Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G26550

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006399: tRNA metabolic process0.00E+00
2GO:0006066: alcohol metabolic process0.00E+00
3GO:0090071: negative regulation of ribosome biogenesis0.00E+00
4GO:0033494: ferulate metabolic process0.00E+00
5GO:0016553: base conversion or substitution editing0.00E+00
6GO:0061635: regulation of protein complex stability0.00E+00
7GO:0015805: S-adenosyl-L-methionine transport0.00E+00
8GO:0042821: pyridoxal biosynthetic process0.00E+00
9GO:0042820: vitamin B6 catabolic process0.00E+00
10GO:0042493: response to drug0.00E+00
11GO:0015979: photosynthesis1.04E-08
12GO:0009773: photosynthetic electron transport in photosystem I2.37E-08
13GO:0010027: thylakoid membrane organization2.77E-07
14GO:0009735: response to cytokinin3.89E-06
15GO:0009658: chloroplast organization4.01E-06
16GO:0090391: granum assembly2.24E-05
17GO:0042335: cuticle development3.05E-05
18GO:0042254: ribosome biogenesis3.83E-05
19GO:0010207: photosystem II assembly1.10E-04
20GO:0015995: chlorophyll biosynthetic process1.45E-04
21GO:0042549: photosystem II stabilization1.95E-04
22GO:0006412: translation3.11E-04
23GO:0010196: nonphotochemical quenching3.40E-04
24GO:0071588: hydrogen peroxide mediated signaling pathway3.78E-04
25GO:0009443: pyridoxal 5'-phosphate salvage3.78E-04
26GO:0043489: RNA stabilization3.78E-04
27GO:0046520: sphingoid biosynthetic process3.78E-04
28GO:1904966: positive regulation of vitamin E biosynthetic process3.78E-04
29GO:0071277: cellular response to calcium ion3.78E-04
30GO:1904964: positive regulation of phytol biosynthetic process3.78E-04
31GO:0042371: vitamin K biosynthetic process3.78E-04
32GO:0032544: plastid translation5.22E-04
33GO:0010205: photoinhibition7.38E-04
34GO:0016042: lipid catabolic process7.77E-04
35GO:0010115: regulation of abscisic acid biosynthetic process8.22E-04
36GO:1902326: positive regulation of chlorophyll biosynthetic process8.22E-04
37GO:0034755: iron ion transmembrane transport8.22E-04
38GO:0001736: establishment of planar polarity8.22E-04
39GO:0000038: very long-chain fatty acid metabolic process9.90E-04
40GO:0016024: CDP-diacylglycerol biosynthetic process1.13E-03
41GO:0006006: glucose metabolic process1.28E-03
42GO:0015714: phosphoenolpyruvate transport1.33E-03
43GO:0006954: inflammatory response1.33E-03
44GO:0006696: ergosterol biosynthetic process1.33E-03
45GO:0018298: protein-chromophore linkage1.34E-03
46GO:0010143: cutin biosynthetic process1.44E-03
47GO:0055114: oxidation-reduction process1.56E-03
48GO:0006636: unsaturated fatty acid biosynthetic process1.80E-03
49GO:0009637: response to blue light1.81E-03
50GO:0071484: cellular response to light intensity1.92E-03
51GO:0009152: purine ribonucleotide biosynthetic process1.92E-03
52GO:0046653: tetrahydrofolate metabolic process1.92E-03
53GO:0009800: cinnamic acid biosynthetic process1.92E-03
54GO:0009650: UV protection1.92E-03
55GO:0080170: hydrogen peroxide transmembrane transport1.92E-03
56GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity1.92E-03
57GO:0046739: transport of virus in multicellular host1.92E-03
58GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis1.92E-03
59GO:2001141: regulation of RNA biosynthetic process1.92E-03
60GO:0009409: response to cold2.29E-03
61GO:0031408: oxylipin biosynthetic process2.42E-03
62GO:0009416: response to light stimulus2.56E-03
63GO:0015976: carbon utilization2.58E-03
64GO:0045727: positive regulation of translation2.58E-03
65GO:2000122: negative regulation of stomatal complex development2.58E-03
66GO:0030104: water homeostasis2.58E-03
67GO:0015994: chlorophyll metabolic process2.58E-03
68GO:0031122: cytoplasmic microtubule organization2.58E-03
69GO:0015713: phosphoglycerate transport2.58E-03
70GO:0010037: response to carbon dioxide2.58E-03
71GO:0006869: lipid transport2.60E-03
72GO:0006810: transport2.78E-03
73GO:0009831: plant-type cell wall modification involved in multidimensional cell growth2.89E-03
74GO:0009306: protein secretion3.14E-03
75GO:0031365: N-terminal protein amino acid modification3.30E-03
76GO:0006461: protein complex assembly3.30E-03
77GO:0080110: sporopollenin biosynthetic process3.30E-03
78GO:0030308: negative regulation of cell growth3.30E-03
79GO:0006564: L-serine biosynthetic process3.30E-03
80GO:0010236: plastoquinone biosynthetic process3.30E-03
81GO:0071555: cell wall organization3.42E-03
82GO:0000413: protein peptidyl-prolyl isomerization3.68E-03
83GO:0048759: xylem vessel member cell differentiation4.08E-03
84GO:0006751: glutathione catabolic process4.08E-03
85GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway4.08E-03
86GO:0000470: maturation of LSU-rRNA4.08E-03
87GO:0009913: epidermal cell differentiation4.08E-03
88GO:0006655: phosphatidylglycerol biosynthetic process4.08E-03
89GO:0010190: cytochrome b6f complex assembly4.08E-03
90GO:0006596: polyamine biosynthetic process4.08E-03
91GO:0006559: L-phenylalanine catabolic process4.08E-03
92GO:0006561: proline biosynthetic process4.08E-03
93GO:0009826: unidimensional cell growth4.53E-03
94GO:0010019: chloroplast-nucleus signaling pathway4.92E-03
95GO:0042372: phylloquinone biosynthetic process4.92E-03
96GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)4.92E-03
97GO:0017148: negative regulation of translation4.92E-03
98GO:0006694: steroid biosynthetic process4.92E-03
99GO:0010189: vitamin E biosynthetic process4.92E-03
100GO:0009395: phospholipid catabolic process5.81E-03
101GO:0009772: photosynthetic electron transport in photosystem II5.81E-03
102GO:0030497: fatty acid elongation5.81E-03
103GO:1900057: positive regulation of leaf senescence5.81E-03
104GO:0010444: guard mother cell differentiation5.81E-03
105GO:0006400: tRNA modification5.81E-03
106GO:0009828: plant-type cell wall loosening5.94E-03
107GO:0031540: regulation of anthocyanin biosynthetic process6.75E-03
108GO:0030091: protein repair6.75E-03
109GO:0008610: lipid biosynthetic process6.75E-03
110GO:0006605: protein targeting6.75E-03
111GO:0042255: ribosome assembly6.75E-03
112GO:0006353: DNA-templated transcription, termination6.75E-03
113GO:0009704: de-etiolation6.75E-03
114GO:0009808: lignin metabolic process7.75E-03
115GO:0071482: cellular response to light stimulus7.75E-03
116GO:0010497: plasmodesmata-mediated intercellular transport7.75E-03
117GO:0009657: plastid organization7.75E-03
118GO:0010411: xyloglucan metabolic process8.36E-03
119GO:0009051: pentose-phosphate shunt, oxidative branch8.79E-03
120GO:0010206: photosystem II repair8.79E-03
121GO:0090333: regulation of stomatal closure8.79E-03
122GO:0006633: fatty acid biosynthetic process1.02E-02
123GO:0009631: cold acclimation1.07E-02
124GO:0048829: root cap development1.10E-02
125GO:0006949: syncytium formation1.10E-02
126GO:0019538: protein metabolic process1.10E-02
127GO:0009688: abscisic acid biosynthetic process1.10E-02
128GO:0045490: pectin catabolic process1.15E-02
129GO:0048765: root hair cell differentiation1.22E-02
130GO:0009073: aromatic amino acid family biosynthetic process1.22E-02
131GO:0006879: cellular iron ion homeostasis1.22E-02
132GO:0006352: DNA-templated transcription, initiation1.22E-02
133GO:0009750: response to fructose1.22E-02
134GO:0018119: peptidyl-cysteine S-nitrosylation1.22E-02
135GO:0030001: metal ion transport1.34E-02
136GO:0006839: mitochondrial transport1.34E-02
137GO:0010229: inflorescence development1.47E-02
138GO:0009718: anthocyanin-containing compound biosynthetic process1.47E-02
139GO:0009725: response to hormone1.47E-02
140GO:0010628: positive regulation of gene expression1.47E-02
141GO:0010114: response to red light1.52E-02
142GO:0009926: auxin polar transport1.52E-02
143GO:0042546: cell wall biogenesis1.58E-02
144GO:0048467: gynoecium development1.60E-02
145GO:0019253: reductive pentose-phosphate cycle1.60E-02
146GO:0071732: cellular response to nitric oxide1.74E-02
147GO:0010025: wax biosynthetic process1.88E-02
148GO:0042023: DNA endoreduplication1.88E-02
149GO:0009664: plant-type cell wall organization1.91E-02
150GO:0006487: protein N-linked glycosylation2.02E-02
151GO:0000027: ribosomal large subunit assembly2.02E-02
152GO:0009695: jasmonic acid biosynthetic process2.17E-02
153GO:0007017: microtubule-based process2.17E-02
154GO:0009768: photosynthesis, light harvesting in photosystem I2.17E-02
155GO:0048511: rhythmic process2.32E-02
156GO:0003333: amino acid transmembrane transport2.32E-02
157GO:0016998: cell wall macromolecule catabolic process2.32E-02
158GO:0030245: cellulose catabolic process2.48E-02
159GO:0080167: response to karrikin2.63E-02
160GO:0009411: response to UV2.64E-02
161GO:0071369: cellular response to ethylene stimulus2.64E-02
162GO:0010584: pollen exine formation2.80E-02
163GO:0042127: regulation of cell proliferation2.80E-02
164GO:0019722: calcium-mediated signaling2.80E-02
165GO:0042742: defense response to bacterium2.92E-02
166GO:0010087: phloem or xylem histogenesis3.13E-02
167GO:0080022: primary root development3.13E-02
168GO:0008033: tRNA processing3.13E-02
169GO:0034220: ion transmembrane transport3.13E-02
170GO:0010182: sugar mediated signaling pathway3.30E-02
171GO:0009958: positive gravitropism3.30E-02
172GO:0045893: positive regulation of transcription, DNA-templated3.47E-02
173GO:0042752: regulation of circadian rhythm3.48E-02
174GO:0015986: ATP synthesis coupled proton transport3.48E-02
175GO:0016132: brassinosteroid biosynthetic process3.83E-02
176GO:0048510: regulation of timing of transition from vegetative to reproductive phase3.83E-02
177GO:0000302: response to reactive oxygen species3.83E-02
178GO:0032502: developmental process4.02E-02
179GO:0032259: methylation4.04E-02
180GO:0042744: hydrogen peroxide catabolic process4.16E-02
181GO:0071281: cellular response to iron ion4.21E-02
182GO:0010252: auxin homeostasis4.40E-02
183GO:0007267: cell-cell signaling4.59E-02
184GO:0009793: embryo development ending in seed dormancy4.91E-02
RankGO TermAdjusted P value
1GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity0.00E+00
2GO:0102193: protein-ribulosamine 3-kinase activity0.00E+00
3GO:0050614: delta24-sterol reductase activity0.00E+00
4GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity0.00E+00
5GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
6GO:0046577: long-chain-alcohol oxidase activity0.00E+00
7GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity0.00E+00
8GO:0010301: xanthoxin dehydrogenase activity0.00E+00
9GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity0.00E+00
10GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity0.00E+00
11GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity0.00E+00
12GO:0010487: thermospermine synthase activity0.00E+00
13GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
14GO:0019843: rRNA binding2.55E-11
15GO:0005528: FK506 binding3.66E-09
16GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.12E-08
17GO:0016788: hydrolase activity, acting on ester bonds3.73E-07
18GO:0052689: carboxylic ester hydrolase activity1.24E-05
19GO:0003735: structural constituent of ribosome7.15E-05
20GO:0030570: pectate lyase activity3.01E-04
21GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity3.78E-04
22GO:0000170: sphingosine hydroxylase activity3.78E-04
23GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity3.78E-04
24GO:0030794: (S)-coclaurine-N-methyltransferase activity3.78E-04
25GO:0008568: microtubule-severing ATPase activity3.78E-04
26GO:0015121: phosphoenolpyruvate:phosphate antiporter activity3.78E-04
27GO:0004321: fatty-acyl-CoA synthase activity3.78E-04
28GO:0016768: spermine synthase activity3.78E-04
29GO:0045485: omega-6 fatty acid desaturase activity3.78E-04
30GO:0004033: aldo-keto reductase (NADP) activity4.26E-04
31GO:0047746: chlorophyllase activity8.22E-04
32GO:0003839: gamma-glutamylcyclotransferase activity8.22E-04
33GO:0004617: phosphoglycerate dehydrogenase activity8.22E-04
34GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity8.22E-04
35GO:0016630: protochlorophyllide reductase activity8.22E-04
36GO:0042284: sphingolipid delta-4 desaturase activity8.22E-04
37GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity8.22E-04
38GO:0016168: chlorophyll binding1.03E-03
39GO:0016746: transferase activity, transferring acyl groups1.12E-03
40GO:0016742: hydroxymethyl-, formyl- and related transferase activity1.33E-03
41GO:0070402: NADPH binding1.33E-03
42GO:0008864: formyltetrahydrofolate deformylase activity1.33E-03
43GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor1.33E-03
44GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity1.33E-03
45GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity1.33E-03
46GO:0050734: hydroxycinnamoyltransferase activity1.33E-03
47GO:0045548: phenylalanine ammonia-lyase activity1.33E-03
48GO:0008266: poly(U) RNA binding1.44E-03
49GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.80E-03
50GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.80E-03
51GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.80E-03
52GO:0043023: ribosomal large subunit binding1.92E-03
53GO:0001872: (1->3)-beta-D-glucan binding1.92E-03
54GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity1.92E-03
55GO:0016851: magnesium chelatase activity1.92E-03
56GO:0016491: oxidoreductase activity2.14E-03
57GO:0015120: phosphoglycerate transmembrane transporter activity2.58E-03
58GO:0001053: plastid sigma factor activity2.58E-03
59GO:0010011: auxin binding2.58E-03
60GO:0004345: glucose-6-phosphate dehydrogenase activity2.58E-03
61GO:0004045: aminoacyl-tRNA hydrolase activity2.58E-03
62GO:0016987: sigma factor activity2.58E-03
63GO:0010328: auxin influx transmembrane transporter activity2.58E-03
64GO:0052793: pectin acetylesterase activity2.58E-03
65GO:0043495: protein anchor2.58E-03
66GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity2.58E-03
67GO:0022891: substrate-specific transmembrane transporter activity2.89E-03
68GO:0009922: fatty acid elongase activity3.30E-03
69GO:0003959: NADPH dehydrogenase activity3.30E-03
70GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity4.08E-03
71GO:0016208: AMP binding4.08E-03
72GO:0004130: cytochrome-c peroxidase activity4.08E-03
73GO:0004366: glycerol-3-phosphate O-acyltransferase activity4.08E-03
74GO:0016688: L-ascorbate peroxidase activity4.08E-03
75GO:0050662: coenzyme binding4.26E-03
76GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds4.43E-03
77GO:0016762: xyloglucan:xyloglucosyl transferase activity4.89E-03
78GO:0051920: peroxiredoxin activity4.92E-03
79GO:0033743: peptide-methionine (R)-S-oxide reductase activity4.92E-03
80GO:0051753: mannan synthase activity4.92E-03
81GO:0004723: calcium-dependent protein serine/threonine phosphatase activity4.92E-03
82GO:0008289: lipid binding5.71E-03
83GO:0008235: metalloexopeptidase activity5.81E-03
84GO:0019899: enzyme binding5.81E-03
85GO:0030674: protein binding, bridging6.75E-03
86GO:0016209: antioxidant activity6.75E-03
87GO:0052747: sinapyl alcohol dehydrogenase activity6.75E-03
88GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water7.75E-03
89GO:0016798: hydrolase activity, acting on glycosyl bonds8.36E-03
90GO:0016829: lyase activity8.44E-03
91GO:0016207: 4-coumarate-CoA ligase activity8.79E-03
92GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity9.27E-03
93GO:0005381: iron ion transmembrane transporter activity9.89E-03
94GO:0047617: acyl-CoA hydrolase activity9.89E-03
95GO:0004177: aminopeptidase activity1.22E-02
96GO:0003993: acid phosphatase activity1.23E-02
97GO:0050661: NADP binding1.34E-02
98GO:0045551: cinnamyl-alcohol dehydrogenase activity1.34E-02
99GO:0004089: carbonate dehydratase activity1.47E-02
100GO:0004565: beta-galactosidase activity1.47E-02
101GO:0004022: alcohol dehydrogenase (NAD) activity1.47E-02
102GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.60E-02
103GO:0015293: symporter activity1.71E-02
104GO:0008146: sulfotransferase activity1.74E-02
105GO:0051287: NAD binding1.85E-02
106GO:0031409: pigment binding1.88E-02
107GO:0008168: methyltransferase activity1.91E-02
108GO:0003690: double-stranded DNA binding2.13E-02
109GO:0043424: protein histidine kinase binding2.17E-02
110GO:0008810: cellulase activity2.64E-02
111GO:0003727: single-stranded RNA binding2.80E-02
112GO:0008514: organic anion transmembrane transporter activity2.80E-02
113GO:0008080: N-acetyltransferase activity3.30E-02
114GO:0046933: proton-transporting ATP synthase activity, rotational mechanism3.30E-02
115GO:0003824: catalytic activity3.40E-02
116GO:0004871: signal transducer activity3.48E-02
117GO:0046872: metal ion binding3.51E-02
118GO:0004872: receptor activity3.66E-02
119GO:0016791: phosphatase activity4.40E-02
120GO:0005200: structural constituent of cytoskeleton4.59E-02
121GO:0009055: electron carrier activity4.64E-02
122GO:0016597: amino acid binding4.78E-02
123GO:0015250: water channel activity4.98E-02
RankGO TermAdjusted P value
1GO:0009515: granal stacked thylakoid0.00E+00
2GO:0044391: ribosomal subunit0.00E+00
3GO:0009507: chloroplast1.44E-38
4GO:0009535: chloroplast thylakoid membrane8.17E-27
5GO:0009941: chloroplast envelope7.85E-24
6GO:0009579: thylakoid2.16E-22
7GO:0009570: chloroplast stroma1.23E-17
8GO:0009543: chloroplast thylakoid lumen3.47E-17
9GO:0009534: chloroplast thylakoid7.19E-15
10GO:0031977: thylakoid lumen1.38E-10
11GO:0005840: ribosome5.87E-07
12GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)2.76E-05
13GO:0031969: chloroplast membrane6.73E-05
14GO:0048046: apoplast7.00E-05
15GO:0030095: chloroplast photosystem II1.10E-04
16GO:0016020: membrane2.42E-04
17GO:0005618: cell wall3.09E-04
18GO:0043674: columella3.78E-04
19GO:0009523: photosystem II5.52E-04
20GO:0010319: stromule8.30E-04
21GO:0046658: anchored component of plasma membrane8.39E-04
22GO:0010007: magnesium chelatase complex1.33E-03
23GO:0015630: microtubule cytoskeleton1.92E-03
24GO:0031225: anchored component of membrane1.93E-03
25GO:0009654: photosystem II oxygen evolving complex2.20E-03
26GO:0042651: thylakoid membrane2.20E-03
27GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)4.08E-03
28GO:0019898: extrinsic component of membrane4.57E-03
29GO:0009706: chloroplast inner membrane5.73E-03
30GO:0009986: cell surface5.81E-03
31GO:0009533: chloroplast stromal thylakoid5.81E-03
32GO:0042807: central vacuole5.81E-03
33GO:0030529: intracellular ribonucleoprotein complex7.09E-03
34GO:0010287: plastoglobule7.12E-03
35GO:0008180: COP9 signalosome8.79E-03
36GO:0016021: integral component of membrane1.02E-02
37GO:0009505: plant-type cell wall1.58E-02
38GO:0000312: plastid small ribosomal subunit1.60E-02
39GO:0030076: light-harvesting complex1.74E-02
40GO:0005576: extracellular region1.86E-02
41GO:0015935: small ribosomal subunit2.32E-02
42GO:0005886: plasma membrane2.65E-02
43GO:0005777: peroxisome3.47E-02
44GO:0009522: photosystem I3.48E-02
45GO:0009295: nucleoid4.59E-02
46GO:0005778: peroxisomal membrane4.59E-02
Gene type



Gene DE type