co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G28410

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042759: long-chain fatty acid biosynthetic process	5.03E-05
2	GO:0044208: 'de novo' AMP biosynthetic process	1.23E-04
3	GO:0006869: lipid transport	1.28E-04
4	GO:0006065: UDP-glucuronate biosynthetic process	2.11E-04
5	GO:0090506: axillary shoot meristem initiation	2.11E-04
6	GO:0010583: response to cyclopentenone	3.45E-04
7	GO:0009956: radial pattern formation	4.15E-04
8	GO:0009765: photosynthesis, light harvesting	4.15E-04
9	GO:0000919: cell plate assembly	4.15E-04
10	GO:0009627: systemic acquired resistance	5.19E-04
11	GO:0007094: mitotic spindle assembly checkpoint	5.26E-04
12	GO:0016123: xanthophyll biosynthetic process	5.26E-04
13	GO:0016120: carotene biosynthetic process	5.26E-04
14	GO:0009955: adaxial/abaxial pattern specification	7.68E-04
15	GO:0030643: cellular phosphate ion homeostasis	7.68E-04
16	GO:0010067: procambium histogenesis	7.68E-04
17	GO:1901259: chloroplast rRNA processing	7.68E-04
18	GO:0071446: cellular response to salicylic acid stimulus	8.97E-04
19	GO:0071669: plant-type cell wall organization or biogenesis	8.97E-04
20	GO:0045454: cell redox homeostasis	9.53E-04
21	GO:0009819: drought recovery	1.03E-03
22	GO:0071555: cell wall organization	1.16E-03
23	GO:0032544: plastid translation	1.17E-03
24	GO:0006189: 'de novo' IMP biosynthetic process	1.32E-03
25	GO:0055114: oxidation-reduction process	1.42E-03
26	GO:0007346: regulation of mitotic cell cycle	1.47E-03
27	GO:0010015: root morphogenesis	1.79E-03
28	GO:0007034: vacuolar transport	2.32E-03
29	GO:0010223: secondary shoot formation	2.32E-03
30	GO:0009933: meristem structural organization	2.32E-03
31	GO:0010025: wax biosynthetic process	2.69E-03
32	GO:0006071: glycerol metabolic process	2.69E-03
33	GO:0051301: cell division	2.82E-03
34	GO:0048278: vesicle docking	3.29E-03
35	GO:0030245: cellulose catabolic process	3.50E-03
36	GO:0001944: vasculature development	3.71E-03
37	GO:0010089: xylem development	3.93E-03
38	GO:0019722: calcium-mediated signaling	3.93E-03
39	GO:0016117: carotenoid biosynthetic process	4.15E-03
40	GO:0000271: polysaccharide biosynthetic process	4.37E-03
41	GO:0010087: phloem or xylem histogenesis	4.37E-03
42	GO:0042335: cuticle development	4.37E-03
43	GO:0010305: leaf vascular tissue pattern formation	4.60E-03
44	GO:0048544: recognition of pollen	4.83E-03
45	GO:0061025: membrane fusion	4.83E-03
46	GO:0007264: small GTPase mediated signal transduction	5.56E-03
47	GO:0007267: cell-cell signaling	6.33E-03
48	GO:0006906: vesicle fusion	7.40E-03
49	GO:0015995: chlorophyll biosynthetic process	7.68E-03
50	GO:0030244: cellulose biosynthetic process	8.24E-03
51	GO:0009832: plant-type cell wall biogenesis	8.53E-03
52	GO:0000160: phosphorelay signal transduction system	8.53E-03
53	GO:0009813: flavonoid biosynthetic process	8.53E-03
54	GO:0009409: response to cold	9.08E-03
55	GO:0007568: aging	9.12E-03
56	GO:0006887: exocytosis	1.10E-02
57	GO:0006631: fatty acid metabolic process	1.10E-02
58	GO:0042546: cell wall biogenesis	1.20E-02
59	GO:0009735: response to cytokinin	1.40E-02
60	GO:0009736: cytokinin-activated signaling pathway	1.44E-02
61	GO:0009809: lignin biosynthetic process	1.44E-02
62	GO:0048367: shoot system development	1.65E-02
63	GO:0006413: translational initiation	2.59E-02
64	GO:0045490: pectin catabolic process	2.72E-02
65	GO:0042742: defense response to bacterium	3.12E-02
66	GO:0006970: response to osmotic stress	3.91E-02
67	GO:0007049: cell cycle	4.01E-02
68	GO:0016192: vesicle-mediated transport	4.48E-02
69	GO:0046686: response to cadmium ion	4.83E-02

Rank	GO Term	Adjusted P value
1	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
2	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
3	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
4	GO:0051920: peroxiredoxin activity	3.92E-08
5	GO:0016209: antioxidant activity	1.01E-07
6	GO:0004018: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity	5.03E-05
7	GO:0070626: (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity	5.03E-05
8	GO:0004560: alpha-L-fucosidase activity	5.03E-05
9	GO:0005504: fatty acid binding	2.11E-04
10	GO:0003979: UDP-glucose 6-dehydrogenase activity	2.11E-04
11	GO:0008289: lipid binding	2.72E-04
12	GO:0045430: chalcone isomerase activity	4.15E-04
13	GO:0046527: glucosyltransferase activity	4.15E-04
14	GO:1990137: plant seed peroxidase activity	4.15E-04
15	GO:0004601: peroxidase activity	5.85E-04
16	GO:0051753: mannan synthase activity	7.68E-04
17	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	7.68E-04
18	GO:0052747: sinapyl alcohol dehydrogenase activity	1.03E-03
19	GO:0008889: glycerophosphodiester phosphodiesterase activity	1.32E-03
20	GO:0009055: electron carrier activity	1.34E-03
21	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.96E-03
22	GO:0033612: receptor serine/threonine kinase binding	3.29E-03
23	GO:0030570: pectate lyase activity	3.71E-03
24	GO:0008810: cellulase activity	3.71E-03
25	GO:0016760: cellulose synthase (UDP-forming) activity	3.71E-03
26	GO:0005507: copper ion binding	3.95E-03
27	GO:0005102: receptor binding	4.15E-03
28	GO:0016788: hydrolase activity, acting on ester bonds	4.82E-03
29	GO:0005509: calcium ion binding	5.58E-03
30	GO:0000156: phosphorelay response regulator activity	5.81E-03
31	GO:0016759: cellulose synthase activity	6.07E-03
32	GO:0016722: oxidoreductase activity, oxidizing metal ions	6.33E-03
33	GO:0052689: carboxylic ester hydrolase activity	6.46E-03
34	GO:0030145: manganese ion binding	9.12E-03
35	GO:0003746: translation elongation factor activity	9.73E-03
36	GO:0000149: SNARE binding	1.03E-02
37	GO:0005484: SNAP receptor activity	1.16E-02
38	GO:0051287: NAD binding	1.33E-02
39	GO:0045735: nutrient reservoir activity	1.62E-02
40	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.65E-02
41	GO:0004650: polygalacturonase activity	1.73E-02
42	GO:0030599: pectinesterase activity	1.77E-02
43	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.03E-02
44	GO:0030246: carbohydrate binding	2.07E-02
45	GO:0019843: rRNA binding	2.16E-02
46	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.20E-02
47	GO:0016301: kinase activity	2.85E-02
48	GO:0003743: translation initiation factor activity	3.04E-02
49	GO:0016491: oxidoreductase activity	4.09E-02

Rank	GO Term	Adjusted P value
1	GO:0048046: apoplast	3.27E-15
2	GO:0046658: anchored component of plasma membrane	5.21E-08
3	GO:0031225: anchored component of membrane	1.13E-05
4	GO:0005853: eukaryotic translation elongation factor 1 complex	2.11E-04
5	GO:0005828: kinetochore microtubule	4.15E-04
6	GO:0010319: stromule	4.15E-04
7	GO:0005886: plasma membrane	4.38E-04
8	GO:0000776: kinetochore	5.26E-04
9	GO:0009534: chloroplast thylakoid	5.37E-04
10	GO:0000777: condensed chromosome kinetochore	7.68E-04
11	GO:0000815: ESCRT III complex	7.68E-04
12	GO:0010369: chromocenter	7.68E-04
13	GO:0009533: chloroplast stromal thylakoid	8.97E-04
14	GO:0005811: lipid particle	1.17E-03
15	GO:0005763: mitochondrial small ribosomal subunit	1.32E-03
16	GO:0005876: spindle microtubule	1.47E-03
17	GO:0009505: plant-type cell wall	1.63E-03
18	GO:0009507: chloroplast	2.25E-03
19	GO:0005576: extracellular region	2.98E-03
20	GO:0009504: cell plate	5.07E-03
21	GO:0009570: chloroplast stroma	5.67E-03
22	GO:0031969: chloroplast membrane	5.85E-03
23	GO:0005618: cell wall	9.36E-03
24	GO:0031201: SNARE complex	1.10E-02
25	GO:0005635: nuclear envelope	1.51E-02
26	GO:0009535: chloroplast thylakoid membrane	1.72E-02
27	GO:0012505: endomembrane system	1.80E-02
28	GO:0009579: thylakoid	1.84E-02
29	GO:0010287: plastoglobule	2.08E-02
30	GO:0009543: chloroplast thylakoid lumen	2.16E-02
31	GO:0009524: phragmoplast	2.24E-02
32	GO:0005615: extracellular space	2.95E-02
33	GO:0000139: Golgi membrane	4.21E-02
34	GO:0009941: chloroplast envelope	4.33E-02