co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G30140

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070212: protein poly-ADP-ribosylation	0.00E+00
2	GO:0070328: triglyceride homeostasis	0.00E+00
3	GO:0045792: negative regulation of cell size	0.00E+00
4	GO:0042430: indole-containing compound metabolic process	0.00E+00
5	GO:0055091: phospholipid homeostasis	0.00E+00
6	GO:0072660: maintenance of protein location in plasma membrane	0.00E+00
7	GO:0006457: protein folding	1.98E-08
8	GO:0046686: response to cadmium ion	1.23E-07
9	GO:0006511: ubiquitin-dependent protein catabolic process	3.42E-07
10	GO:0009651: response to salt stress	4.94E-06
11	GO:0034976: response to endoplasmic reticulum stress	1.60E-05
12	GO:0009408: response to heat	2.75E-05
13	GO:0009617: response to bacterium	3.60E-05
14	GO:0009626: plant-type hypersensitive response	7.92E-05
15	GO:0051245: negative regulation of cellular defense response	1.35E-04
16	GO:0080173: male-female gamete recognition during double fertilization	1.35E-04
17	GO:0060862: negative regulation of floral organ abscission	1.35E-04
18	GO:1900424: regulation of defense response to bacterium	1.35E-04
19	GO:0048448: stamen morphogenesis	1.35E-04
20	GO:0010450: inflorescence meristem growth	1.35E-04
21	GO:0019510: S-adenosylhomocysteine catabolic process	1.35E-04
22	GO:0006098: pentose-phosphate shunt	1.40E-04
23	GO:0009615: response to virus	1.40E-04
24	GO:0046685: response to arsenic-containing substance	1.40E-04
25	GO:0009073: aromatic amino acid family biosynthetic process	2.34E-04
26	GO:0019521: D-gluconate metabolic process	3.11E-04
27	GO:0031349: positive regulation of defense response	3.11E-04
28	GO:0033353: S-adenosylmethionine cycle	3.11E-04
29	GO:0006123: mitochondrial electron transport, cytochrome c to oxygen	3.11E-04
30	GO:0055088: lipid homeostasis	3.11E-04
31	GO:0048833: specification of floral organ number	3.11E-04
32	GO:0009863: salicylic acid mediated signaling pathway	4.84E-04
33	GO:0048281: inflorescence morphogenesis	5.13E-04
34	GO:0010581: regulation of starch biosynthetic process	5.13E-04
35	GO:0055074: calcium ion homeostasis	5.13E-04
36	GO:0072661: protein targeting to plasma membrane	5.13E-04
37	GO:0009555: pollen development	6.47E-04
38	GO:0006612: protein targeting to membrane	7.34E-04
39	GO:0010148: transpiration	7.34E-04
40	GO:0006515: misfolded or incompletely synthesized protein catabolic process	7.34E-04
41	GO:0046836: glycolipid transport	7.34E-04
42	GO:0055089: fatty acid homeostasis	7.34E-04
43	GO:0045727: positive regulation of translation	9.73E-04
44	GO:1902584: positive regulation of response to water deprivation	9.73E-04
45	GO:0010363: regulation of plant-type hypersensitive response	9.73E-04
46	GO:0006621: protein retention in ER lumen	9.73E-04
47	GO:0033356: UDP-L-arabinose metabolic process	9.73E-04
48	GO:0034440: lipid oxidation	9.73E-04
49	GO:0006346: methylation-dependent chromatin silencing	9.73E-04
50	GO:0010193: response to ozone	1.15E-03
51	GO:0032502: developmental process	1.22E-03
52	GO:0045927: positive regulation of growth	1.23E-03
53	GO:0046283: anthocyanin-containing compound metabolic process	1.23E-03
54	GO:0006564: L-serine biosynthetic process	1.23E-03
55	GO:0030163: protein catabolic process	1.30E-03
56	GO:0006796: phosphate-containing compound metabolic process	1.51E-03
57	GO:0010942: positive regulation of cell death	1.51E-03
58	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.81E-03
59	GO:0034389: lipid particle organization	1.81E-03
60	GO:0009094: L-phenylalanine biosynthetic process	1.81E-03
61	GO:0009423: chorismate biosynthetic process	1.81E-03
62	GO:0080086: stamen filament development	1.81E-03
63	GO:0009627: systemic acquired resistance	1.83E-03
64	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.03E-03
65	GO:0080186: developmental vegetative growth	2.12E-03
66	GO:0071669: plant-type cell wall organization or biogenesis	2.12E-03
67	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	2.12E-03
68	GO:0006979: response to oxidative stress	2.25E-03
69	GO:0050821: protein stabilization	2.46E-03
70	GO:0031540: regulation of anthocyanin biosynthetic process	2.46E-03
71	GO:0006102: isocitrate metabolic process	2.46E-03
72	GO:0009880: embryonic pattern specification	2.81E-03
73	GO:0010497: plasmodesmata-mediated intercellular transport	2.81E-03
74	GO:0010262: somatic embryogenesis	2.81E-03
75	GO:0010204: defense response signaling pathway, resistance gene-independent	2.81E-03
76	GO:0006099: tricarboxylic acid cycle	2.82E-03
77	GO:0009611: response to wounding	3.12E-03
78	GO:0010112: regulation of systemic acquired resistance	3.17E-03
79	GO:0098656: anion transmembrane transport	3.17E-03
80	GO:0030042: actin filament depolymerization	3.55E-03
81	GO:2000280: regulation of root development	3.55E-03
82	GO:0009409: response to cold	3.77E-03
83	GO:0009965: leaf morphogenesis	3.89E-03
84	GO:0009299: mRNA transcription	3.95E-03
85	GO:0009870: defense response signaling pathway, resistance gene-dependent	3.95E-03
86	GO:0006032: chitin catabolic process	3.95E-03
87	GO:0043069: negative regulation of programmed cell death	3.95E-03
88	GO:0016441: posttranscriptional gene silencing	3.95E-03
89	GO:0080167: response to karrikin	4.01E-03
90	GO:0016192: vesicle-mediated transport	4.28E-03
91	GO:0006816: calcium ion transport	4.36E-03
92	GO:0000272: polysaccharide catabolic process	4.36E-03
93	GO:0006820: anion transport	4.79E-03
94	GO:0015706: nitrate transport	4.79E-03
95	GO:0051603: proteolysis involved in cellular protein catabolic process	4.82E-03
96	GO:0010224: response to UV-B	4.82E-03
97	GO:0006508: proteolysis	4.95E-03
98	GO:0006807: nitrogen compound metabolic process	5.22E-03
99	GO:0010075: regulation of meristem growth	5.22E-03
100	GO:0006094: gluconeogenesis	5.22E-03
101	GO:0006886: intracellular protein transport	5.25E-03
102	GO:0006096: glycolytic process	5.50E-03
103	GO:0002237: response to molecule of bacterial origin	5.68E-03
104	GO:0009934: regulation of meristem structural organization	5.68E-03
105	GO:0010167: response to nitrate	6.14E-03
106	GO:0009901: anther dehiscence	6.14E-03
107	GO:0070588: calcium ion transmembrane transport	6.14E-03
108	GO:0000162: tryptophan biosynthetic process	6.62E-03
109	GO:0000027: ribosomal large subunit assembly	7.11E-03
110	GO:0009695: jasmonic acid biosynthetic process	7.62E-03
111	GO:0061077: chaperone-mediated protein folding	8.14E-03
112	GO:0048278: vesicle docking	8.14E-03
113	GO:0031408: oxylipin biosynthetic process	8.14E-03
114	GO:0016998: cell wall macromolecule catabolic process	8.14E-03
115	GO:0006730: one-carbon metabolic process	8.67E-03
116	GO:0007005: mitochondrion organization	8.67E-03
117	GO:0031348: negative regulation of defense response	8.67E-03
118	GO:0009411: response to UV	9.21E-03
119	GO:0040007: growth	9.21E-03
120	GO:0019722: calcium-mediated signaling	9.77E-03
121	GO:0009306: protein secretion	9.77E-03
122	GO:0042391: regulation of membrane potential	1.09E-02
123	GO:0048653: anther development	1.09E-02
124	GO:0048868: pollen tube development	1.15E-02
125	GO:0061025: membrane fusion	1.21E-02
126	GO:0010183: pollen tube guidance	1.27E-02
127	GO:0008654: phospholipid biosynthetic process	1.27E-02
128	GO:0006891: intra-Golgi vesicle-mediated transport	1.34E-02
129	GO:0009567: double fertilization forming a zygote and endosperm	1.53E-02
130	GO:0006952: defense response	1.56E-02
131	GO:0010286: heat acclimation	1.60E-02
132	GO:0016579: protein deubiquitination	1.66E-02
133	GO:0009816: defense response to bacterium, incompatible interaction	1.80E-02
134	GO:0006906: vesicle fusion	1.88E-02
135	GO:0042128: nitrate assimilation	1.88E-02
136	GO:0030244: cellulose biosynthetic process	2.09E-02
137	GO:0008219: cell death	2.09E-02
138	GO:0009832: plant-type cell wall biogenesis	2.17E-02
139	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.28E-02
140	GO:0010119: regulation of stomatal movement	2.32E-02
141	GO:0010043: response to zinc ion	2.32E-02
142	GO:0009867: jasmonic acid mediated signaling pathway	2.48E-02
143	GO:0045454: cell redox homeostasis	2.64E-02
144	GO:0006839: mitochondrial transport	2.72E-02
145	GO:0006887: exocytosis	2.80E-02
146	GO:0008283: cell proliferation	2.97E-02
147	GO:0051707: response to other organism	2.97E-02
148	GO:0009644: response to high light intensity	3.14E-02
149	GO:0042742: defense response to bacterium	3.31E-02
150	GO:0006855: drug transmembrane transport	3.31E-02
151	GO:0009846: pollen germination	3.49E-02
152	GO:0009620: response to fungus	4.42E-02
153	GO:0015031: protein transport	4.44E-02
154	GO:0009553: embryo sac development	4.62E-02
155	GO:0009624: response to nematode	4.71E-02

Rank	GO Term	Adjusted P value
1	GO:0052861: glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group	0.00E+00
2	GO:0004107: chorismate synthase activity	0.00E+00
3	GO:0042171: lysophosphatidic acid acyltransferase activity	0.00E+00
4	GO:0005046: KDEL sequence binding	0.00E+00
5	GO:0004298: threonine-type endopeptidase activity	4.92E-13
6	GO:0051082: unfolded protein binding	2.16E-10
7	GO:0008233: peptidase activity	1.20E-09
8	GO:0051287: NAD binding	4.18E-05
9	GO:0008237: metallopeptidase activity	1.18E-04
10	GO:0004013: adenosylhomocysteinase activity	1.35E-04
11	GO:0080042: ADP-glucose pyrophosphohydrolase activity	1.35E-04
12	GO:0004048: anthranilate phosphoribosyltransferase activity	1.35E-04
13	GO:0005388: calcium-transporting ATPase activity	3.08E-04
14	GO:0017110: nucleoside-diphosphatase activity	3.11E-04
15	GO:0070361: mitochondrial light strand promoter anti-sense binding	3.11E-04
16	GO:0052691: UDP-arabinopyranose mutase activity	3.11E-04
17	GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity	3.11E-04
18	GO:0004338: glucan exo-1,3-beta-glucosidase activity	3.11E-04
19	GO:0004634: phosphopyruvate hydratase activity	3.11E-04
20	GO:0080041: ADP-ribose pyrophosphohydrolase activity	3.11E-04
21	GO:0004617: phosphoglycerate dehydrogenase activity	3.11E-04
22	GO:0016165: linoleate 13S-lipoxygenase activity	5.13E-04
23	GO:0004540: ribonuclease activity	5.84E-04
24	GO:0004449: isocitrate dehydrogenase (NAD+) activity	7.34E-04
25	GO:0004108: citrate (Si)-synthase activity	7.34E-04
26	GO:0010178: IAA-amino acid conjugate hydrolase activity	7.34E-04
27	GO:0017089: glycolipid transporter activity	7.34E-04
28	GO:0003756: protein disulfide isomerase activity	7.52E-04
29	GO:0046923: ER retention sequence binding	9.73E-04
30	GO:0043495: protein anchor	9.73E-04
31	GO:0016866: intramolecular transferase activity	9.73E-04
32	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	9.73E-04
33	GO:0047769: arogenate dehydratase activity	9.73E-04
34	GO:0004664: prephenate dehydratase activity	9.73E-04
35	GO:0051861: glycolipid binding	9.73E-04
36	GO:0005507: copper ion binding	1.20E-03
37	GO:0004623: phospholipase A2 activity	1.23E-03
38	GO:0047631: ADP-ribose diphosphatase activity	1.23E-03
39	GO:0005516: calmodulin binding	1.32E-03
40	GO:0000210: NAD+ diphosphatase activity	1.51E-03
41	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	1.51E-03
42	GO:0016462: pyrophosphatase activity	1.51E-03
43	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	1.51E-03
44	GO:0004332: fructose-bisphosphate aldolase activity	1.51E-03
45	GO:0016597: amino acid binding	1.56E-03
46	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	1.81E-03
47	GO:0005515: protein binding	1.95E-03
48	GO:0004427: inorganic diphosphatase activity	2.12E-03
49	GO:0008121: ubiquinol-cytochrome-c reductase activity	2.12E-03
50	GO:0008320: protein transmembrane transporter activity	2.12E-03
51	GO:0016887: ATPase activity	2.46E-03
52	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.46E-03
53	GO:0004564: beta-fructofuranosidase activity	2.46E-03
54	GO:0015288: porin activity	2.46E-03
55	GO:0005524: ATP binding	2.60E-03
56	GO:0008308: voltage-gated anion channel activity	2.81E-03
57	GO:0000287: magnesium ion binding	2.98E-03
58	GO:0004575: sucrose alpha-glucosidase activity	3.55E-03
59	GO:0015112: nitrate transmembrane transporter activity	3.55E-03
60	GO:0004713: protein tyrosine kinase activity	3.95E-03
61	GO:0004568: chitinase activity	3.95E-03
62	GO:0015114: phosphate ion transmembrane transporter activity	5.22E-03
63	GO:0031072: heat shock protein binding	5.22E-03
64	GO:0005262: calcium channel activity	5.22E-03
65	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	5.68E-03
66	GO:0008061: chitin binding	6.14E-03
67	GO:0003712: transcription cofactor activity	6.14E-03
68	GO:0004190: aspartic-type endopeptidase activity	6.14E-03
69	GO:0030552: cAMP binding	6.14E-03
70	GO:0030553: cGMP binding	6.14E-03
71	GO:0004725: protein tyrosine phosphatase activity	6.62E-03
72	GO:0005216: ion channel activity	7.62E-03
73	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	8.14E-03
74	GO:0004176: ATP-dependent peptidase activity	8.14E-03
75	GO:0008810: cellulase activity	9.21E-03
76	GO:0016760: cellulose synthase (UDP-forming) activity	9.21E-03
77	GO:0030551: cyclic nucleotide binding	1.09E-02
78	GO:0005249: voltage-gated potassium channel activity	1.09E-02
79	GO:0010181: FMN binding	1.21E-02
80	GO:0016853: isomerase activity	1.21E-02
81	GO:0004872: receptor activity	1.27E-02
82	GO:0004843: thiol-dependent ubiquitin-specific protease activity	1.34E-02
83	GO:0004721: phosphoprotein phosphatase activity	1.95E-02
84	GO:0030247: polysaccharide binding	1.95E-02
85	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.95E-02
86	GO:0008236: serine-type peptidase activity	2.02E-02
87	GO:0015238: drug transmembrane transporter activity	2.17E-02
88	GO:0004222: metalloendopeptidase activity	2.24E-02
89	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.32E-02
90	GO:0030145: manganese ion binding	2.32E-02
91	GO:0003746: translation elongation factor activity	2.48E-02
92	GO:0000149: SNARE binding	2.64E-02
93	GO:0005484: SNAP receptor activity	2.97E-02
94	GO:0005509: calcium ion binding	2.99E-02
95	GO:0051537: 2 iron, 2 sulfur cluster binding	3.14E-02
96	GO:0046872: metal ion binding	3.19E-02
97	GO:0004674: protein serine/threonine kinase activity	3.46E-02
98	GO:0009055: electron carrier activity	3.49E-02
99	GO:0005215: transporter activity	3.75E-02
100	GO:0016298: lipase activity	3.76E-02
101	GO:0031625: ubiquitin protein ligase binding	3.95E-02
102	GO:0045735: nutrient reservoir activity	4.13E-02
103	GO:0003779: actin binding	4.62E-02
104	GO:0016746: transferase activity, transferring acyl groups	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0005839: proteasome core complex	4.92E-13
3	GO:0019773: proteasome core complex, alpha-subunit complex	4.80E-11
4	GO:0000502: proteasome complex	4.85E-11
5	GO:0005774: vacuolar membrane	9.81E-11
6	GO:0005886: plasma membrane	3.35E-10
7	GO:0005788: endoplasmic reticulum lumen	3.11E-09
8	GO:0005829: cytosol	7.13E-09
9	GO:0005783: endoplasmic reticulum	1.35E-08
10	GO:0005618: cell wall	2.05E-07
11	GO:0005741: mitochondrial outer membrane	5.15E-07
12	GO:0005740: mitochondrial envelope	4.19E-06
13	GO:0005773: vacuole	6.62E-06
14	GO:0048046: apoplast	7.10E-06
15	GO:0005801: cis-Golgi network	5.23E-05
16	GO:0022626: cytosolic ribosome	1.05E-04
17	GO:0031351: integral component of plastid membrane	1.35E-04
18	GO:0000138: Golgi trans cisterna	1.35E-04
19	GO:0009506: plasmodesma	2.91E-04
20	GO:0000015: phosphopyruvate hydratase complex	3.11E-04
21	GO:0030134: ER to Golgi transport vesicle	3.11E-04
22	GO:0005795: Golgi stack	3.91E-04
23	GO:0009507: chloroplast	5.47E-04
24	GO:0030660: Golgi-associated vesicle membrane	9.73E-04
25	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	9.73E-04
26	GO:0005737: cytoplasm	1.41E-03
27	GO:0005759: mitochondrial matrix	1.56E-03
28	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	2.46E-03
29	GO:0005811: lipid particle	2.81E-03
30	GO:0046930: pore complex	2.81E-03
31	GO:0005765: lysosomal membrane	4.36E-03
32	GO:0008541: proteasome regulatory particle, lid subcomplex	4.36E-03
33	GO:0031012: extracellular matrix	5.22E-03
34	GO:0005750: mitochondrial respiratory chain complex III	5.68E-03
35	GO:0031225: anchored component of membrane	5.93E-03
36	GO:0005758: mitochondrial intermembrane space	7.11E-03
37	GO:0070469: respiratory chain	7.62E-03
38	GO:0015629: actin cytoskeleton	9.21E-03
39	GO:0016020: membrane	1.03E-02
40	GO:0009536: plastid	1.20E-02
41	GO:0009504: cell plate	1.27E-02
42	GO:0005739: mitochondrion	1.34E-02
43	GO:0005789: endoplasmic reticulum membrane	1.67E-02
44	GO:0000151: ubiquitin ligase complex	2.09E-02
45	GO:0005819: spindle	2.64E-02
46	GO:0031201: SNARE complex	2.80E-02
47	GO:0005622: intracellular	2.81E-02
48	GO:0090406: pollen tube	2.97E-02
49	GO:0005887: integral component of plasma membrane	4.41E-02
50	GO:0009706: chloroplast inner membrane	4.71E-02