co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G26690

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0033494: ferulate metabolic process	0.00E+00
2	GO:0006066: alcohol metabolic process	0.00E+00
3	GO:0006810: transport	1.66E-06
4	GO:0009773: photosynthetic electron transport in photosystem I	1.44E-05
5	GO:0000038: very long-chain fatty acid metabolic process	1.44E-05
6	GO:0006168: adenine salvage	1.66E-05
7	GO:0006166: purine ribonucleoside salvage	1.66E-05
8	GO:0006183: GTP biosynthetic process	3.05E-05
9	GO:0010025: wax biosynthetic process	4.03E-05
10	GO:0006833: water transport	4.03E-05
11	GO:0044209: AMP salvage	4.91E-05
12	GO:0015979: photosynthesis	6.30E-05
13	GO:0071555: cell wall organization	1.04E-04
14	GO:0042335: cuticle development	1.22E-04
15	GO:0034220: ion transmembrane transport	1.22E-04
16	GO:0051180: vitamin transport	2.04E-04
17	GO:0046520: sphingoid biosynthetic process	2.04E-04
18	GO:0030974: thiamine pyrophosphate transport	2.04E-04
19	GO:0071277: cellular response to calcium ion	2.04E-04
20	GO:0033481: galacturonate biosynthetic process	2.04E-04
21	GO:1902458: positive regulation of stomatal opening	2.04E-04
22	GO:0010729: positive regulation of hydrogen peroxide biosynthetic process	2.04E-04
23	GO:0016126: sterol biosynthetic process	3.07E-04
24	GO:0009735: response to cytokinin	3.49E-04
25	GO:0010411: xyloglucan metabolic process	3.81E-04
26	GO:0009416: response to light stimulus	4.20E-04
27	GO:0009414: response to water deprivation	4.38E-04
28	GO:0043255: regulation of carbohydrate biosynthetic process	4.57E-04
29	GO:0010115: regulation of abscisic acid biosynthetic process	4.57E-04
30	GO:0015893: drug transport	4.57E-04
31	GO:1903426: regulation of reactive oxygen species biosynthetic process	4.57E-04
32	GO:0010024: phytochromobilin biosynthetic process	4.57E-04
33	GO:0006633: fatty acid biosynthetic process	5.46E-04
34	GO:0010143: cutin biosynthetic process	6.10E-04
35	GO:0010167: response to nitrate	6.82E-04
36	GO:0015714: phosphoenolpyruvate transport	7.44E-04
37	GO:0006788: heme oxidation	7.44E-04
38	GO:0042546: cell wall biogenesis	8.51E-04
39	GO:0016998: cell wall macromolecule catabolic process	1.01E-03
40	GO:0080170: hydrogen peroxide transmembrane transport	1.06E-03
41	GO:0006165: nucleoside diphosphate phosphorylation	1.06E-03
42	GO:0006228: UTP biosynthetic process	1.06E-03
43	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.06E-03
44	GO:0006241: CTP biosynthetic process	1.06E-03
45	GO:0009826: unidimensional cell growth	1.15E-03
46	GO:2000122: negative regulation of stomatal complex development	1.41E-03
47	GO:0031122: cytoplasmic microtubule organization	1.41E-03
48	GO:0015713: phosphoglycerate transport	1.41E-03
49	GO:0010037: response to carbon dioxide	1.41E-03
50	GO:0015976: carbon utilization	1.41E-03
51	GO:0045727: positive regulation of translation	1.41E-03
52	GO:0010182: sugar mediated signaling pathway	1.63E-03
53	GO:0016120: carotene biosynthetic process	1.80E-03
54	GO:0006656: phosphatidylcholine biosynthetic process	1.80E-03
55	GO:0045038: protein import into chloroplast thylakoid membrane	1.80E-03
56	GO:0006461: protein complex assembly	1.80E-03
57	GO:0016132: brassinosteroid biosynthetic process	2.01E-03
58	GO:0009913: epidermal cell differentiation	2.21E-03
59	GO:0018258: protein O-linked glycosylation via hydroxyproline	2.21E-03
60	GO:0000741: karyogamy	2.21E-03
61	GO:0035435: phosphate ion transmembrane transport	2.21E-03
62	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	2.21E-03
63	GO:0010337: regulation of salicylic acid metabolic process	2.21E-03
64	GO:0006596: polyamine biosynthetic process	2.21E-03
65	GO:0006561: proline biosynthetic process	2.21E-03
66	GO:0048759: xylem vessel member cell differentiation	2.21E-03
67	GO:0010405: arabinogalactan protein metabolic process	2.21E-03
68	GO:0006694: steroid biosynthetic process	2.66E-03
69	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	2.66E-03
70	GO:0016042: lipid catabolic process	2.91E-03
71	GO:0009409: response to cold	3.11E-03
72	GO:0050829: defense response to Gram-negative bacterium	3.13E-03
73	GO:1900057: positive regulation of leaf senescence	3.13E-03
74	GO:0010444: guard mother cell differentiation	3.13E-03
75	GO:0009395: phospholipid catabolic process	3.13E-03
76	GO:0030497: fatty acid elongation	3.13E-03
77	GO:0008610: lipid biosynthetic process	3.63E-03
78	GO:0030091: protein repair	3.63E-03
79	GO:0046620: regulation of organ growth	3.63E-03
80	GO:0009704: de-etiolation	3.63E-03
81	GO:2000070: regulation of response to water deprivation	3.63E-03
82	GO:0031540: regulation of anthocyanin biosynthetic process	3.63E-03
83	GO:0055075: potassium ion homeostasis	3.63E-03
84	GO:0007155: cell adhesion	3.63E-03
85	GO:0007623: circadian rhythm	3.65E-03
86	GO:0030244: cellulose biosynthetic process	3.76E-03
87	GO:0018298: protein-chromophore linkage	3.76E-03
88	GO:0000160: phosphorelay signal transduction system	3.95E-03
89	GO:0007186: G-protein coupled receptor signaling pathway	4.15E-03
90	GO:0009657: plastid organization	4.15E-03
91	GO:0032544: plastid translation	4.15E-03
92	GO:0009808: lignin metabolic process	4.15E-03
93	GO:0015996: chlorophyll catabolic process	4.15E-03
94	GO:0009834: plant-type secondary cell wall biogenesis	4.15E-03
95	GO:0009827: plant-type cell wall modification	4.15E-03
96	GO:0090333: regulation of stomatal closure	4.70E-03
97	GO:0010205: photoinhibition	5.27E-03
98	GO:0009638: phototropism	5.27E-03
99	GO:0019538: protein metabolic process	5.86E-03
100	GO:0006032: chitin catabolic process	5.86E-03
101	GO:0009688: abscisic acid biosynthetic process	5.86E-03
102	GO:0009926: auxin polar transport	6.13E-03
103	GO:0009750: response to fructose	6.48E-03
104	GO:0016024: CDP-diacylglycerol biosynthetic process	7.12E-03
105	GO:0015706: nitrate transport	7.12E-03
106	GO:0045037: protein import into chloroplast stroma	7.12E-03
107	GO:0010229: inflorescence development	7.78E-03
108	GO:0009725: response to hormone	7.78E-03
109	GO:0009736: cytokinin-activated signaling pathway	8.27E-03
110	GO:0010207: photosystem II assembly	8.47E-03
111	GO:0048467: gynoecium development	8.47E-03
112	GO:0009825: multidimensional cell growth	9.17E-03
113	GO:0071732: cellular response to nitric oxide	9.17E-03
114	GO:0010053: root epidermal cell differentiation	9.17E-03
115	GO:0009225: nucleotide-sugar metabolic process	9.17E-03
116	GO:0006636: unsaturated fatty acid biosynthetic process	9.90E-03
117	GO:0042023: DNA endoreduplication	9.90E-03
118	GO:0055085: transmembrane transport	1.04E-02
119	GO:0005992: trehalose biosynthetic process	1.06E-02
120	GO:0006487: protein N-linked glycosylation	1.06E-02
121	GO:0007017: microtubule-based process	1.14E-02
122	GO:0009768: photosynthesis, light harvesting in photosystem I	1.14E-02
123	GO:0006869: lipid transport	1.18E-02
124	GO:0031408: oxylipin biosynthetic process	1.22E-02
125	GO:0051726: regulation of cell cycle	1.25E-02
126	GO:0030245: cellulose catabolic process	1.30E-02
127	GO:0071369: cellular response to ethylene stimulus	1.38E-02
128	GO:0019722: calcium-mediated signaling	1.47E-02
129	GO:0042127: regulation of cell proliferation	1.47E-02
130	GO:0010087: phloem or xylem histogenesis	1.64E-02
131	GO:0045489: pectin biosynthetic process	1.73E-02
132	GO:0010197: polar nucleus fusion	1.73E-02
133	GO:0009741: response to brassinosteroid	1.73E-02
134	GO:0009651: response to salt stress	1.82E-02
135	GO:0002229: defense response to oomycetes	2.01E-02
136	GO:0071281: cellular response to iron ion	2.21E-02
137	GO:1901657: glycosyl compound metabolic process	2.21E-02
138	GO:0010252: auxin homeostasis	2.30E-02
139	GO:0007267: cell-cell signaling	2.41E-02
140	GO:0010027: thylakoid membrane organization	2.61E-02
141	GO:0009817: defense response to fungus, incompatible interaction	3.16E-02
142	GO:0009407: toxin catabolic process	3.38E-02
143	GO:0010218: response to far red light	3.38E-02
144	GO:0010119: regulation of stomatal movement	3.50E-02
145	GO:0007049: cell cycle	3.53E-02
146	GO:0009637: response to blue light	3.74E-02
147	GO:0005975: carbohydrate metabolic process	3.87E-02
148	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.05E-02
149	GO:0006839: mitochondrial transport	4.10E-02
150	GO:0008283: cell proliferation	4.47E-02
151	GO:0009640: photomorphogenesis	4.47E-02
152	GO:0010114: response to red light	4.47E-02
153	GO:0009744: response to sucrose	4.47E-02
154	GO:0055114: oxidation-reduction process	4.59E-02
155	GO:0008643: carbohydrate transport	4.73E-02
156	GO:0009644: response to high light intensity	4.73E-02
157	GO:0009636: response to toxic substance	4.86E-02
158	GO:0006855: drug transmembrane transport	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0010301: xanthoxin dehydrogenase activity	0.00E+00
2	GO:0010487: thermospermine synthase activity	0.00E+00
3	GO:0052667: phosphomethylethanolamine N-methyltransferase activity	0.00E+00
4	GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity	0.00E+00
5	GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity	0.00E+00
6	GO:0019146: arabinose-5-phosphate isomerase activity	0.00E+00
7	GO:0050614: delta24-sterol reductase activity	0.00E+00
8	GO:0046577: long-chain-alcohol oxidase activity	0.00E+00
9	GO:0003999: adenine phosphoribosyltransferase activity	1.66E-05
10	GO:0004506: squalene monooxygenase activity	3.05E-05
11	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	4.03E-05
12	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	4.03E-05
13	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	4.03E-05
14	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.65E-04
15	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.85E-04
16	GO:0015121: phosphoenolpyruvate:phosphate antiporter activity	2.04E-04
17	GO:0008568: microtubule-severing ATPase activity	2.04E-04
18	GO:0019210: kinase inhibitor activity	2.04E-04
19	GO:0016768: spermine synthase activity	2.04E-04
20	GO:0004328: formamidase activity	2.04E-04
21	GO:0000248: C-5 sterol desaturase activity	2.04E-04
22	GO:0000170: sphingosine hydroxylase activity	2.04E-04
23	GO:0090422: thiamine pyrophosphate transporter activity	2.04E-04
24	GO:0015250: water channel activity	3.07E-04
25	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.81E-04
26	GO:0052689: carboxylic ester hydrolase activity	3.89E-04
27	GO:0042284: sphingolipid delta-4 desaturase activity	4.57E-04
28	GO:0000234: phosphoethanolamine N-methyltransferase activity	4.57E-04
29	GO:0003938: IMP dehydrogenase activity	4.57E-04
30	GO:0004871: signal transducer activity	4.89E-04
31	GO:0050734: hydroxycinnamoyltransferase activity	7.44E-04
32	GO:0005528: FK506 binding	8.38E-04
33	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	1.06E-03
34	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	1.06E-03
35	GO:0004550: nucleoside diphosphate kinase activity	1.06E-03
36	GO:0001872: (1->3)-beta-D-glucan binding	1.06E-03
37	GO:0016788: hydrolase activity, acting on ester bonds	1.25E-03
38	GO:0052793: pectin acetylesterase activity	1.41E-03
39	GO:0050378: UDP-glucuronate 4-epimerase activity	1.41E-03
40	GO:0004392: heme oxygenase (decyclizing) activity	1.41E-03
41	GO:0015120: phosphoglycerate transmembrane transporter activity	1.41E-03
42	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.41E-03
43	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	1.41E-03
44	GO:0050660: flavin adenine dinucleotide binding	1.51E-03
45	GO:0009922: fatty acid elongase activity	1.80E-03
46	GO:0016746: transferase activity, transferring acyl groups	1.89E-03
47	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	2.21E-03
48	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	2.21E-03
49	GO:1990714: hydroxyproline O-galactosyltransferase activity	2.21E-03
50	GO:0004629: phospholipase C activity	2.21E-03
51	GO:0000156: phosphorelay response regulator activity	2.28E-03
52	GO:0051753: mannan synthase activity	2.66E-03
53	GO:0004435: phosphatidylinositol phospholipase C activity	2.66E-03
54	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	2.66E-03
55	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	2.66E-03
56	GO:0016168: chlorophyll binding	3.05E-03
57	GO:0030247: polysaccharide binding	3.40E-03
58	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	4.15E-03
59	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	4.15E-03
60	GO:0015112: nitrate transmembrane transporter activity	5.27E-03
61	GO:0004805: trehalose-phosphatase activity	5.86E-03
62	GO:0004568: chitinase activity	5.86E-03
63	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	7.16E-03
64	GO:0005215: transporter activity	7.30E-03
65	GO:0004565: beta-galactosidase activity	7.78E-03
66	GO:0008081: phosphoric diester hydrolase activity	7.78E-03
67	GO:0004022: alcohol dehydrogenase (NAD) activity	7.78E-03
68	GO:0004089: carbonate dehydratase activity	7.78E-03
69	GO:0015114: phosphate ion transmembrane transporter activity	7.78E-03
70	GO:0008266: poly(U) RNA binding	8.47E-03
71	GO:0008146: sulfotransferase activity	9.17E-03
72	GO:0031409: pigment binding	9.90E-03
73	GO:0043424: protein histidine kinase binding	1.14E-02
74	GO:0030570: pectate lyase activity	1.38E-02
75	GO:0008810: cellulase activity	1.38E-02
76	GO:0022891: substrate-specific transmembrane transporter activity	1.38E-02
77	GO:0008514: organic anion transmembrane transporter activity	1.47E-02
78	GO:0050662: coenzyme binding	1.82E-02
79	GO:0019901: protein kinase binding	1.92E-02
80	GO:0004872: receptor activity	1.92E-02
81	GO:0015297: antiporter activity	1.95E-02
82	GO:0048038: quinone binding	2.01E-02
83	GO:0016791: phosphatase activity	2.30E-02
84	GO:0016759: cellulose synthase activity	2.30E-02
85	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.41E-02
86	GO:0005200: structural constituent of cytoskeleton	2.41E-02
87	GO:0003824: catalytic activity	2.41E-02
88	GO:0016413: O-acetyltransferase activity	2.51E-02
89	GO:0008375: acetylglucosaminyltransferase activity	2.83E-02
90	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.83E-02
91	GO:0004683: calmodulin-dependent protein kinase activity	2.94E-02
92	GO:0102483: scopolin beta-glucosidase activity	2.94E-02
93	GO:0016491: oxidoreductase activity	3.15E-02
94	GO:0015238: drug transmembrane transporter activity	3.27E-02
95	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.50E-02
96	GO:0003993: acid phosphatase activity	3.86E-02
97	GO:0008422: beta-glucosidase activity	3.98E-02
98	GO:0004364: glutathione transferase activity	4.35E-02
99	GO:0015293: symporter activity	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0010240: plastid pyruvate dehydrogenase complex	0.00E+00
2	GO:0009535: chloroplast thylakoid membrane	2.38E-07
3	GO:0048046: apoplast	3.33E-06
4	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	6.20E-06
5	GO:0009543: chloroplast thylakoid lumen	4.27E-05
6	GO:0016021: integral component of membrane	5.71E-05
7	GO:0009579: thylakoid	1.28E-04
8	GO:0005886: plasma membrane	1.74E-04
9	GO:0030095: chloroplast photosystem II	6.10E-04
10	GO:0009528: plastid inner membrane	7.44E-04
11	GO:0031225: anchored component of membrane	1.02E-03
12	GO:0015630: microtubule cytoskeleton	1.06E-03
13	GO:0005576: extracellular region	1.21E-03
14	GO:0009527: plastid outer membrane	1.41E-03
15	GO:0031969: chloroplast membrane	1.68E-03
16	GO:0009523: photosystem II	1.88E-03
17	GO:0009534: chloroplast thylakoid	2.48E-03
18	GO:0010319: stromule	2.58E-03
19	GO:0009533: chloroplast stromal thylakoid	3.13E-03
20	GO:0009507: chloroplast	3.51E-03
21	GO:0008180: COP9 signalosome	4.70E-03
22	GO:0046658: anchored component of plasma membrane	5.21E-03
23	GO:0030076: light-harvesting complex	9.17E-03
24	GO:0005618: cell wall	9.32E-03
25	GO:0005758: mitochondrial intermembrane space	1.06E-02
26	GO:0042651: thylakoid membrane	1.14E-02
27	GO:0009654: photosystem II oxygen evolving complex	1.14E-02
28	GO:0009532: plastid stroma	1.22E-02
29	GO:0005783: endoplasmic reticulum	1.26E-02
30	GO:0005789: endoplasmic reticulum membrane	1.28E-02
31	GO:0009941: chloroplast envelope	1.34E-02
32	GO:0010287: plastoglobule	1.40E-02
33	GO:0009522: photosystem I	1.82E-02
34	GO:0019898: extrinsic component of membrane	1.92E-02
35	GO:0005887: integral component of plasma membrane	2.02E-02
36	GO:0032580: Golgi cisterna membrane	2.30E-02
37	GO:0009707: chloroplast outer membrane	3.16E-02
38	GO:0019005: SCF ubiquitin ligase complex	3.16E-02
39	GO:0031977: thylakoid lumen	4.22E-02
40	GO:0005794: Golgi apparatus	4.84E-02