Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G31230

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0000390: spliceosomal complex disassembly0.00E+00
2GO:0060213: positive regulation of nuclear-transcribed mRNA poly(A) tail shortening0.00E+00
3GO:0000291: nuclear-transcribed mRNA catabolic process, exonucleolytic1.87E-05
4GO:0009768: photosynthesis, light harvesting in photosystem I3.37E-05
5GO:0045948: positive regulation of translational initiation4.85E-05
6GO:0048209: regulation of vesicle targeting, to, from or within Golgi4.85E-05
7GO:0001736: establishment of planar polarity4.85E-05
8GO:0032509: endosome transport via multivesicular body sorting pathway4.85E-05
9GO:0032012: regulation of ARF protein signal transduction8.61E-05
10GO:0016255: attachment of GPI anchor to protein8.61E-05
11GO:0042256: mature ribosome assembly8.61E-05
12GO:0080167: response to karrikin1.47E-04
13GO:0018298: protein-chromophore linkage1.72E-04
14GO:0015743: malate transport1.78E-04
15GO:0009942: longitudinal axis specification3.42E-04
16GO:0000911: cytokinesis by cell plate formation3.42E-04
17GO:0009769: photosynthesis, light harvesting in photosystem II4.02E-04
18GO:0009645: response to low light intensity stimulus4.02E-04
19GO:0007155: cell adhesion4.64E-04
20GO:0006367: transcription initiation from RNA polymerase II promoter5.27E-04
21GO:0009880: embryonic pattern specification5.27E-04
22GO:0009970: cellular response to sulfate starvation7.30E-04
23GO:0006995: cellular response to nitrogen starvation7.30E-04
24GO:0048765: root hair cell differentiation8.02E-04
25GO:2000012: regulation of auxin polar transport9.49E-04
26GO:0010540: basipetal auxin transport1.02E-03
27GO:0045492: xylan biosynthetic process1.70E-03
28GO:0016192: vesicle-mediated transport1.80E-03
29GO:0010087: phloem or xylem histogenesis1.89E-03
30GO:0015979: photosynthesis1.95E-03
31GO:0042752: regulation of circadian rhythm2.09E-03
32GO:0006914: autophagy2.61E-03
33GO:0009788: negative regulation of abscisic acid-activated signaling pathway3.05E-03
34GO:0006950: response to stress3.28E-03
35GO:0016049: cell growth3.40E-03
36GO:0048481: plant ovule development3.51E-03
37GO:0010311: lateral root formation3.63E-03
38GO:0016051: carbohydrate biosynthetic process4.13E-03
39GO:0009416: response to light stimulus4.40E-03
40GO:0006839: mitochondrial transport4.51E-03
41GO:0006897: endocytosis4.64E-03
42GO:0042542: response to hydrogen peroxide4.77E-03
43GO:0009644: response to high light intensity5.18E-03
44GO:0000398: mRNA splicing, via spliceosome8.50E-03
45GO:0042744: hydrogen peroxide catabolic process9.85E-03
46GO:0006633: fatty acid biosynthetic process1.06E-02
47GO:0016036: cellular response to phosphate starvation1.07E-02
48GO:0015031: protein transport1.13E-02
49GO:0009409: response to cold1.21E-02
50GO:0009826: unidimensional cell growth1.50E-02
51GO:0007165: signal transduction1.86E-02
52GO:0009793: embryo development ending in seed dormancy2.07E-02
53GO:0006886: intracellular protein transport2.08E-02
54GO:0032259: methylation2.29E-02
55GO:0009908: flower development3.31E-02
56GO:0009738: abscisic acid-activated signaling pathway3.47E-02
57GO:0045893: positive regulation of transcription, DNA-templated3.92E-02
58GO:0055085: transmembrane transport4.21E-02
59GO:0006355: regulation of transcription, DNA-templated4.88E-02
RankGO TermAdjusted P value
1GO:0010292: GTP:GDP antiporter activity0.00E+00
2GO:1990446: U1 snRNP binding0.00E+00
3GO:0031409: pigment binding2.63E-05
4GO:0003923: GPI-anchor transamidase activity4.85E-05
5GO:0004096: catalase activity8.61E-05
6GO:0016168: chlorophyll binding1.37E-04
7GO:0005253: anion channel activity1.78E-04
8GO:0005086: ARF guanyl-nucleotide exchange factor activity1.78E-04
9GO:0045300: acyl-[acyl-carrier-protein] desaturase activity2.30E-04
10GO:0031369: translation initiation factor binding2.85E-04
11GO:0015140: malate transmembrane transporter activity4.02E-04
12GO:0015020: glucuronosyltransferase activity7.30E-04
13GO:0003727: single-stranded RNA binding1.70E-03
14GO:0008375: acetylglucosaminyltransferase activity3.16E-03
15GO:0005515: protein binding3.71E-03
16GO:0050897: cobalt ion binding3.88E-03
17GO:0003697: single-stranded DNA binding4.13E-03
18GO:0003899: DNA-directed 5'-3' RNA polymerase activity6.02E-03
19GO:0042802: identical protein binding1.34E-02
20GO:0008168: methyltransferase activity1.50E-02
21GO:0046982: protein heterodimerization activity1.52E-02
22GO:0042803: protein homodimerization activity2.10E-02
23GO:0004722: protein serine/threonine phosphatase activity2.17E-02
24GO:0003677: DNA binding3.08E-02
25GO:0003676: nucleic acid binding3.68E-02
26GO:0046872: metal ion binding3.83E-02
27GO:0016301: kinase activity4.39E-02
RankGO TermAdjusted P value
1GO:0031981: nuclear lumen0.00E+00
2GO:0071008: U2-type post-mRNA release spliceosomal complex0.00E+00
3GO:0030076: light-harvesting complex2.30E-05
4GO:0009522: photosystem I7.33E-05
5GO:0042765: GPI-anchor transamidase complex8.61E-05
6GO:0005776: autophagosome1.78E-04
7GO:0010287: plastoglobule6.42E-04
8GO:0005665: DNA-directed RNA polymerase II, core complex8.75E-04
9GO:0042651: thylakoid membrane1.35E-03
10GO:0031410: cytoplasmic vesicle1.52E-03
11GO:0009523: photosystem II2.19E-03
12GO:0000932: P-body2.94E-03
13GO:0000786: nucleosome4.00E-03
14GO:0005777: peroxisome5.05E-03
15GO:0009579: thylakoid5.26E-03
16GO:0009534: chloroplast thylakoid5.31E-03
17GO:0010008: endosome membrane6.91E-03
18GO:0005802: trans-Golgi network7.03E-03
19GO:0005768: endosome8.00E-03
20GO:0009941: chloroplast envelope8.87E-03
21GO:0009705: plant-type vacuole membrane1.13E-02
22GO:0000139: Golgi membrane1.21E-02
23GO:0046658: anchored component of plasma membrane1.37E-02
24GO:0009535: chloroplast thylakoid membrane2.00E-02
25GO:0005743: mitochondrial inner membrane2.24E-02
26GO:0016020: membrane2.28E-02
27GO:0009506: plasmodesma3.28E-02
28GO:0022626: cytosolic ribosome3.44E-02
29GO:0005618: cell wall3.54E-02
30GO:0031225: anchored component of membrane4.88E-02
Gene type



Gene DE type