
54	GO:0071215: cellular response to abscisic acid stimulus	2.14E-03
55	GO:0009294: DNA mediated transformation	2.14E-03
56	GO:0070417: cellular response to cold	2.39E-03
57	GO:0008284: positive regulation of cell proliferation	2.39E-03
58	GO:0010118: stomatal movement	2.52E-03
59	GO:0008360: regulation of cell shape	2.65E-03
60	GO:0009556: microsporogenesis	2.91E-03
61	GO:0006886: intracellular protein transport	3.20E-03
62	GO:0006869: lipid transport	3.40E-03
63	GO:0006397: mRNA processing	3.98E-03
64	GO:0009816: defense response to bacterium, incompatible interaction	4.06E-03
65	GO:0008219: cell death	4.69E-03
66	GO:0006499: N-terminal protein myristoylation	5.02E-03
67	GO:0009734: auxin-activated signaling pathway	5.35E-03
68	GO:0007165: signal transduction	5.48E-03
69	GO:0009737: response to abscisic acid	5.64E-03
70	GO:0006887: exocytosis	6.21E-03
71	GO:0009793: embryo development ending in seed dormancy	6.26E-03
72	GO:0009738: abscisic acid-activated signaling pathway	6.52E-03
73	GO:0000209: protein polyubiquitination	6.75E-03
74	GO:0035556: intracellular signal transduction	7.11E-03
75	GO:0009965: leaf morphogenesis	7.12E-03
76	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	7.50E-03
77	GO:0009809: lignin biosynthetic process	8.08E-03
78	GO:0006486: protein glycosylation	8.08E-03
79	GO:0010224: response to UV-B	8.28E-03
80	GO:0006457: protein folding	8.72E-03
81	GO:0006096: glycolytic process	9.08E-03
82	GO:0018105: peptidyl-serine phosphorylation	1.06E-02
83	GO:0009742: brassinosteroid mediated signaling pathway	1.08E-02
84	GO:0009414: response to water deprivation	1.34E-02
85	GO:0009790: embryo development	1.35E-02
86	GO:0008380: RNA splicing	1.73E-02
87	GO:0009617: response to bacterium	1.73E-02
88	GO:0009860: pollen tube growth	2.19E-02
89	GO:0016192: vesicle-mediated transport	2.51E-02
90	GO:0046777: protein autophosphorylation	2.54E-02
91	GO:0006468: protein phosphorylation	2.88E-02
92	GO:0048364: root development	3.29E-02
93	GO:0008152: metabolic process	3.42E-02
94	GO:0009555: pollen development	4.80E-02
95	GO:0009611: response to wounding	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0003876: AMP deaminase activity	0.00E+00
2	GO:0017168: 5-oxoprolinase (ATP-hydrolyzing) activity	0.00E+00
3	GO:0046424: ferulate 5-hydroxylase activity	0.00E+00
4	GO:0008802: betaine-aldehyde dehydrogenase activity	2.64E-05
5	GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity	6.72E-05
6	GO:0030276: clathrin binding	1.09E-04
7	GO:0070181: small ribosomal subunit rRNA binding	1.18E-04
8	GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	1.76E-04
9	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	1.76E-04
10	GO:0016004: phospholipase activator activity	2.39E-04
11	GO:0004004: ATP-dependent RNA helicase activity	2.42E-04
12	GO:0005496: steroid binding	3.07E-04
13	GO:0004029: aldehyde dehydrogenase (NAD) activity	3.78E-04
14	GO:0048040: UDP-glucuronate decarboxylase activity	3.78E-04
15	GO:0004559: alpha-mannosidase activity	4.53E-04
16	GO:0070403: NAD+ binding	4.53E-04
17	GO:0035091: phosphatidylinositol binding	4.74E-04
18	GO:0005198: structural molecule activity	4.92E-04
19	GO:0008142: oxysterol binding	6.94E-04
20	GO:0003843: 1,3-beta-D-glucan synthase activity	6.94E-04
21	GO:0003724: RNA helicase activity	6.94E-04
22	GO:0005267: potassium channel activity	6.94E-04
23	GO:0016746: transferase activity, transferring acyl groups	8.43E-04
24	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	8.68E-04
25	GO:0031624: ubiquitin conjugating enzyme binding	1.35E-03
26	GO:0005515: protein binding	1.44E-03
27	GO:0005516: calmodulin binding	1.49E-03
28	GO:0051536: iron-sulfur cluster binding	1.67E-03
29	GO:0051087: chaperone binding	1.78E-03
30	GO:0043424: protein histidine kinase binding	1.78E-03
31	GO:0005524: ATP binding	1.94E-03
32	GO:0004402: histone acetyltransferase activity	2.52E-03
33	GO:0008536: Ran GTPase binding	2.65E-03
34	GO:0009931: calcium-dependent protein serine/threonine kinase activity	4.22E-03
35	GO:0004683: calmodulin-dependent protein kinase activity	4.37E-03
36	GO:0000149: SNARE binding	5.86E-03
37	GO:0015171: amino acid transmembrane transporter activity	8.68E-03
38	GO:0016874: ligase activity	9.92E-03
39	GO:0008026: ATP-dependent helicase activity	1.08E-02
40	GO:0005509: calcium ion binding	1.26E-02
41	GO:0008565: protein transporter activity	1.38E-02
42	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.80E-02
43	GO:0003682: chromatin binding	2.16E-02
44	GO:0004497: monooxygenase activity	2.42E-02
45	GO:0061630: ubiquitin protein ligase activity	2.51E-02
46	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.91E-02
47	GO:0008289: lipid binding	4.04E-02
48	GO:0016887: ATPase activity	4.36E-02
49	GO:0000166: nucleotide binding	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0055087: Ski complex	0.00E+00
2	GO:0008305: integrin complex	0.00E+00
3	GO:0033588: Elongator holoenzyme complex	4.78E-07
4	GO:0005783: endoplasmic reticulum	5.80E-06
5	GO:0005829: cytosol	5.33E-05
6	GO:0045254: pyruvate dehydrogenase complex	6.72E-05
7	GO:0005794: Golgi apparatus	1.23E-04
8	GO:0005719: nuclear euchromatin	1.76E-04
9	GO:0009506: plasmodesma	2.73E-04
10	GO:0030126: COPI vesicle coat	3.07E-04
11	GO:0031595: nuclear proteasome complex	5.30E-04
12	GO:0000148: 1,3-beta-D-glucan synthase complex	6.94E-04
13	GO:0008541: proteasome regulatory particle, lid subcomplex	1.05E-03
14	GO:0031307: integral component of mitochondrial outer membrane	1.15E-03
15	GO:0032040: small-subunit processome	1.15E-03
16	GO:0005886: plasma membrane	1.17E-03
17	GO:0030176: integral component of endoplasmic reticulum membrane	1.45E-03
18	GO:0005774: vacuolar membrane	2.14E-03
19	GO:0000139: Golgi membrane	3.18E-03
20	GO:0000145: exocyst	3.19E-03
21	GO:0005694: chromosome	3.19E-03
22	GO:0032580: Golgi cisterna membrane	3.47E-03
23	GO:0000151: ubiquitin ligase complex	4.69E-03
24	GO:0005856: cytoskeleton	7.12E-03
25	GO:0000502: proteasome complex	8.08E-03
26	GO:0005681: spliceosomal complex	9.08E-03
27	GO:0016607: nuclear speck	9.29E-03
28	GO:0005802: trans-Golgi network	1.08E-02
29	GO:0005654: nucleoplasm	1.19E-02
30	GO:0005768: endosome	1.23E-02
31	GO:0009524: phragmoplast	1.26E-02
32	GO:0005759: mitochondrial matrix	1.42E-02
33	GO:0016021: integral component of membrane	1.63E-02
34	GO:0043231: intracellular membrane-bounded organelle	3.42E-02