Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G29310

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:2000505: regulation of energy homeostasis0.00E+00
2GO:0006106: fumarate metabolic process1.39E-05
3GO:0010305: leaf vascular tissue pattern formation4.41E-05
4GO:0009800: cinnamic acid biosynthetic process9.94E-05
5GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity9.94E-05
6GO:0010109: regulation of photosynthesis1.37E-04
7GO:0006751: glutathione catabolic process2.22E-04
8GO:0006559: L-phenylalanine catabolic process2.22E-04
9GO:1900057: positive regulation of leaf senescence3.15E-04
10GO:0046856: phosphatidylinositol dephosphorylation6.34E-04
11GO:0009773: photosynthetic electron transport in photosystem I6.34E-04
12GO:0007166: cell surface receptor signaling pathway7.35E-04
13GO:0006108: malate metabolic process7.52E-04
14GO:0010588: cotyledon vascular tissue pattern formation7.52E-04
15GO:0010207: photosystem II assembly8.13E-04
16GO:2000377: regulation of reactive oxygen species metabolic process1.00E-03
17GO:0048511: rhythmic process1.13E-03
18GO:0031348: negative regulation of defense response1.20E-03
19GO:0009789: positive regulation of abscisic acid-activated signaling pathway1.41E-03
20GO:0080022: primary root development1.49E-03
21GO:0010087: phloem or xylem histogenesis1.49E-03
22GO:0071472: cellular response to salt stress1.56E-03
23GO:0042752: regulation of circadian rhythm1.64E-03
24GO:0009737: response to abscisic acid2.03E-03
25GO:0042128: nitrate assimilation2.48E-03
26GO:0009738: abscisic acid-activated signaling pathway2.96E-03
27GO:0009631: cold acclimation3.03E-03
28GO:0045087: innate immune response3.22E-03
29GO:0006099: tricarboxylic acid cycle3.32E-03
30GO:0048367: shoot system development5.38E-03
31GO:0006952: defense response6.81E-03
32GO:0080167: response to karrikin1.38E-02
33GO:0045454: cell redox homeostasis1.57E-02
34GO:0045892: negative regulation of transcription, DNA-templated1.59E-02
35GO:0016042: lipid catabolic process1.79E-02
36GO:0009651: response to salt stress2.08E-02
37GO:0009734: auxin-activated signaling pathway2.33E-02
38GO:0009416: response to light stimulus2.74E-02
39GO:0009611: response to wounding2.79E-02
40GO:0035556: intracellular signal transduction2.85E-02
41GO:0006351: transcription, DNA-templated4.10E-02
42GO:0009414: response to water deprivation4.46E-02
43GO:0006468: protein phosphorylation4.77E-02
44GO:0009733: response to auxin4.93E-02
RankGO TermAdjusted P value
1GO:0004333: fumarate hydratase activity1.39E-05
2GO:0003839: gamma-glutamylcyclotransferase activity3.65E-05
3GO:0045548: phenylalanine ammonia-lyase activity6.55E-05
4GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity2.22E-04
5GO:0004629: phospholipase C activity2.22E-04
6GO:0042578: phosphoric ester hydrolase activity2.22E-04
7GO:0004017: adenylate kinase activity2.68E-04
8GO:0004435: phosphatidylinositol phospholipase C activity2.68E-04
9GO:0004675: transmembrane receptor protein serine/threonine kinase activity6.05E-04
10GO:0008794: arsenate reductase (glutaredoxin) activity6.34E-04
11GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity6.93E-04
12GO:0004871: signal transducer activity1.49E-03
13GO:0009055: electron carrier activity1.87E-03
14GO:0008483: transaminase activity2.13E-03
15GO:0051537: 2 iron, 2 sulfur cluster binding4.04E-03
16GO:0015035: protein disulfide oxidoreductase activity6.10E-03
17GO:0003743: translation initiation factor activity9.75E-03
18GO:0042802: identical protein binding1.03E-02
19GO:0016787: hydrolase activity1.32E-02
20GO:0005507: copper ion binding3.53E-02
21GO:0003700: transcription factor activity, sequence-specific DNA binding3.95E-02
22GO:0005515: protein binding4.11E-02
23GO:0003824: catalytic activity4.85E-02
RankGO TermAdjusted P value
1GO:0045239: tricarboxylic acid cycle enzyme complex1.39E-05
2GO:0030093: chloroplast photosystem I3.65E-05
3GO:0008180: COP9 signalosome4.68E-04
4GO:0009508: plastid chromosome7.52E-04
5GO:0009295: nucleoid2.13E-03
6GO:0009535: chloroplast thylakoid membrane2.16E-03
7GO:0019005: SCF ubiquitin ligase complex2.75E-03
8GO:0031977: thylakoid lumen3.63E-03
9GO:0009579: thylakoid3.65E-03
10GO:0009534: chloroplast thylakoid3.69E-03
11GO:0000502: proteasome complex4.69E-03
12GO:0009543: chloroplast thylakoid lumen6.99E-03
13GO:0009507: chloroplast7.46E-03
14GO:0009570: chloroplast stroma4.05E-02
Gene type



Gene DE type