GO Enrichment Analysis of Co-expressed Genes with
AT2G28940
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:2000541: positive regulation of protein geranylgeranylation | 0.00E+00 |
| 2 | GO:0010398: xylogalacturonan metabolic process | 0.00E+00 |
| 3 | GO:0043269: regulation of ion transport | 0.00E+00 |
| 4 | GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase | 0.00E+00 |
| 5 | GO:0000162: tryptophan biosynthetic process | 3.63E-06 |
| 6 | GO:0006014: D-ribose metabolic process | 1.28E-05 |
| 7 | GO:0007064: mitotic sister chromatid cohesion | 7.72E-05 |
| 8 | GO:0071365: cellular response to auxin stimulus | 1.07E-04 |
| 9 | GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine | 1.70E-04 |
| 10 | GO:0007154: cell communication | 1.70E-04 |
| 11 | GO:0019441: tryptophan catabolic process to kynurenine | 1.70E-04 |
| 12 | GO:0015914: phospholipid transport | 1.70E-04 |
| 13 | GO:0002230: positive regulation of defense response to virus by host | 2.86E-04 |
| 14 | GO:1902290: positive regulation of defense response to oomycetes | 4.15E-04 |
| 15 | GO:0019252: starch biosynthetic process | 4.67E-04 |
| 16 | GO:0033320: UDP-D-xylose biosynthetic process | 5.53E-04 |
| 17 | GO:1902584: positive regulation of response to water deprivation | 5.53E-04 |
| 18 | GO:0042273: ribosomal large subunit biogenesis | 5.53E-04 |
| 19 | GO:0005513: detection of calcium ion | 7.00E-04 |
| 20 | GO:0018344: protein geranylgeranylation | 7.00E-04 |
| 21 | GO:0000304: response to singlet oxygen | 7.00E-04 |
| 22 | GO:1900425: negative regulation of defense response to bacterium | 8.57E-04 |
| 23 | GO:0006574: valine catabolic process | 8.57E-04 |
| 24 | GO:0042732: D-xylose metabolic process | 8.57E-04 |
| 25 | GO:0009267: cellular response to starvation | 8.57E-04 |
| 26 | GO:0009612: response to mechanical stimulus | 1.02E-03 |
| 27 | GO:0006694: steroid biosynthetic process | 1.02E-03 |
| 28 | GO:0007568: aging | 1.05E-03 |
| 29 | GO:1900057: positive regulation of leaf senescence | 1.19E-03 |
| 30 | GO:0006099: tricarboxylic acid cycle | 1.20E-03 |
| 31 | GO:0006102: isocitrate metabolic process | 1.37E-03 |
| 32 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 1.37E-03 |
| 33 | GO:0009699: phenylpropanoid biosynthetic process | 1.56E-03 |
| 34 | GO:0006468: protein phosphorylation | 1.59E-03 |
| 35 | GO:0055114: oxidation-reduction process | 1.76E-03 |
| 36 | GO:0090333: regulation of stomatal closure | 1.76E-03 |
| 37 | GO:0006098: pentose-phosphate shunt | 1.76E-03 |
| 38 | GO:1900426: positive regulation of defense response to bacterium | 1.97E-03 |
| 39 | GO:0043069: negative regulation of programmed cell death | 2.19E-03 |
| 40 | GO:0030148: sphingolipid biosynthetic process | 2.41E-03 |
| 41 | GO:0052544: defense response by callose deposition in cell wall | 2.41E-03 |
| 42 | GO:0000266: mitochondrial fission | 2.64E-03 |
| 43 | GO:0048467: gynoecium development | 3.12E-03 |
| 44 | GO:0009225: nucleotide-sugar metabolic process | 3.37E-03 |
| 45 | GO:0080147: root hair cell development | 3.89E-03 |
| 46 | GO:0046686: response to cadmium ion | 4.50E-03 |
| 47 | GO:0016226: iron-sulfur cluster assembly | 4.73E-03 |
| 48 | GO:0006012: galactose metabolic process | 5.02E-03 |
| 49 | GO:0071215: cellular response to abscisic acid stimulus | 5.02E-03 |
| 50 | GO:0008284: positive regulation of cell proliferation | 5.62E-03 |
| 51 | GO:0010468: regulation of gene expression | 5.68E-03 |
| 52 | GO:0006885: regulation of pH | 6.24E-03 |
| 53 | GO:0006662: glycerol ether metabolic process | 6.24E-03 |
| 54 | GO:0045489: pectin biosynthetic process | 6.24E-03 |
| 55 | GO:0048544: recognition of pollen | 6.56E-03 |
| 56 | GO:0009851: auxin biosynthetic process | 6.89E-03 |
| 57 | GO:0000302: response to reactive oxygen species | 7.22E-03 |
| 58 | GO:0002229: defense response to oomycetes | 7.22E-03 |
| 59 | GO:0010193: response to ozone | 7.22E-03 |
| 60 | GO:0009630: gravitropism | 7.56E-03 |
| 61 | GO:0007264: small GTPase mediated signal transduction | 7.56E-03 |
| 62 | GO:0010583: response to cyclopentenone | 7.56E-03 |
| 63 | GO:0080167: response to karrikin | 9.13E-03 |
| 64 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 9.44E-03 |
| 65 | GO:0046777: protein autophosphorylation | 9.76E-03 |
| 66 | GO:0016051: carbohydrate biosynthetic process | 1.33E-02 |
| 67 | GO:0034599: cellular response to oxidative stress | 1.37E-02 |
| 68 | GO:0051707: response to other organism | 1.59E-02 |
| 69 | GO:0006812: cation transport | 1.87E-02 |
| 70 | GO:0006364: rRNA processing | 1.97E-02 |
| 71 | GO:0006813: potassium ion transport | 1.97E-02 |
| 72 | GO:0009735: response to cytokinin | 2.20E-02 |
| 73 | GO:0006096: glycolytic process | 2.21E-02 |
| 74 | GO:0009620: response to fungus | 2.37E-02 |
| 75 | GO:0018105: peptidyl-serine phosphorylation | 2.58E-02 |
| 76 | GO:0006633: fatty acid biosynthetic process | 3.49E-02 |
| 77 | GO:0010150: leaf senescence | 3.73E-02 |
| 78 | GO:0007166: cell surface receptor signaling pathway | 4.10E-02 |
| 79 | GO:0008380: RNA splicing | 4.23E-02 |
| 80 | GO:0009617: response to bacterium | 4.23E-02 |
| 81 | GO:0006508: proteolysis | 4.45E-02 |
| 82 | GO:0042742: defense response to bacterium | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity | 0.00E+00 |
| 2 | GO:0016603: glutaminyl-peptide cyclotransferase activity | 0.00E+00 |
| 3 | GO:0050269: coniferyl-aldehyde dehydrogenase activity | 0.00E+00 |
| 4 | GO:0005092: GDP-dissociation inhibitor activity | 0.00E+00 |
| 5 | GO:0004834: tryptophan synthase activity | 4.96E-06 |
| 6 | GO:0004747: ribokinase activity | 1.83E-05 |
| 7 | GO:0008865: fructokinase activity | 3.30E-05 |
| 8 | GO:0000386: second spliceosomal transesterification activity | 7.07E-05 |
| 9 | GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity | 7.07E-05 |
| 10 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 7.07E-05 |
| 11 | GO:0033984: indole-3-glycerol-phosphate lyase activity | 7.07E-05 |
| 12 | GO:0004713: protein tyrosine kinase activity | 7.72E-05 |
| 13 | GO:0045140: inositol phosphoceramide synthase activity | 1.70E-04 |
| 14 | GO:0004061: arylformamidase activity | 1.70E-04 |
| 15 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 2.86E-04 |
| 16 | GO:0005093: Rab GDP-dissociation inhibitor activity | 2.86E-04 |
| 17 | GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity | 2.86E-04 |
| 18 | GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity | 2.86E-04 |
| 19 | GO:0016301: kinase activity | 3.25E-04 |
| 20 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 4.15E-04 |
| 21 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 5.53E-04 |
| 22 | GO:0004674: protein serine/threonine kinase activity | 5.93E-04 |
| 23 | GO:0017137: Rab GTPase binding | 7.00E-04 |
| 24 | GO:0004029: aldehyde dehydrogenase (NAD) activity | 8.57E-04 |
| 25 | GO:0035252: UDP-xylosyltransferase activity | 8.57E-04 |
| 26 | GO:0048040: UDP-glucuronate decarboxylase activity | 8.57E-04 |
| 27 | GO:0005524: ATP binding | 9.31E-04 |
| 28 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 1.02E-03 |
| 29 | GO:0004656: procollagen-proline 4-dioxygenase activity | 1.02E-03 |
| 30 | GO:0070403: NAD+ binding | 1.02E-03 |
| 31 | GO:0102425: myricetin 3-O-glucosyltransferase activity | 1.19E-03 |
| 32 | GO:0102360: daphnetin 3-O-glucosyltransferase activity | 1.19E-03 |
| 33 | GO:0004034: aldose 1-epimerase activity | 1.37E-03 |
| 34 | GO:0047893: flavonol 3-O-glucosyltransferase activity | 1.37E-03 |
| 35 | GO:0030955: potassium ion binding | 1.97E-03 |
| 36 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 1.97E-03 |
| 37 | GO:0004743: pyruvate kinase activity | 1.97E-03 |
| 38 | GO:0051536: iron-sulfur cluster binding | 3.89E-03 |
| 39 | GO:0031418: L-ascorbic acid binding | 3.89E-03 |
| 40 | GO:0035251: UDP-glucosyltransferase activity | 4.44E-03 |
| 41 | GO:0003727: single-stranded RNA binding | 5.32E-03 |
| 42 | GO:0047134: protein-disulfide reductase activity | 5.62E-03 |
| 43 | GO:0005451: monovalent cation:proton antiporter activity | 5.93E-03 |
| 44 | GO:0030246: carbohydrate binding | 6.49E-03 |
| 45 | GO:0004791: thioredoxin-disulfide reductase activity | 6.56E-03 |
| 46 | GO:0016853: isomerase activity | 6.56E-03 |
| 47 | GO:0015299: solute:proton antiporter activity | 6.56E-03 |
| 48 | GO:0010181: FMN binding | 6.56E-03 |
| 49 | GO:0003682: chromatin binding | 7.78E-03 |
| 50 | GO:0015385: sodium:proton antiporter activity | 7.90E-03 |
| 51 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 7.90E-03 |
| 52 | GO:0008233: peptidase activity | 8.97E-03 |
| 53 | GO:0051213: dioxygenase activity | 9.34E-03 |
| 54 | GO:0005509: calcium ion binding | 9.85E-03 |
| 55 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.01E-02 |
| 56 | GO:0004683: calmodulin-dependent protein kinase activity | 1.05E-02 |
| 57 | GO:0004806: triglyceride lipase activity | 1.05E-02 |
| 58 | GO:0030247: polysaccharide binding | 1.05E-02 |
| 59 | GO:0005506: iron ion binding | 1.07E-02 |
| 60 | GO:0008236: serine-type peptidase activity | 1.09E-02 |
| 61 | GO:0005096: GTPase activator activity | 1.17E-02 |
| 62 | GO:0003824: catalytic activity | 1.23E-02 |
| 63 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.33E-02 |
| 64 | GO:0003924: GTPase activity | 1.35E-02 |
| 65 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 1.41E-02 |
| 66 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.46E-02 |
| 67 | GO:0051287: NAD binding | 1.82E-02 |
| 68 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 2.37E-02 |
| 69 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 2.37E-02 |
| 70 | GO:0015035: protein disulfide oxidoreductase activity | 2.58E-02 |
| 71 | GO:0016746: transferase activity, transferring acyl groups | 2.58E-02 |
| 72 | GO:0016758: transferase activity, transferring hexosyl groups | 2.91E-02 |
| 73 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 3.02E-02 |
| 74 | GO:0015144: carbohydrate transmembrane transporter activity | 3.37E-02 |
| 75 | GO:0019825: oxygen binding | 3.42E-02 |
| 76 | GO:0005351: sugar:proton symporter activity | 3.67E-02 |
| 77 | GO:0008017: microtubule binding | 3.85E-02 |
| 78 | GO:0008194: UDP-glycosyltransferase activity | 4.04E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045252: oxoglutarate dehydrogenase complex | 7.07E-05 |
| 2 | GO:0005886: plasma membrane | 3.48E-04 |
| 3 | GO:0005968: Rab-protein geranylgeranyltransferase complex | 4.15E-04 |
| 4 | GO:0016021: integral component of membrane | 5.22E-04 |
| 5 | GO:0030687: preribosome, large subunit precursor | 1.19E-03 |
| 6 | GO:0034399: nuclear periphery | 1.37E-03 |
| 7 | GO:0005829: cytosol | 1.77E-03 |
| 8 | GO:0005578: proteinaceous extracellular matrix | 2.88E-03 |
| 9 | GO:0005783: endoplasmic reticulum | 4.29E-03 |
| 10 | GO:0016020: membrane | 7.97E-03 |
| 11 | GO:0005802: trans-Golgi network | 8.10E-03 |
| 12 | GO:0032580: Golgi cisterna membrane | 8.25E-03 |
| 13 | GO:0000325: plant-type vacuole | 1.25E-02 |
| 14 | GO:0031902: late endosome membrane | 1.50E-02 |
| 15 | GO:0000139: Golgi membrane | 1.60E-02 |
| 16 | GO:0005789: endoplasmic reticulum membrane | 1.87E-02 |
| 17 | GO:0005681: spliceosomal complex | 2.21E-02 |
| 18 | GO:0005747: mitochondrial respiratory chain complex I | 2.26E-02 |
| 19 | GO:0009524: phragmoplast | 3.08E-02 |
| 20 | GO:0005768: endosome | 4.36E-02 |