co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G32090

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1902171: regulation of tocopherol cyclase activity	0.00E+00
2	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
3	GO:0046677: response to antibiotic	0.00E+00
4	GO:0090279: regulation of calcium ion import	0.00E+00
5	GO:0048449: floral organ formation	0.00E+00
6	GO:1903508: positive regulation of nucleic acid-templated transcription	0.00E+00
7	GO:0071474: cellular hyperosmotic response	0.00E+00
8	GO:0070584: mitochondrion morphogenesis	0.00E+00
9	GO:1901401: regulation of tetrapyrrole metabolic process	0.00E+00
10	GO:0070979: protein K11-linked ubiquitination	0.00E+00
11	GO:0015970: guanosine tetraphosphate biosynthetic process	0.00E+00
12	GO:0090701: specification of plant organ identity	0.00E+00
13	GO:0015979: photosynthesis	4.40E-07
14	GO:0015995: chlorophyll biosynthetic process	5.34E-06
15	GO:0006824: cobalt ion transport	1.16E-04
16	GO:0018002: N-terminal peptidyl-glutamic acid acetylation	1.16E-04
17	GO:0006475: internal protein amino acid acetylation	1.16E-04
18	GO:0006474: N-terminal protein amino acid acetylation	1.16E-04
19	GO:0017198: N-terminal peptidyl-serine acetylation	1.16E-04
20	GO:0007623: circadian rhythm	1.77E-04
21	GO:0032527: protein exit from endoplasmic reticulum	2.69E-04
22	GO:0042548: regulation of photosynthesis, light reaction	2.69E-04
23	GO:0034755: iron ion transmembrane transport	2.69E-04
24	GO:0050992: dimethylallyl diphosphate biosynthetic process	2.69E-04
25	GO:0071712: ER-associated misfolded protein catabolic process	2.69E-04
26	GO:0051262: protein tetramerization	2.69E-04
27	GO:0010114: response to red light	2.96E-04
28	GO:0009768: photosynthesis, light harvesting in photosystem I	4.32E-04
29	GO:0032940: secretion by cell	4.45E-04
30	GO:0031145: anaphase-promoting complex-dependent catabolic process	4.45E-04
31	GO:0005977: glycogen metabolic process	4.45E-04
32	GO:0030071: regulation of mitotic metaphase/anaphase transition	6.38E-04
33	GO:0051639: actin filament network formation	6.38E-04
34	GO:0055114: oxidation-reduction process	8.37E-04
35	GO:0009765: photosynthesis, light harvesting	8.47E-04
36	GO:2000306: positive regulation of photomorphogenesis	8.47E-04
37	GO:0042938: dipeptide transport	8.47E-04
38	GO:0010021: amylopectin biosynthetic process	8.47E-04
39	GO:0051764: actin crosslink formation	8.47E-04
40	GO:0032876: negative regulation of DNA endoreduplication	1.07E-03
41	GO:0016123: xanthophyll biosynthetic process	1.07E-03
42	GO:0045962: positive regulation of development, heterochronic	1.31E-03
43	GO:0000060: protein import into nucleus, translocation	1.31E-03
44	GO:0006655: phosphatidylglycerol biosynthetic process	1.31E-03
45	GO:0009643: photosynthetic acclimation	1.31E-03
46	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	1.31E-03
47	GO:0010189: vitamin E biosynthetic process	1.56E-03
48	GO:0010077: maintenance of inflorescence meristem identity	1.56E-03
49	GO:0071470: cellular response to osmotic stress	1.56E-03
50	GO:0080186: developmental vegetative growth	1.84E-03
51	GO:0009769: photosynthesis, light harvesting in photosystem II	1.84E-03
52	GO:0009645: response to low light intensity stimulus	1.84E-03
53	GO:0009642: response to light intensity	2.13E-03
54	GO:0032875: regulation of DNA endoreduplication	2.13E-03
55	GO:0050821: protein stabilization	2.13E-03
56	GO:0009637: response to blue light	2.18E-03
57	GO:0034599: cellular response to oxidative stress	2.28E-03
58	GO:0007186: G-protein coupled receptor signaling pathway	2.43E-03
59	GO:0009657: plastid organization	2.43E-03
60	GO:0048507: meristem development	2.74E-03
61	GO:0010206: photosystem II repair	2.74E-03
62	GO:0009640: photomorphogenesis	2.80E-03
63	GO:0009723: response to ethylene	2.80E-03
64	GO:0042761: very long-chain fatty acid biosynthetic process	3.07E-03
65	GO:0006535: cysteine biosynthetic process from serine	3.41E-03
66	GO:0009688: abscisic acid biosynthetic process	3.41E-03
67	GO:0010629: negative regulation of gene expression	3.41E-03
68	GO:0009698: phenylpropanoid metabolic process	3.76E-03
69	GO:0043085: positive regulation of catalytic activity	3.76E-03
70	GO:0030148: sphingolipid biosynthetic process	3.76E-03
71	GO:0016024: CDP-diacylglycerol biosynthetic process	4.13E-03
72	GO:0015706: nitrate transport	4.13E-03
73	GO:0018107: peptidyl-threonine phosphorylation	4.50E-03
74	GO:0009767: photosynthetic electron transport chain	4.50E-03
75	GO:0006629: lipid metabolic process	4.99E-03
76	GO:0006636: unsaturated fatty acid biosynthetic process	5.70E-03
77	GO:0051017: actin filament bundle assembly	6.12E-03
78	GO:0006289: nucleotide-excision repair	6.12E-03
79	GO:0019344: cysteine biosynthetic process	6.12E-03
80	GO:0006874: cellular calcium ion homeostasis	6.56E-03
81	GO:0009269: response to desiccation	7.00E-03
82	GO:0070417: cellular response to cold	8.88E-03
83	GO:0010087: phloem or xylem histogenesis	9.38E-03
84	GO:0010305: leaf vascular tissue pattern formation	9.89E-03
85	GO:0006662: glycerol ether metabolic process	9.89E-03
86	GO:0010182: sugar mediated signaling pathway	9.89E-03
87	GO:0007018: microtubule-based movement	1.04E-02
88	GO:0009416: response to light stimulus	1.04E-02
89	GO:0006508: proteolysis	1.07E-02
90	GO:0019252: starch biosynthetic process	1.09E-02
91	GO:0008654: phospholipid biosynthetic process	1.09E-02
92	GO:0010193: response to ozone	1.15E-02
93	GO:0009911: positive regulation of flower development	1.49E-02
94	GO:0006970: response to osmotic stress	1.54E-02
95	GO:0016311: dephosphorylation	1.73E-02
96	GO:0018298: protein-chromophore linkage	1.80E-02
97	GO:0046777: protein autophosphorylation	1.90E-02
98	GO:0006811: ion transport	1.92E-02
99	GO:0010218: response to far red light	1.92E-02
100	GO:0044550: secondary metabolite biosynthetic process	1.93E-02
101	GO:0007568: aging	1.99E-02
102	GO:0009910: negative regulation of flower development	1.99E-02
103	GO:0006865: amino acid transport	2.06E-02
104	GO:0045454: cell redox homeostasis	2.13E-02
105	GO:0006631: fatty acid metabolic process	2.40E-02
106	GO:0008283: cell proliferation	2.54E-02
107	GO:0051707: response to other organism	2.54E-02
108	GO:0009644: response to high light intensity	2.69E-02
109	GO:0009965: leaf morphogenesis	2.76E-02
110	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.91E-02
111	GO:0000165: MAPK cascade	2.91E-02
112	GO:0006812: cation transport	2.99E-02
113	GO:0010224: response to UV-B	3.22E-02
114	GO:0006857: oligopeptide transport	3.30E-02
115	GO:0006417: regulation of translation	3.38E-02
116	GO:0009909: regulation of flower development	3.38E-02
117	GO:0043086: negative regulation of catalytic activity	3.54E-02
118	GO:0018105: peptidyl-serine phosphorylation	4.13E-02
119	GO:0006396: RNA processing	4.13E-02
120	GO:0009908: flower development	4.19E-02
121	GO:0005975: carbohydrate metabolic process	4.23E-02

Rank	GO Term	Adjusted P value
1	GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity	0.00E+00
2	GO:0045550: geranylgeranyl reductase activity	0.00E+00
3	GO:0051745: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity	0.00E+00
4	GO:0015038: glutathione disulfide oxidoreductase activity	0.00E+00
5	GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity	0.00E+00
6	GO:0009540: zeaxanthin epoxidase [overall] activity	0.00E+00
7	GO:1990189: peptide-serine-N-acetyltransferase activity	1.16E-04
8	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	1.16E-04
9	GO:1990190: peptide-glutamate-N-acetyltransferase activity	1.16E-04
10	GO:0052631: sphingolipid delta-8 desaturase activity	1.16E-04
11	GO:0046429: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity	1.16E-04
12	GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor	1.16E-04
13	GO:0005227: calcium activated cation channel activity	1.16E-04
14	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	2.69E-04
15	GO:0016630: protochlorophyllide reductase activity	2.69E-04
16	GO:0019172: glyoxalase III activity	2.69E-04
17	GO:0019156: isoamylase activity	2.69E-04
18	GO:0008728: GTP diphosphokinase activity	2.69E-04
19	GO:0050017: L-3-cyanoalanine synthase activity	2.69E-04
20	GO:0044390: ubiquitin-like protein conjugating enzyme binding	2.69E-04
21	GO:0016868: intramolecular transferase activity, phosphotransferases	2.69E-04
22	GO:0010277: chlorophyllide a oxygenase [overall] activity	4.45E-04
23	GO:0016805: dipeptidase activity	4.45E-04
24	GO:0004180: carboxypeptidase activity	4.45E-04
25	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	6.38E-04
26	GO:0004930: G-protein coupled receptor activity	8.47E-04
27	GO:0070628: proteasome binding	8.47E-04
28	GO:0009011: starch synthase activity	8.47E-04
29	GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway	8.47E-04
30	GO:0042936: dipeptide transporter activity	8.47E-04
31	GO:0051538: 3 iron, 4 sulfur cluster binding	1.07E-03
32	GO:0031593: polyubiquitin binding	1.31E-03
33	GO:0004556: alpha-amylase activity	1.31E-03
34	GO:0004462: lactoylglutathione lyase activity	1.31E-03
35	GO:0004605: phosphatidate cytidylyltransferase activity	1.31E-03
36	GO:0005261: cation channel activity	1.56E-03
37	GO:0004602: glutathione peroxidase activity	1.56E-03
38	GO:0004124: cysteine synthase activity	1.56E-03
39	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	2.43E-03
40	GO:0071949: FAD binding	2.74E-03
41	GO:0051537: 2 iron, 2 sulfur cluster binding	3.03E-03
42	GO:0005381: iron ion transmembrane transporter activity	3.07E-03
43	GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity	3.41E-03
44	GO:0008047: enzyme activator activity	3.41E-03
45	GO:0008081: phosphoric diester hydrolase activity	4.50E-03
46	GO:0004022: alcohol dehydrogenase (NAD) activity	4.50E-03
47	GO:0005217: intracellular ligand-gated ion channel activity	5.29E-03
48	GO:0004970: ionotropic glutamate receptor activity	5.29E-03
49	GO:0004190: aspartic-type endopeptidase activity	5.29E-03
50	GO:0015035: protein disulfide oxidoreductase activity	5.49E-03
51	GO:0031409: pigment binding	5.70E-03
52	GO:0008134: transcription factor binding	6.12E-03
53	GO:0043130: ubiquitin binding	6.12E-03
54	GO:0005216: ion channel activity	6.56E-03
55	GO:0004176: ATP-dependent peptidase activity	7.00E-03
56	GO:0008289: lipid binding	7.60E-03
57	GO:0003727: single-stranded RNA binding	8.40E-03
58	GO:0047134: protein-disulfide reductase activity	8.88E-03
59	GO:0008080: N-acetyltransferase activity	9.89E-03
60	GO:0008536: Ran GTPase binding	9.89E-03
61	GO:0004791: thioredoxin-disulfide reductase activity	1.04E-02
62	GO:0019901: protein kinase binding	1.09E-02
63	GO:0004672: protein kinase activity	1.13E-02
64	GO:0048038: quinone binding	1.15E-02
65	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.26E-02
66	GO:0051015: actin filament binding	1.26E-02
67	GO:0003684: damaged DNA binding	1.31E-02
68	GO:0016168: chlorophyll binding	1.55E-02
69	GO:0008233: peptidase activity	1.75E-02
70	GO:0016787: hydrolase activity	1.99E-02
71	GO:0003993: acid phosphatase activity	2.19E-02
72	GO:0004674: protein serine/threonine kinase activity	2.40E-02
73	GO:0004185: serine-type carboxypeptidase activity	2.54E-02
74	GO:0043621: protein self-association	2.69E-02
75	GO:0005215: transporter activity	2.86E-02
76	GO:0016298: lipase activity	3.22E-02
77	GO:0003777: microtubule motor activity	3.38E-02
78	GO:0015171: amino acid transmembrane transporter activity	3.38E-02
79	GO:0016491: oxidoreductase activity	3.55E-02
80	GO:0046872: metal ion binding	3.86E-02
81	GO:0016874: ligase activity	3.87E-02
82	GO:0003779: actin binding	3.96E-02
83	GO:0016746: transferase activity, transferring acyl groups	4.13E-02
84	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.83E-02

Rank	GO Term	Adjusted P value
1	GO:0005943: phosphatidylinositol 3-kinase complex, class IA	0.00E+00
2	GO:0010368: chloroplast isoamylase complex	0.00E+00
3	GO:0009507: chloroplast	1.31E-10
4	GO:0009535: chloroplast thylakoid membrane	1.57E-10
5	GO:0009534: chloroplast thylakoid	4.91E-09
6	GO:0009941: chloroplast envelope	1.49E-07
7	GO:0009570: chloroplast stroma	9.47E-07
8	GO:0009538: photosystem I reaction center	7.12E-05
9	GO:0031415: NatA complex	2.69E-04
10	GO:0042651: thylakoid membrane	4.32E-04
11	GO:0009579: thylakoid	6.04E-04
12	GO:0032432: actin filament bundle	6.38E-04
13	GO:0036513: Derlin-1 retrotranslocation complex	6.38E-04
14	GO:0009522: photosystem I	8.22E-04
15	GO:0010287: plastoglobule	8.44E-04
16	GO:0009517: PSII associated light-harvesting complex II	8.47E-04
17	GO:0030660: Golgi-associated vesicle membrane	8.47E-04
18	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	8.47E-04
19	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	2.13E-03
20	GO:0005680: anaphase-promoting complex	2.74E-03
21	GO:0031969: chloroplast membrane	3.05E-03
22	GO:0016604: nuclear body	3.07E-03
23	GO:0005765: lysosomal membrane	3.76E-03
24	GO:0005884: actin filament	3.76E-03
25	GO:0030095: chloroplast photosystem II	4.89E-03
26	GO:0030076: light-harvesting complex	5.29E-03
27	GO:0009706: chloroplast inner membrane	5.34E-03
28	GO:0009543: chloroplast thylakoid lumen	6.67E-03
29	GO:0005871: kinesin complex	8.88E-03
30	GO:0009523: photosystem II	1.09E-02
31	GO:0005789: endoplasmic reticulum membrane	1.20E-02
32	GO:0009707: chloroplast outer membrane	1.80E-02
33	GO:0016021: integral component of membrane	1.83E-02
34	GO:0031977: thylakoid lumen	2.40E-02
35	GO:0010008: endosome membrane	3.63E-02
36	GO:0005783: endoplasmic reticulum	4.28E-02
37	GO:0005623: cell	4.83E-02