co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G27060

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090071: negative regulation of ribosome biogenesis	0.00E+00
2	GO:0001736: establishment of planar polarity	1.17E-04
3	GO:0016042: lipid catabolic process	1.30E-04
4	GO:0015714: phosphoenolpyruvate transport	2.00E-04
5	GO:0090391: granum assembly	2.00E-04
6	GO:0046739: transport of virus in multicellular host	2.94E-04
7	GO:0010239: chloroplast mRNA processing	2.94E-04
8	GO:0009735: response to cytokinin	3.08E-04
9	GO:0009956: radial pattern formation	3.94E-04
10	GO:0015713: phosphoglycerate transport	3.94E-04
11	GO:0009627: systemic acquired resistance	4.81E-04
12	GO:0015995: chlorophyll biosynthetic process	5.06E-04
13	GO:0007568: aging	6.43E-04
14	GO:0017148: negative regulation of translation	7.31E-04
15	GO:0006694: steroid biosynthetic process	7.31E-04
16	GO:1901259: chloroplast rRNA processing	7.31E-04
17	GO:1900057: positive regulation of leaf senescence	8.54E-04
18	GO:0009395: phospholipid catabolic process	8.54E-04
19	GO:0010196: nonphotochemical quenching	8.54E-04
20	GO:0031540: regulation of anthocyanin biosynthetic process	9.81E-04
21	GO:0006353: DNA-templated transcription, termination	9.81E-04
22	GO:0032544: plastid translation	1.11E-03
23	GO:0009808: lignin metabolic process	1.11E-03
24	GO:0010497: plasmodesmata-mediated intercellular transport	1.11E-03
25	GO:0048829: root cap development	1.55E-03
26	GO:0048765: root hair cell differentiation	1.70E-03
27	GO:0010015: root morphogenesis	1.70E-03
28	GO:0016024: CDP-diacylglycerol biosynthetic process	1.86E-03
29	GO:0006006: glucose metabolic process	2.03E-03
30	GO:0010229: inflorescence development	2.03E-03
31	GO:0009718: anthocyanin-containing compound biosynthetic process	2.03E-03
32	GO:0009725: response to hormone	2.03E-03
33	GO:0010102: lateral root morphogenesis	2.03E-03
34	GO:0048467: gynoecium development	2.20E-03
35	GO:0010143: cutin biosynthetic process	2.20E-03
36	GO:0009933: meristem structural organization	2.20E-03
37	GO:0019253: reductive pentose-phosphate cycle	2.20E-03
38	GO:0042023: DNA endoreduplication	2.56E-03
39	GO:0003333: amino acid transmembrane transport	3.12E-03
40	GO:0030245: cellulose catabolic process	3.32E-03
41	GO:0009958: positive gravitropism	4.37E-03
42	GO:0010305: leaf vascular tissue pattern formation	4.37E-03
43	GO:0016132: brassinosteroid biosynthetic process	5.04E-03
44	GO:0010252: auxin homeostasis	5.75E-03
45	GO:0009733: response to auxin	6.48E-03
46	GO:0010027: thylakoid membrane organization	6.50E-03
47	GO:0006869: lipid transport	7.11E-03
48	GO:0010311: lateral root formation	8.09E-03
49	GO:0009834: plant-type secondary cell wall biogenesis	8.37E-03
50	GO:0006865: amino acid transport	8.93E-03
51	GO:0008283: cell proliferation	1.10E-02
52	GO:0009926: auxin polar transport	1.10E-02
53	GO:0009744: response to sucrose	1.10E-02
54	GO:0009734: auxin-activated signaling pathway	1.13E-02
55	GO:0009809: lignin biosynthetic process	1.36E-02
56	GO:0009416: response to light stimulus	1.42E-02
57	GO:0006096: glycolytic process	1.53E-02
58	GO:0009740: gibberellic acid mediated signaling pathway	1.67E-02
59	GO:0009624: response to nematode	1.75E-02
60	GO:0051726: regulation of cell cycle	1.82E-02
61	GO:0009058: biosynthetic process	2.13E-02
62	GO:0007623: circadian rhythm	2.57E-02
63	GO:0045490: pectin catabolic process	2.57E-02
64	GO:0009739: response to gibberellin	2.79E-02
65	GO:0009826: unidimensional cell growth	3.42E-02
66	GO:0007049: cell cycle	3.80E-02
67	GO:0009723: response to ethylene	3.90E-02
68	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.19E-02
69	GO:0006412: translation	4.46E-02
70	GO:0015979: photosynthesis	4.50E-02
71	GO:0045454: cell redox homeostasis	4.65E-02

Rank	GO Term	Adjusted P value
1	GO:0047661: amino-acid racemase activity	0.00E+00
2	GO:0050614: delta24-sterol reductase activity	0.00E+00
3	GO:0016788: hydrolase activity, acting on ester bonds	2.22E-06
4	GO:0052689: carboxylic ester hydrolase activity	4.75E-06
5	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	4.74E-05
6	GO:0015121: phosphoenolpyruvate:phosphate antiporter activity	4.74E-05
7	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	1.17E-04
8	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	2.00E-04
9	GO:0043023: ribosomal large subunit binding	2.94E-04
10	GO:0016851: magnesium chelatase activity	2.94E-04
11	GO:0015120: phosphoglycerate transmembrane transporter activity	3.94E-04
12	GO:0010011: auxin binding	3.94E-04
13	GO:0010328: auxin influx transmembrane transporter activity	3.94E-04
14	GO:0004040: amidase activity	5.00E-04
15	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	6.13E-04
16	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	6.13E-04
17	GO:0052747: sinapyl alcohol dehydrogenase activity	9.81E-04
18	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.86E-03
19	GO:0005528: FK506 binding	2.74E-03
20	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.26E-03
21	GO:0030570: pectate lyase activity	3.52E-03
22	GO:0008810: cellulase activity	3.52E-03
23	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	4.37E-03
24	GO:0008080: N-acetyltransferase activity	4.37E-03
25	GO:0004872: receptor activity	4.81E-03
26	GO:0004518: nuclease activity	5.28E-03
27	GO:0016791: phosphatase activity	5.75E-03
28	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	8.65E-03
29	GO:0003993: acid phosphatase activity	9.51E-03
30	GO:0050661: NADP binding	1.01E-02
31	GO:0008289: lipid binding	1.11E-02
32	GO:0043621: protein self-association	1.16E-02
33	GO:0015293: symporter activity	1.20E-02
34	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.23E-02
35	GO:0051287: NAD binding	1.26E-02
36	GO:0003690: double-stranded DNA binding	1.39E-02
37	GO:0015171: amino acid transmembrane transporter activity	1.46E-02
38	GO:0003779: actin binding	1.71E-02
39	GO:0016746: transferase activity, transferring acyl groups	1.78E-02
40	GO:0019843: rRNA binding	2.05E-02
41	GO:0016829: lyase activity	2.16E-02
42	GO:0015297: antiporter activity	2.49E-02
43	GO:0042802: identical protein binding	3.05E-02
44	GO:0003824: catalytic activity	3.17E-02
45	GO:0005215: transporter activity	3.19E-02
46	GO:0050660: flavin adenine dinucleotide binding	3.90E-02
47	GO:0003729: mRNA binding	4.28E-02

Rank	GO Term	Adjusted P value
1	GO:0009515: granal stacked thylakoid	4.74E-05
2	GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex	4.74E-05
3	GO:0010007: magnesium chelatase complex	2.00E-04
4	GO:0048046: apoplast	4.07E-04
5	GO:0009986: cell surface	8.54E-04
6	GO:0008180: COP9 signalosome	1.25E-03
7	GO:0009570: chloroplast stroma	1.31E-03
8	GO:0009505: plant-type cell wall	1.45E-03
9	GO:0009506: plasmodesma	1.57E-03
10	GO:0005576: extracellular region	2.26E-03
11	GO:0005886: plasma membrane	3.75E-03
12	GO:0019005: SCF ubiquitin ligase complex	7.81E-03
13	GO:0000502: proteasome complex	1.36E-02
14	GO:0009543: chloroplast thylakoid lumen	2.05E-02
15	GO:0031225: anchored component of membrane	2.22E-02
16	GO:0005840: ribosome	3.02E-02
17	GO:0009507: chloroplast	3.14E-02
18	GO:0005618: cell wall	3.19E-02
19	GO:0009941: chloroplast envelope	3.94E-02
20	GO:0031969: chloroplast membrane	4.09E-02