GO Enrichment Analysis of Co-expressed Genes with
AT2G23340
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 2 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 3 | GO:1905499: trichome papilla formation | 0.00E+00 |
| 4 | GO:0071555: cell wall organization | 2.58E-06 |
| 5 | GO:0009443: pyridoxal 5'-phosphate salvage | 5.48E-05 |
| 6 | GO:0015979: photosynthesis | 1.22E-04 |
| 7 | GO:0044208: 'de novo' AMP biosynthetic process | 1.34E-04 |
| 8 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 1.34E-04 |
| 9 | GO:0008152: metabolic process | 2.24E-04 |
| 10 | GO:0006000: fructose metabolic process | 2.28E-04 |
| 11 | GO:0009062: fatty acid catabolic process | 2.28E-04 |
| 12 | GO:0071492: cellular response to UV-A | 2.28E-04 |
| 13 | GO:0090506: axillary shoot meristem initiation | 2.28E-04 |
| 14 | GO:0051639: actin filament network formation | 3.33E-04 |
| 15 | GO:0071486: cellular response to high light intensity | 4.45E-04 |
| 16 | GO:0051764: actin crosslink formation | 4.45E-04 |
| 17 | GO:0048359: mucilage metabolic process involved in seed coat development | 5.66E-04 |
| 18 | GO:0006665: sphingolipid metabolic process | 5.66E-04 |
| 19 | GO:0015995: chlorophyll biosynthetic process | 6.07E-04 |
| 20 | GO:0055114: oxidation-reduction process | 6.63E-04 |
| 21 | GO:0016554: cytidine to uridine editing | 6.92E-04 |
| 22 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 6.92E-04 |
| 23 | GO:0010067: procambium histogenesis | 8.25E-04 |
| 24 | GO:0009088: threonine biosynthetic process | 8.25E-04 |
| 25 | GO:0045454: cell redox homeostasis | 1.09E-03 |
| 26 | GO:0032544: plastid translation | 1.26E-03 |
| 27 | GO:0006002: fructose 6-phosphate metabolic process | 1.26E-03 |
| 28 | GO:0006189: 'de novo' IMP biosynthetic process | 1.41E-03 |
| 29 | GO:1900865: chloroplast RNA modification | 1.58E-03 |
| 30 | GO:0042761: very long-chain fatty acid biosynthetic process | 1.58E-03 |
| 31 | GO:0006949: syncytium formation | 1.75E-03 |
| 32 | GO:0010192: mucilage biosynthetic process | 1.75E-03 |
| 33 | GO:0009773: photosynthetic electron transport in photosystem I | 1.93E-03 |
| 34 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.93E-03 |
| 35 | GO:0006094: gluconeogenesis | 2.30E-03 |
| 36 | GO:0005986: sucrose biosynthetic process | 2.30E-03 |
| 37 | GO:0019253: reductive pentose-phosphate cycle | 2.49E-03 |
| 38 | GO:0010223: secondary shoot formation | 2.49E-03 |
| 39 | GO:0009735: response to cytokinin | 2.60E-03 |
| 40 | GO:0005985: sucrose metabolic process | 2.70E-03 |
| 41 | GO:0010025: wax biosynthetic process | 2.90E-03 |
| 42 | GO:0019762: glucosinolate catabolic process | 2.90E-03 |
| 43 | GO:0051017: actin filament bundle assembly | 3.11E-03 |
| 44 | GO:0009768: photosynthesis, light harvesting in photosystem I | 3.32E-03 |
| 45 | GO:0019953: sexual reproduction | 3.32E-03 |
| 46 | GO:0016998: cell wall macromolecule catabolic process | 3.54E-03 |
| 47 | GO:0030245: cellulose catabolic process | 3.77E-03 |
| 48 | GO:0001944: vasculature development | 4.00E-03 |
| 49 | GO:0019722: calcium-mediated signaling | 4.23E-03 |
| 50 | GO:0010091: trichome branching | 4.23E-03 |
| 51 | GO:0010089: xylem development | 4.23E-03 |
| 52 | GO:0042335: cuticle development | 4.71E-03 |
| 53 | GO:0010087: phloem or xylem histogenesis | 4.71E-03 |
| 54 | GO:0048544: recognition of pollen | 5.22E-03 |
| 55 | GO:0006635: fatty acid beta-oxidation | 5.74E-03 |
| 56 | GO:0010583: response to cyclopentenone | 6.00E-03 |
| 57 | GO:0080167: response to karrikin | 6.54E-03 |
| 58 | GO:0009828: plant-type cell wall loosening | 6.55E-03 |
| 59 | GO:0007267: cell-cell signaling | 6.83E-03 |
| 60 | GO:0042742: defense response to bacterium | 7.12E-03 |
| 61 | GO:0010411: xyloglucan metabolic process | 8.29E-03 |
| 62 | GO:0018298: protein-chromophore linkage | 8.91E-03 |
| 63 | GO:0048767: root hair elongation | 9.22E-03 |
| 64 | GO:0010218: response to far red light | 9.54E-03 |
| 65 | GO:0009637: response to blue light | 1.05E-02 |
| 66 | GO:0010114: response to red light | 1.26E-02 |
| 67 | GO:0042546: cell wall biogenesis | 1.29E-02 |
| 68 | GO:0009644: response to high light intensity | 1.33E-02 |
| 69 | GO:0009664: plant-type cell wall organization | 1.48E-02 |
| 70 | GO:0009809: lignin biosynthetic process | 1.55E-02 |
| 71 | GO:0006813: potassium ion transport | 1.55E-02 |
| 72 | GO:0018105: peptidyl-serine phosphorylation | 2.04E-02 |
| 73 | GO:0010150: leaf senescence | 2.94E-02 |
| 74 | GO:0045490: pectin catabolic process | 2.94E-02 |
| 75 | GO:0009826: unidimensional cell growth | 3.91E-02 |
| 76 | GO:0009658: chloroplast organization | 4.01E-02 |
| 77 | GO:0009409: response to cold | 4.69E-02 |
| 78 | GO:0046777: protein autophosphorylation | 4.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 2 | GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | 0.00E+00 |
| 3 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 4 | GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity | 0.00E+00 |
| 5 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 6 | GO:0051920: peroxiredoxin activity | 4.80E-08 |
| 7 | GO:0016209: antioxidant activity | 1.23E-07 |
| 8 | GO:0004795: threonine synthase activity | 5.48E-05 |
| 9 | GO:0004018: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity | 5.48E-05 |
| 10 | GO:0008809: carnitine racemase activity | 5.48E-05 |
| 11 | GO:0047259: glucomannan 4-beta-mannosyltransferase activity | 5.48E-05 |
| 12 | GO:0070626: (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity | 5.48E-05 |
| 13 | GO:0004560: alpha-L-fucosidase activity | 5.48E-05 |
| 14 | GO:0004601: peroxidase activity | 6.50E-05 |
| 15 | GO:0016630: protochlorophyllide reductase activity | 1.34E-04 |
| 16 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 1.34E-04 |
| 17 | GO:0009055: electron carrier activity | 2.14E-04 |
| 18 | GO:0070402: NADPH binding | 2.28E-04 |
| 19 | GO:0070180: large ribosomal subunit rRNA binding | 2.28E-04 |
| 20 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 3.33E-04 |
| 21 | GO:0004165: dodecenoyl-CoA delta-isomerase activity | 3.33E-04 |
| 22 | GO:0008194: UDP-glycosyltransferase activity | 4.47E-04 |
| 23 | GO:0016168: chlorophyll binding | 5.47E-04 |
| 24 | GO:0003959: NADPH dehydrogenase activity | 5.66E-04 |
| 25 | GO:0009922: fatty acid elongase activity | 5.66E-04 |
| 26 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 7.69E-04 |
| 27 | GO:0051753: mannan synthase activity | 8.25E-04 |
| 28 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 8.25E-04 |
| 29 | GO:0004033: aldo-keto reductase (NADP) activity | 1.11E-03 |
| 30 | GO:0052747: sinapyl alcohol dehydrogenase activity | 1.11E-03 |
| 31 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 1.41E-03 |
| 32 | GO:0030234: enzyme regulator activity | 1.75E-03 |
| 33 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 1.83E-03 |
| 34 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 1.83E-03 |
| 35 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 2.11E-03 |
| 36 | GO:0016757: transferase activity, transferring glycosyl groups | 2.19E-03 |
| 37 | GO:0004565: beta-galactosidase activity | 2.30E-03 |
| 38 | GO:0031409: pigment binding | 2.90E-03 |
| 39 | GO:0008324: cation transmembrane transporter activity | 3.32E-03 |
| 40 | GO:0033612: receptor serine/threonine kinase binding | 3.54E-03 |
| 41 | GO:0030570: pectate lyase activity | 4.00E-03 |
| 42 | GO:0008810: cellulase activity | 4.00E-03 |
| 43 | GO:0022891: substrate-specific transmembrane transporter activity | 4.00E-03 |
| 44 | GO:0005102: receptor binding | 4.47E-03 |
| 45 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 5.74E-03 |
| 46 | GO:0050660: flavin adenine dinucleotide binding | 6.10E-03 |
| 47 | GO:0051015: actin filament binding | 6.27E-03 |
| 48 | GO:0016759: cellulose synthase activity | 6.55E-03 |
| 49 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 7.99E-03 |
| 50 | GO:0004683: calmodulin-dependent protein kinase activity | 8.29E-03 |
| 51 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 8.29E-03 |
| 52 | GO:0004222: metalloendopeptidase activity | 9.54E-03 |
| 53 | GO:0030145: manganese ion binding | 9.86E-03 |
| 54 | GO:0003746: translation elongation factor activity | 1.05E-02 |
| 55 | GO:0008289: lipid binding | 1.35E-02 |
| 56 | GO:0045735: nutrient reservoir activity | 1.75E-02 |
| 57 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 2.27E-02 |
| 58 | GO:0030246: carbohydrate binding | 2.31E-02 |
| 59 | GO:0019843: rRNA binding | 2.34E-02 |
| 60 | GO:0005516: calmodulin binding | 2.59E-02 |
| 61 | GO:0016788: hydrolase activity, acting on ester bonds | 4.07E-02 |
| 62 | GO:0016491: oxidoreductase activity | 4.57E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0048046: apoplast | 9.84E-10 |
| 2 | GO:0009534: chloroplast thylakoid | 4.47E-07 |
| 3 | GO:0009507: chloroplast | 1.33E-05 |
| 4 | GO:0009923: fatty acid elongase complex | 5.48E-05 |
| 5 | GO:0009505: plant-type cell wall | 5.55E-05 |
| 6 | GO:0009570: chloroplast stroma | 1.18E-04 |
| 7 | GO:0005853: eukaryotic translation elongation factor 1 complex | 2.28E-04 |
| 8 | GO:0009941: chloroplast envelope | 2.39E-04 |
| 9 | GO:0032432: actin filament bundle | 3.33E-04 |
| 10 | GO:0010319: stromule | 4.63E-04 |
| 11 | GO:0005576: extracellular region | 8.01E-04 |
| 12 | GO:0005762: mitochondrial large ribosomal subunit | 8.25E-04 |
| 13 | GO:0009533: chloroplast stromal thylakoid | 9.62E-04 |
| 14 | GO:0009535: chloroplast thylakoid membrane | 1.06E-03 |
| 15 | GO:0005884: actin filament | 1.93E-03 |
| 16 | GO:0000311: plastid large ribosomal subunit | 2.11E-03 |
| 17 | GO:0010287: plastoglobule | 2.37E-03 |
| 18 | GO:0000312: plastid small ribosomal subunit | 2.49E-03 |
| 19 | GO:0030076: light-harvesting complex | 2.70E-03 |
| 20 | GO:0005618: cell wall | 2.87E-03 |
| 21 | GO:0009522: photosystem I | 5.22E-03 |
| 22 | GO:0009523: photosystem II | 5.48E-03 |
| 23 | GO:0009536: plastid | 9.23E-03 |
| 24 | GO:0043231: intracellular membrane-bounded organelle | 1.06E-02 |
| 25 | GO:0009706: chloroplast inner membrane | 1.99E-02 |
| 26 | GO:0009543: chloroplast thylakoid lumen | 2.34E-02 |
| 27 | GO:0005615: extracellular space | 3.19E-02 |
| 28 | GO:0022627: cytosolic small ribosomal subunit | 3.59E-02 |
| 29 | GO:0046658: anchored component of plasma membrane | 3.59E-02 |
| 30 | GO:0031969: chloroplast membrane | 4.68E-02 |
| 31 | GO:0000139: Golgi membrane | 4.69E-02 |