co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G24150

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042493: response to drug	0.00E+00
2	GO:0015739: sialic acid transport	0.00E+00
3	GO:0033494: ferulate metabolic process	0.00E+00
4	GO:0009773: photosynthetic electron transport in photosystem I	1.45E-07
5	GO:0015979: photosynthesis	4.14E-05
6	GO:0042371: vitamin K biosynthetic process	1.82E-04
7	GO:1902458: positive regulation of stomatal opening	1.82E-04
8	GO:0071588: hydrogen peroxide mediated signaling pathway	1.82E-04
9	GO:0010729: positive regulation of hydrogen peroxide biosynthetic process	1.82E-04
10	GO:0046520: sphingoid biosynthetic process	1.82E-04
11	GO:0071277: cellular response to calcium ion	1.82E-04
12	GO:0010027: thylakoid membrane organization	2.47E-04
13	GO:0010205: photoinhibition	2.59E-04
14	GO:1903426: regulation of reactive oxygen species biosynthetic process	4.10E-04
15	GO:0010024: phytochromobilin biosynthetic process	4.10E-04
16	GO:0010115: regulation of abscisic acid biosynthetic process	4.10E-04
17	GO:0010143: cutin biosynthetic process	5.21E-04
18	GO:0010207: photosystem II assembly	5.21E-04
19	GO:0006833: water transport	6.48E-04
20	GO:0006636: unsaturated fatty acid biosynthetic process	6.48E-04
21	GO:0015714: phosphoenolpyruvate transport	6.69E-04
22	GO:0006788: heme oxidation	6.69E-04
23	GO:0006518: peptide metabolic process	6.69E-04
24	GO:0015840: urea transport	6.69E-04
25	GO:0006810: transport	7.53E-04
26	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	9.55E-04
27	GO:0006166: purine ribonucleoside salvage	9.55E-04
28	GO:0071484: cellular response to light intensity	9.55E-04
29	GO:0080170: hydrogen peroxide transmembrane transport	9.55E-04
30	GO:0009650: UV protection	9.55E-04
31	GO:0006168: adenine salvage	9.55E-04
32	GO:0042254: ribosome biogenesis	9.77E-04
33	GO:0009306: protein secretion	1.11E-03
34	GO:0071555: cell wall organization	1.23E-03
35	GO:0010037: response to carbon dioxide	1.27E-03
36	GO:0009956: radial pattern formation	1.27E-03
37	GO:0015976: carbon utilization	1.27E-03
38	GO:0006183: GTP biosynthetic process	1.27E-03
39	GO:0045727: positive regulation of translation	1.27E-03
40	GO:2000122: negative regulation of stomatal complex development	1.27E-03
41	GO:0015713: phosphoglycerate transport	1.27E-03
42	GO:0010182: sugar mediated signaling pathway	1.39E-03
43	GO:0044209: AMP salvage	1.61E-03
44	GO:0045038: protein import into chloroplast thylakoid membrane	1.61E-03
45	GO:0006561: proline biosynthetic process	1.98E-03
46	GO:0010405: arabinogalactan protein metabolic process	1.98E-03
47	GO:0009913: epidermal cell differentiation	1.98E-03
48	GO:0018258: protein O-linked glycosylation via hydroxyproline	1.98E-03
49	GO:0035435: phosphate ion transmembrane transport	1.98E-03
50	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	1.98E-03
51	GO:0010019: chloroplast-nucleus signaling pathway	2.38E-03
52	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	2.38E-03
53	GO:0006694: steroid biosynthetic process	2.38E-03
54	GO:0006633: fatty acid biosynthetic process	2.63E-03
55	GO:0009395: phospholipid catabolic process	2.80E-03
56	GO:0009772: photosynthetic electron transport in photosystem II	2.80E-03
57	GO:0010196: nonphotochemical quenching	2.80E-03
58	GO:1900057: positive regulation of leaf senescence	2.80E-03
59	GO:0010444: guard mother cell differentiation	2.80E-03
60	GO:0010411: xyloglucan metabolic process	2.89E-03
61	GO:0007623: circadian rhythm	2.96E-03
62	GO:2000070: regulation of response to water deprivation	3.24E-03
63	GO:0031540: regulation of anthocyanin biosynthetic process	3.24E-03
64	GO:0016559: peroxisome fission	3.24E-03
65	GO:0008610: lipid biosynthetic process	3.24E-03
66	GO:0030091: protein repair	3.24E-03
67	GO:0042255: ribosome assembly	3.24E-03
68	GO:0046620: regulation of organ growth	3.24E-03
69	GO:0006605: protein targeting	3.24E-03
70	GO:0009704: de-etiolation	3.24E-03
71	GO:0009808: lignin metabolic process	3.71E-03
72	GO:0015996: chlorophyll catabolic process	3.71E-03
73	GO:0007186: G-protein coupled receptor signaling pathway	3.71E-03
74	GO:0032544: plastid translation	3.71E-03
75	GO:0015780: nucleotide-sugar transport	4.20E-03
76	GO:0010206: photosystem II repair	4.20E-03
77	GO:0090333: regulation of stomatal closure	4.20E-03
78	GO:0009735: response to cytokinin	4.94E-03
79	GO:0009926: auxin polar transport	5.21E-03
80	GO:0009688: abscisic acid biosynthetic process	5.24E-03
81	GO:0042546: cell wall biogenesis	5.42E-03
82	GO:0008643: carbohydrate transport	5.63E-03
83	GO:0009416: response to light stimulus	5.66E-03
84	GO:0009750: response to fructose	5.79E-03
85	GO:0018119: peptidyl-cysteine S-nitrosylation	5.79E-03
86	GO:0000038: very long-chain fatty acid metabolic process	5.79E-03
87	GO:0016024: CDP-diacylglycerol biosynthetic process	6.35E-03
88	GO:0045037: protein import into chloroplast stroma	6.35E-03
89	GO:0010229: inflorescence development	6.94E-03
90	GO:0006006: glucose metabolic process	6.94E-03
91	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	7.07E-03
92	GO:0010540: basipetal auxin transport	7.55E-03
93	GO:0048467: gynoecium development	7.55E-03
94	GO:0010020: chloroplast fission	7.55E-03
95	GO:0009933: meristem structural organization	7.55E-03
96	GO:0019253: reductive pentose-phosphate cycle	7.55E-03
97	GO:0009825: multidimensional cell growth	8.18E-03
98	GO:0071732: cellular response to nitric oxide	8.18E-03
99	GO:0006096: glycolytic process	8.30E-03
100	GO:0010025: wax biosynthetic process	8.82E-03
101	GO:0042023: DNA endoreduplication	8.82E-03
102	GO:0005992: trehalose biosynthetic process	9.48E-03
103	GO:0006487: protein N-linked glycosylation	9.48E-03
104	GO:0000027: ribosomal large subunit assembly	9.48E-03
105	GO:0006869: lipid transport	9.58E-03
106	GO:0007017: microtubule-based process	1.02E-02
107	GO:0051726: regulation of cell cycle	1.06E-02
108	GO:0016042: lipid catabolic process	1.07E-02
109	GO:0016998: cell wall macromolecule catabolic process	1.09E-02
110	GO:0061077: chaperone-mediated protein folding	1.09E-02
111	GO:0031408: oxylipin biosynthetic process	1.09E-02
112	GO:0030245: cellulose catabolic process	1.16E-02
113	GO:0071369: cellular response to ethylene stimulus	1.23E-02
114	GO:0009411: response to UV	1.23E-02
115	GO:0042127: regulation of cell proliferation	1.31E-02
116	GO:0034220: ion transmembrane transport	1.46E-02
117	GO:0042335: cuticle development	1.46E-02
118	GO:0009741: response to brassinosteroid	1.54E-02
119	GO:0010305: leaf vascular tissue pattern formation	1.54E-02
120	GO:0015986: ATP synthesis coupled proton transport	1.62E-02
121	GO:0045490: pectin catabolic process	1.74E-02
122	GO:0016132: brassinosteroid biosynthetic process	1.79E-02
123	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.79E-02
124	GO:0002229: defense response to oomycetes	1.79E-02
125	GO:0000302: response to reactive oxygen species	1.79E-02
126	GO:0032502: developmental process	1.87E-02
127	GO:1901657: glycosyl compound metabolic process	1.96E-02
128	GO:0071281: cellular response to iron ion	1.96E-02
129	GO:0010252: auxin homeostasis	2.05E-02
130	GO:0009627: systemic acquired resistance	2.51E-02
131	GO:0042128: nitrate assimilation	2.51E-02
132	GO:0009409: response to cold	2.58E-02
133	GO:0009658: chloroplast organization	2.69E-02
134	GO:0009817: defense response to fungus, incompatible interaction	2.81E-02
135	GO:0018298: protein-chromophore linkage	2.81E-02
136	GO:0000160: phosphorelay signal transduction system	2.91E-02
137	GO:0055114: oxidation-reduction process	2.97E-02
138	GO:0007049: cell cycle	3.00E-02
139	GO:0009834: plant-type secondary cell wall biogenesis	3.01E-02
140	GO:0009407: toxin catabolic process	3.01E-02
141	GO:0005975: carbohydrate metabolic process	3.05E-02
142	GO:0055085: transmembrane transport	3.10E-02
143	GO:0010119: regulation of stomatal movement	3.11E-02
144	GO:0009631: cold acclimation	3.11E-02
145	GO:0080167: response to karrikin	3.33E-02
146	GO:0034599: cellular response to oxidative stress	3.43E-02
147	GO:0008283: cell proliferation	3.98E-02
148	GO:0009640: photomorphogenesis	3.98E-02
149	GO:0009644: response to high light intensity	4.21E-02
150	GO:0009636: response to toxic substance	4.32E-02
151	GO:0009965: leaf morphogenesis	4.32E-02
152	GO:0006855: drug transmembrane transport	4.44E-02
153	GO:0006364: rRNA processing	4.92E-02
154	GO:0009736: cytokinin-activated signaling pathway	4.92E-02

Rank	GO Term	Adjusted P value
1	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
2	GO:1990534: thermospermine oxidase activity	0.00E+00
3	GO:0019146: arabinose-5-phosphate isomerase activity	0.00E+00
4	GO:0050614: delta24-sterol reductase activity	0.00E+00
5	GO:0005456: CMP-N-acetylneuraminate transmembrane transporter activity	0.00E+00
6	GO:0010301: xanthoxin dehydrogenase activity	0.00E+00
7	GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity	0.00E+00
8	GO:0015136: sialic acid transmembrane transporter activity	0.00E+00
9	GO:0005528: FK506 binding	3.69E-05
10	GO:0000170: sphingosine hydroxylase activity	1.82E-04
11	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	1.82E-04
12	GO:0015121: phosphoenolpyruvate:phosphate antiporter activity	1.82E-04
13	GO:0045485: omega-6 fatty acid desaturase activity	1.82E-04
14	GO:0015200: methylammonium transmembrane transporter activity	1.82E-04
15	GO:0019210: kinase inhibitor activity	1.82E-04
16	GO:0052689: carboxylic ester hydrolase activity	2.85E-04
17	GO:0019843: rRNA binding	2.94E-04
18	GO:0003938: IMP dehydrogenase activity	4.10E-04
19	GO:0042284: sphingolipid delta-4 desaturase activity	4.10E-04
20	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	4.10E-04
21	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	5.29E-04
22	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	6.69E-04
23	GO:0050734: hydroxycinnamoyltransferase activity	6.69E-04
24	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	8.01E-04
25	GO:0001872: (1->3)-beta-D-glucan binding	9.55E-04
26	GO:0003999: adenine phosphoribosyltransferase activity	9.55E-04
27	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	9.55E-04
28	GO:0016788: hydrolase activity, acting on ester bonds	9.77E-04
29	GO:0030570: pectate lyase activity	1.02E-03
30	GO:0015204: urea transmembrane transporter activity	1.27E-03
31	GO:0015120: phosphoglycerate transmembrane transporter activity	1.27E-03
32	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.27E-03
33	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	1.27E-03
34	GO:0052793: pectin acetylesterase activity	1.27E-03
35	GO:0004392: heme oxygenase (decyclizing) activity	1.27E-03
36	GO:0004040: amidase activity	1.61E-03
37	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.71E-03
38	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	1.98E-03
39	GO:0008519: ammonium transmembrane transporter activity	1.98E-03
40	GO:1990714: hydroxyproline O-galactosyltransferase activity	1.98E-03
41	GO:0004130: cytochrome-c peroxidase activity	1.98E-03
42	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	1.98E-03
43	GO:0016688: L-ascorbate peroxidase activity	1.98E-03
44	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	2.38E-03
45	GO:0051753: mannan synthase activity	2.38E-03
46	GO:0015250: water channel activity	2.46E-03
47	GO:0005338: nucleotide-sugar transmembrane transporter activity	2.80E-03
48	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.89E-03
49	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.20E-03
50	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.53E-03
51	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	3.71E-03
52	GO:0004805: trehalose-phosphatase activity	5.24E-03
53	GO:0004089: carbonate dehydratase activity	6.94E-03
54	GO:0015114: phosphate ion transmembrane transporter activity	6.94E-03
55	GO:0004565: beta-galactosidase activity	6.94E-03
56	GO:0004022: alcohol dehydrogenase (NAD) activity	6.94E-03
57	GO:0003690: double-stranded DNA binding	7.26E-03
58	GO:0016491: oxidoreductase activity	7.42E-03
59	GO:0008266: poly(U) RNA binding	7.55E-03
60	GO:0008131: primary amine oxidase activity	7.55E-03
61	GO:0008146: sulfotransferase activity	8.18E-03
62	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	8.82E-03
63	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	8.82E-03
64	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	8.82E-03
65	GO:0004871: signal transducer activity	9.04E-03
66	GO:0016746: transferase activity, transferring acyl groups	1.03E-02
67	GO:0022891: substrate-specific transmembrane transporter activity	1.23E-02
68	GO:0008810: cellulase activity	1.23E-02
69	GO:0003727: single-stranded RNA binding	1.31E-02
70	GO:0008514: organic anion transmembrane transporter activity	1.31E-02
71	GO:0016829: lyase activity	1.36E-02
72	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	1.54E-02
73	GO:0050662: coenzyme binding	1.62E-02
74	GO:0015297: antiporter activity	1.66E-02
75	GO:0019901: protein kinase binding	1.70E-02
76	GO:0048038: quinone binding	1.79E-02
77	GO:0000156: phosphorelay response regulator activity	1.96E-02
78	GO:0016791: phosphatase activity	2.05E-02
79	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.14E-02
80	GO:0005200: structural constituent of cytoskeleton	2.14E-02
81	GO:0042802: identical protein binding	2.21E-02
82	GO:0016168: chlorophyll binding	2.42E-02
83	GO:0008375: acetylglucosaminyltransferase activity	2.51E-02
84	GO:0102483: scopolin beta-glucosidase activity	2.61E-02
85	GO:0030247: polysaccharide binding	2.61E-02
86	GO:0015238: drug transmembrane transporter activity	2.91E-02
87	GO:0004222: metalloendopeptidase activity	3.01E-02
88	GO:0030145: manganese ion binding	3.11E-02
89	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.11E-02
90	GO:0003993: acid phosphatase activity	3.43E-02
91	GO:0008422: beta-glucosidase activity	3.54E-02
92	GO:0050661: NADP binding	3.65E-02
93	GO:0004364: glutathione transferase activity	3.87E-02
94	GO:0005525: GTP binding	4.26E-02
95	GO:0015293: symporter activity	4.32E-02
96	GO:0003735: structural constituent of ribosome	4.51E-02
97	GO:0051287: NAD binding	4.56E-02
98	GO:0003924: GTPase activity	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0010240: plastid pyruvate dehydrogenase complex	0.00E+00
2	GO:0044391: ribosomal subunit	0.00E+00
3	GO:0009535: chloroplast thylakoid membrane	5.22E-14
4	GO:0009507: chloroplast	4.13E-11
5	GO:0009579: thylakoid	9.92E-08
6	GO:0009534: chloroplast thylakoid	1.04E-07
7	GO:0048046: apoplast	1.93E-07
8	GO:0009543: chloroplast thylakoid lumen	1.79E-06
9	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	4.68E-06
10	GO:0030095: chloroplast photosystem II	2.15E-05
11	GO:0009941: chloroplast envelope	2.69E-05
12	GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex	1.82E-04
13	GO:0010319: stromule	2.10E-04
14	GO:0005618: cell wall	2.35E-04
15	GO:0009570: chloroplast stroma	3.54E-04
16	GO:0009528: plastid inner membrane	6.69E-04
17	GO:0031225: anchored component of membrane	7.39E-04
18	GO:0009654: photosystem II oxygen evolving complex	7.90E-04
19	GO:0015630: microtubule cytoskeleton	9.55E-04
20	GO:0016021: integral component of membrane	1.12E-03
21	GO:0009527: plastid outer membrane	1.27E-03
22	GO:0019898: extrinsic component of membrane	1.60E-03
23	GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)	1.98E-03
24	GO:0005886: plasma membrane	2.25E-03
25	GO:0042807: central vacuole	2.80E-03
26	GO:0009707: chloroplast outer membrane	3.20E-03
27	GO:0000326: protein storage vacuole	3.71E-03
28	GO:0008180: COP9 signalosome	4.20E-03
29	GO:0046658: anchored component of plasma membrane	4.23E-03
30	GO:0031977: thylakoid lumen	4.80E-03
31	GO:0031969: chloroplast membrane	6.77E-03
32	GO:0031012: extracellular matrix	6.94E-03
33	GO:0016020: membrane	1.01E-02
34	GO:0042651: thylakoid membrane	1.02E-02
35	GO:0009532: plastid stroma	1.09E-02
36	GO:0010287: plastoglobule	1.19E-02
37	GO:0009523: photosystem II	1.70E-02
38	GO:0005840: ribosome	1.76E-02
39	GO:0005576: extracellular region	1.91E-02
40	GO:0005777: peroxisome	2.73E-02
41	GO:0019005: SCF ubiquitin ligase complex	2.81E-02
42	GO:0000502: proteasome complex	4.92E-02