GO Enrichment Analysis of Co-expressed Genes with
AT2G31170
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
2 | GO:0006573: valine metabolic process | 0.00E+00 |
3 | GO:0006437: tyrosyl-tRNA aminoacylation | 0.00E+00 |
4 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
5 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
6 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
7 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
8 | GO:0009658: chloroplast organization | 6.50E-10 |
9 | GO:0042026: protein refolding | 9.33E-09 |
10 | GO:0032544: plastid translation | 5.64E-08 |
11 | GO:0006458: 'de novo' protein folding | 1.59E-06 |
12 | GO:0006418: tRNA aminoacylation for protein translation | 2.07E-06 |
13 | GO:0061077: chaperone-mediated protein folding | 2.57E-06 |
14 | GO:0006457: protein folding | 5.82E-06 |
15 | GO:0043572: plastid fission | 2.00E-05 |
16 | GO:0010020: chloroplast fission | 3.55E-05 |
17 | GO:0006412: translation | 4.15E-05 |
18 | GO:0007005: mitochondrion organization | 9.34E-05 |
19 | GO:0006810: transport | 1.13E-04 |
20 | GO:0016117: carotenoid biosynthetic process | 1.36E-04 |
21 | GO:0042742: defense response to bacterium | 1.62E-04 |
22 | GO:0006438: valyl-tRNA aminoacylation | 2.27E-04 |
23 | GO:0010442: guard cell morphogenesis | 2.27E-04 |
24 | GO:0006551: leucine metabolic process | 2.27E-04 |
25 | GO:0006430: lysyl-tRNA aminoacylation | 2.27E-04 |
26 | GO:0006415: translational termination | 4.83E-04 |
27 | GO:0009773: photosynthetic electron transport in photosystem I | 4.83E-04 |
28 | GO:0009662: etioplast organization | 5.05E-04 |
29 | GO:2000123: positive regulation of stomatal complex development | 5.05E-04 |
30 | GO:0010424: DNA methylation on cytosine within a CG sequence | 5.05E-04 |
31 | GO:0043039: tRNA aminoacylation | 5.05E-04 |
32 | GO:0052541: plant-type cell wall cellulose metabolic process | 5.05E-04 |
33 | GO:0006695: cholesterol biosynthetic process | 5.05E-04 |
34 | GO:0010086: embryonic root morphogenesis | 5.05E-04 |
35 | GO:0010069: zygote asymmetric cytokinesis in embryo sac | 5.05E-04 |
36 | GO:0045454: cell redox homeostasis | 5.91E-04 |
37 | GO:0009790: embryo development | 6.15E-04 |
38 | GO:0009767: photosynthetic electron transport chain | 6.27E-04 |
39 | GO:0010207: photosystem II assembly | 7.06E-04 |
40 | GO:0006696: ergosterol biosynthetic process | 8.21E-04 |
41 | GO:0007017: microtubule-based process | 1.06E-03 |
42 | GO:0071329: cellular response to sucrose stimulus | 1.17E-03 |
43 | GO:0006165: nucleoside diphosphate phosphorylation | 1.17E-03 |
44 | GO:0006228: UTP biosynthetic process | 1.17E-03 |
45 | GO:0006424: glutamyl-tRNA aminoacylation | 1.17E-03 |
46 | GO:0016556: mRNA modification | 1.17E-03 |
47 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.17E-03 |
48 | GO:0007231: osmosensory signaling pathway | 1.17E-03 |
49 | GO:0051085: chaperone mediated protein folding requiring cofactor | 1.17E-03 |
50 | GO:0010239: chloroplast mRNA processing | 1.17E-03 |
51 | GO:0006241: CTP biosynthetic process | 1.17E-03 |
52 | GO:0006730: one-carbon metabolic process | 1.27E-03 |
53 | GO:0033500: carbohydrate homeostasis | 1.56E-03 |
54 | GO:2000038: regulation of stomatal complex development | 1.56E-03 |
55 | GO:0006546: glycine catabolic process | 1.56E-03 |
56 | GO:0009902: chloroplast relocation | 1.56E-03 |
57 | GO:0006808: regulation of nitrogen utilization | 1.56E-03 |
58 | GO:0006479: protein methylation | 1.56E-03 |
59 | GO:0009765: photosynthesis, light harvesting | 1.56E-03 |
60 | GO:0006183: GTP biosynthetic process | 1.56E-03 |
61 | GO:0042254: ribosome biogenesis | 1.57E-03 |
62 | GO:0000413: protein peptidyl-prolyl isomerization | 1.76E-03 |
63 | GO:0048359: mucilage metabolic process involved in seed coat development | 1.99E-03 |
64 | GO:0016120: carotene biosynthetic process | 1.99E-03 |
65 | GO:0032543: mitochondrial translation | 1.99E-03 |
66 | GO:0010236: plastoquinone biosynthetic process | 1.99E-03 |
67 | GO:0016123: xanthophyll biosynthetic process | 1.99E-03 |
68 | GO:0009735: response to cytokinin | 1.99E-03 |
69 | GO:0010375: stomatal complex patterning | 1.99E-03 |
70 | GO:0006796: phosphate-containing compound metabolic process | 2.45E-03 |
71 | GO:0042793: transcription from plastid promoter | 2.45E-03 |
72 | GO:0048831: regulation of shoot system development | 2.45E-03 |
73 | GO:0010190: cytochrome b6f complex assembly | 2.45E-03 |
74 | GO:0042549: photosystem II stabilization | 2.45E-03 |
75 | GO:0006555: methionine metabolic process | 2.45E-03 |
76 | GO:0009082: branched-chain amino acid biosynthetic process | 2.94E-03 |
77 | GO:1901259: chloroplast rRNA processing | 2.94E-03 |
78 | GO:0048509: regulation of meristem development | 2.94E-03 |
79 | GO:0009099: valine biosynthetic process | 2.94E-03 |
80 | GO:0009854: oxidative photosynthetic carbon pathway | 2.94E-03 |
81 | GO:0010555: response to mannitol | 2.94E-03 |
82 | GO:0009955: adaxial/abaxial pattern specification | 2.94E-03 |
83 | GO:0010027: thylakoid membrane organization | 3.36E-03 |
84 | GO:0008272: sulfate transport | 3.47E-03 |
85 | GO:0000105: histidine biosynthetic process | 4.02E-03 |
86 | GO:0008610: lipid biosynthetic process | 4.02E-03 |
87 | GO:0009642: response to light intensity | 4.02E-03 |
88 | GO:0009793: embryo development ending in seed dormancy | 4.08E-03 |
89 | GO:0048481: plant ovule development | 4.38E-03 |
90 | GO:0009817: defense response to fungus, incompatible interaction | 4.38E-03 |
91 | GO:0009657: plastid organization | 4.60E-03 |
92 | GO:0009097: isoleucine biosynthetic process | 4.60E-03 |
93 | GO:0006075: (1->3)-beta-D-glucan biosynthetic process | 4.60E-03 |
94 | GO:0010206: photosystem II repair | 5.22E-03 |
95 | GO:0033384: geranyl diphosphate biosynthetic process | 5.22E-03 |
96 | GO:0006783: heme biosynthetic process | 5.22E-03 |
97 | GO:0048589: developmental growth | 5.22E-03 |
98 | GO:0015780: nucleotide-sugar transport | 5.22E-03 |
99 | GO:0045337: farnesyl diphosphate biosynthetic process | 5.22E-03 |
100 | GO:0009853: photorespiration | 5.54E-03 |
101 | GO:0046686: response to cadmium ion | 5.55E-03 |
102 | GO:0006349: regulation of gene expression by genetic imprinting | 5.85E-03 |
103 | GO:0006779: porphyrin-containing compound biosynthetic process | 5.85E-03 |
104 | GO:0035999: tetrahydrofolate interconversion | 5.85E-03 |
105 | GO:0006782: protoporphyrinogen IX biosynthetic process | 6.51E-03 |
106 | GO:0045036: protein targeting to chloroplast | 6.51E-03 |
107 | GO:0019684: photosynthesis, light reaction | 7.20E-03 |
108 | GO:0043085: positive regulation of catalytic activity | 7.20E-03 |
109 | GO:0018119: peptidyl-cysteine S-nitrosylation | 7.20E-03 |
110 | GO:0010216: maintenance of DNA methylation | 7.20E-03 |
111 | GO:0045037: protein import into chloroplast stroma | 7.92E-03 |
112 | GO:0090351: seedling development | 1.02E-02 |
113 | GO:0006071: glycerol metabolic process | 1.10E-02 |
114 | GO:0007010: cytoskeleton organization | 1.19E-02 |
115 | GO:0019344: cysteine biosynthetic process | 1.19E-02 |
116 | GO:0009116: nucleoside metabolic process | 1.19E-02 |
117 | GO:0015979: photosynthesis | 1.20E-02 |
118 | GO:0010026: trichome differentiation | 1.27E-02 |
119 | GO:0009409: response to cold | 1.35E-02 |
120 | GO:0080092: regulation of pollen tube growth | 1.45E-02 |
121 | GO:0009294: DNA mediated transformation | 1.54E-02 |
122 | GO:0009411: response to UV | 1.54E-02 |
123 | GO:0008360: regulation of cell shape | 1.93E-02 |
124 | GO:0006662: glycerol ether metabolic process | 1.93E-02 |
125 | GO:0007018: microtubule-based movement | 2.03E-02 |
126 | GO:0006814: sodium ion transport | 2.03E-02 |
127 | GO:0006633: fatty acid biosynthetic process | 2.17E-02 |
128 | GO:0006413: translational initiation | 2.22E-02 |
129 | GO:0016032: viral process | 2.35E-02 |
130 | GO:0007267: cell-cell signaling | 2.68E-02 |
131 | GO:0010029: regulation of seed germination | 3.03E-02 |
132 | GO:0009627: systemic acquired resistance | 3.15E-02 |
133 | GO:0015995: chlorophyll biosynthetic process | 3.27E-02 |
134 | GO:0016311: dephosphorylation | 3.40E-02 |
135 | GO:0018298: protein-chromophore linkage | 3.52E-02 |
136 | GO:0008219: cell death | 3.52E-02 |
137 | GO:0048767: root hair elongation | 3.65E-02 |
138 | GO:0000160: phosphorelay signal transduction system | 3.65E-02 |
139 | GO:0009910: negative regulation of flower development | 3.90E-02 |
140 | GO:0009637: response to blue light | 4.17E-02 |
141 | GO:0034599: cellular response to oxidative stress | 4.30E-02 |
142 | GO:0006839: mitochondrial transport | 4.57E-02 |
143 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 4.71E-02 |
144 | GO:0006631: fatty acid metabolic process | 4.71E-02 |
145 | GO:0042542: response to hydrogen peroxide | 4.85E-02 |
146 | GO:0051707: response to other organism | 4.98E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
2 | GO:0008887: glycerate kinase activity | 0.00E+00 |
3 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
4 | GO:0008962: phosphatidylglycerophosphatase activity | 0.00E+00 |
5 | GO:0046905: phytoene synthase activity | 0.00E+00 |
6 | GO:0004636: phosphoribosyl-ATP diphosphatase activity | 0.00E+00 |
7 | GO:0009885: transmembrane histidine kinase cytokinin receptor activity | 0.00E+00 |
8 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
9 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
10 | GO:0019955: cytokine binding | 0.00E+00 |
11 | GO:0004635: phosphoribosyl-AMP cyclohydrolase activity | 0.00E+00 |
12 | GO:0051920: peroxiredoxin activity | 9.33E-09 |
13 | GO:0016209: antioxidant activity | 3.33E-08 |
14 | GO:0051082: unfolded protein binding | 1.10E-07 |
15 | GO:0019843: rRNA binding | 2.47E-07 |
16 | GO:0044183: protein binding involved in protein folding | 2.96E-07 |
17 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 5.03E-07 |
18 | GO:0003735: structural constituent of ribosome | 2.15E-06 |
19 | GO:0004812: aminoacyl-tRNA ligase activity | 5.57E-06 |
20 | GO:0016149: translation release factor activity, codon specific | 2.00E-05 |
21 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.19E-04 |
22 | GO:0004655: porphobilinogen synthase activity | 2.27E-04 |
23 | GO:0051996: squalene synthase activity | 2.27E-04 |
24 | GO:0003984: acetolactate synthase activity | 2.27E-04 |
25 | GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity | 2.27E-04 |
26 | GO:0004832: valine-tRNA ligase activity | 2.27E-04 |
27 | GO:0004824: lysine-tRNA ligase activity | 2.27E-04 |
28 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 2.27E-04 |
29 | GO:0004831: tyrosine-tRNA ligase activity | 2.27E-04 |
30 | GO:0003747: translation release factor activity | 3.00E-04 |
31 | GO:0009884: cytokinin receptor activity | 5.05E-04 |
32 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 5.05E-04 |
33 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 5.05E-04 |
34 | GO:0004047: aminomethyltransferase activity | 5.05E-04 |
35 | GO:0031072: heat shock protein binding | 6.27E-04 |
36 | GO:0002161: aminoacyl-tRNA editing activity | 8.21E-04 |
37 | GO:0004148: dihydrolipoyl dehydrogenase activity | 8.21E-04 |
38 | GO:0030267: glyoxylate reductase (NADP) activity | 8.21E-04 |
39 | GO:0005034: osmosensor activity | 8.21E-04 |
40 | GO:0017150: tRNA dihydrouridine synthase activity | 8.21E-04 |
41 | GO:0003913: DNA photolyase activity | 8.21E-04 |
42 | GO:0005528: FK506 binding | 9.67E-04 |
43 | GO:0005198: structural molecule activity | 1.13E-03 |
44 | GO:0004550: nucleoside diphosphate kinase activity | 1.17E-03 |
45 | GO:0043023: ribosomal large subunit binding | 1.17E-03 |
46 | GO:0008097: 5S rRNA binding | 1.17E-03 |
47 | GO:0008508: bile acid:sodium symporter activity | 1.17E-03 |
48 | GO:0008276: protein methyltransferase activity | 1.17E-03 |
49 | GO:0004601: peroxidase activity | 1.53E-03 |
50 | GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity | 1.56E-03 |
51 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.56E-03 |
52 | GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed | 1.56E-03 |
53 | GO:0004045: aminoacyl-tRNA hydrolase activity | 1.56E-03 |
54 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.99E-03 |
55 | GO:0008374: O-acyltransferase activity | 1.99E-03 |
56 | GO:0019901: protein kinase binding | 2.18E-03 |
57 | GO:0016462: pyrophosphatase activity | 2.45E-03 |
58 | GO:0080030: methyl indole-3-acetate esterase activity | 2.45E-03 |
59 | GO:0102391: decanoate--CoA ligase activity | 2.94E-03 |
60 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 2.94E-03 |
61 | GO:0003886: DNA (cytosine-5-)-methyltransferase activity | 2.94E-03 |
62 | GO:0008237: metallopeptidase activity | 2.99E-03 |
63 | GO:0005200: structural constituent of cytoskeleton | 2.99E-03 |
64 | GO:0019899: enzyme binding | 3.47E-03 |
65 | GO:0004467: long-chain fatty acid-CoA ligase activity | 3.47E-03 |
66 | GO:0016831: carboxy-lyase activity | 3.47E-03 |
67 | GO:0004427: inorganic diphosphatase activity | 3.47E-03 |
68 | GO:0009881: photoreceptor activity | 3.47E-03 |
69 | GO:0003924: GTPase activity | 3.83E-03 |
70 | GO:0004033: aldo-keto reductase (NADP) activity | 4.02E-03 |
71 | GO:0008236: serine-type peptidase activity | 4.16E-03 |
72 | GO:0003843: 1,3-beta-D-glucan synthase activity | 4.60E-03 |
73 | GO:0004222: metalloendopeptidase activity | 4.82E-03 |
74 | GO:0004337: geranyltranstransferase activity | 5.22E-03 |
75 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 5.22E-03 |
76 | GO:0003746: translation elongation factor activity | 5.54E-03 |
77 | GO:0004673: protein histidine kinase activity | 6.51E-03 |
78 | GO:0008047: enzyme activator activity | 6.51E-03 |
79 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 7.20E-03 |
80 | GO:0004161: dimethylallyltranstransferase activity | 7.20E-03 |
81 | GO:0005524: ATP binding | 7.46E-03 |
82 | GO:0000049: tRNA binding | 7.92E-03 |
83 | GO:0000155: phosphorelay sensor kinase activity | 8.66E-03 |
84 | GO:0004565: beta-galactosidase activity | 8.66E-03 |
85 | GO:0043424: protein histidine kinase binding | 1.27E-02 |
86 | GO:0004176: ATP-dependent peptidase activity | 1.36E-02 |
87 | GO:0008514: organic anion transmembrane transporter activity | 1.64E-02 |
88 | GO:0047134: protein-disulfide reductase activity | 1.73E-02 |
89 | GO:0005525: GTP binding | 1.94E-02 |
90 | GO:0004791: thioredoxin-disulfide reductase activity | 2.03E-02 |
91 | GO:0048038: quinone binding | 2.24E-02 |
92 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.46E-02 |
93 | GO:0008483: transaminase activity | 2.68E-02 |
94 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 2.68E-02 |
95 | GO:0003743: translation initiation factor activity | 2.79E-02 |
96 | GO:0016597: amino acid binding | 2.80E-02 |
97 | GO:0016887: ATPase activity | 2.88E-02 |
98 | GO:0003824: catalytic activity | 3.02E-02 |
99 | GO:0042802: identical protein binding | 3.03E-02 |
100 | GO:0004721: phosphoprotein phosphatase activity | 3.27E-02 |
101 | GO:0000287: magnesium ion binding | 3.62E-02 |
102 | GO:0003993: acid phosphatase activity | 4.30E-02 |
103 | GO:0016740: transferase activity | 4.36E-02 |
104 | GO:0003729: mRNA binding | 4.69E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0009344: nitrite reductase complex [NAD(P)H] | 0.00E+00 |
2 | GO:0005948: acetolactate synthase complex | 0.00E+00 |
3 | GO:0009571: proplastid stroma | 0.00E+00 |
4 | GO:0009507: chloroplast | 3.79E-51 |
5 | GO:0009570: chloroplast stroma | 5.80E-44 |
6 | GO:0009941: chloroplast envelope | 2.95E-27 |
7 | GO:0009579: thylakoid | 1.45E-16 |
8 | GO:0009543: chloroplast thylakoid lumen | 1.13E-14 |
9 | GO:0009535: chloroplast thylakoid membrane | 9.03E-13 |
10 | GO:0031977: thylakoid lumen | 7.41E-09 |
11 | GO:0009534: chloroplast thylakoid | 4.60E-07 |
12 | GO:0009654: photosystem II oxygen evolving complex | 2.07E-06 |
13 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 8.05E-06 |
14 | GO:0000311: plastid large ribosomal subunit | 2.34E-05 |
15 | GO:0030095: chloroplast photosystem II | 3.55E-05 |
16 | GO:0022626: cytosolic ribosome | 1.06E-04 |
17 | GO:0005840: ribosome | 1.85E-04 |
18 | GO:0019898: extrinsic component of membrane | 2.07E-04 |
19 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 2.27E-04 |
20 | GO:0010319: stromule | 3.21E-04 |
21 | GO:0048046: apoplast | 4.80E-04 |
22 | GO:0005875: microtubule associated complex | 8.76E-04 |
23 | GO:0009536: plastid | 1.02E-03 |
24 | GO:0009532: plastid stroma | 1.17E-03 |
25 | GO:0005874: microtubule | 2.01E-03 |
26 | GO:0031969: chloroplast membrane | 2.12E-03 |
27 | GO:0009706: chloroplast inner membrane | 2.21E-03 |
28 | GO:0009533: chloroplast stromal thylakoid | 3.47E-03 |
29 | GO:0000148: 1,3-beta-D-glucan synthase complex | 4.60E-03 |
30 | GO:0009539: photosystem II reaction center | 4.60E-03 |
31 | GO:0042644: chloroplast nucleoid | 5.22E-03 |
32 | GO:0045298: tubulin complex | 5.22E-03 |
33 | GO:0005763: mitochondrial small ribosomal subunit | 5.22E-03 |
34 | GO:0046658: anchored component of plasma membrane | 6.32E-03 |
35 | GO:0016324: apical plasma membrane | 6.51E-03 |
36 | GO:0000312: plastid small ribosomal subunit | 9.42E-03 |
37 | GO:0042651: thylakoid membrane | 1.27E-02 |
38 | GO:0010287: plastoglobule | 1.63E-02 |
39 | GO:0005871: kinesin complex | 1.73E-02 |
40 | GO:0005623: cell | 1.77E-02 |
41 | GO:0031225: anchored component of membrane | 1.79E-02 |
42 | GO:0005759: mitochondrial matrix | 2.17E-02 |
43 | GO:0009295: nucleoid | 2.68E-02 |
44 | GO:0005739: mitochondrion | 3.23E-02 |
45 | GO:0009505: plant-type cell wall | 3.67E-02 |
46 | GO:0015934: large ribosomal subunit | 3.90E-02 |
47 | GO:0022625: cytosolic large ribosomal subunit | 4.79E-02 |