co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G23090

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1901799: negative regulation of proteasomal protein catabolic process	0.00E+00
2	GO:0033539: fatty acid beta-oxidation using acyl-CoA dehydrogenase	0.00E+00
3	GO:0045185: maintenance of protein location	0.00E+00
4	GO:0006227: dUDP biosynthetic process	0.00E+00
5	GO:0006593: ornithine catabolic process	0.00E+00
6	GO:0006233: dTDP biosynthetic process	0.00E+00
7	GO:0032780: negative regulation of ATPase activity	0.00E+00
8	GO:0006235: dTTP biosynthetic process	0.00E+00
9	GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase	0.00E+00
10	GO:1901017: negative regulation of potassium ion transmembrane transporter activity	0.00E+00
11	GO:0010360: negative regulation of anion channel activity	0.00E+00
12	GO:0050999: regulation of nitric-oxide synthase activity	0.00E+00
13	GO:0032497: detection of lipopolysaccharide	0.00E+00
14	GO:0070534: protein K63-linked ubiquitination	9.35E-06
15	GO:0006301: postreplication repair	2.35E-05
16	GO:0016559: peroxisome fission	5.89E-05
17	GO:0045454: cell redox homeostasis	6.59E-05
18	GO:0019544: arginine catabolic process to glutamate	1.02E-04
19	GO:0006481: C-terminal protein methylation	1.02E-04
20	GO:1902361: mitochondrial pyruvate transmembrane transport	1.02E-04
21	GO:0000266: mitochondrial fission	1.82E-04
22	GO:0031648: protein destabilization	2.40E-04
23	GO:0043100: pyrimidine nucleobase salvage	2.40E-04
24	GO:0015720: allantoin transport	2.40E-04
25	GO:0071452: cellular response to singlet oxygen	2.40E-04
26	GO:0006212: uracil catabolic process	2.40E-04
27	GO:0052542: defense response by callose deposition	2.40E-04
28	GO:0015857: uracil transport	2.40E-04
29	GO:0019483: beta-alanine biosynthetic process	2.40E-04
30	GO:0006850: mitochondrial pyruvate transport	2.40E-04
31	GO:0015865: purine nucleotide transport	2.40E-04
32	GO:0051646: mitochondrion localization	3.99E-04
33	GO:0051259: protein oligomerization	5.73E-04
34	GO:0046902: regulation of mitochondrial membrane permeability	5.73E-04
35	GO:0010222: stem vascular tissue pattern formation	7.62E-04
36	GO:0005513: detection of calcium ion	9.62E-04
37	GO:0030308: negative regulation of cell growth	9.62E-04
38	GO:0000290: deadenylation-dependent decapping of nuclear-transcribed mRNA	9.62E-04
39	GO:0046907: intracellular transport	9.62E-04
40	GO:0006014: D-ribose metabolic process	1.17E-03
41	GO:0006561: proline biosynthetic process	1.17E-03
42	GO:0016070: RNA metabolic process	1.17E-03
43	GO:0045040: protein import into mitochondrial outer membrane	1.17E-03
44	GO:0010337: regulation of salicylic acid metabolic process	1.17E-03
45	GO:0048280: vesicle fusion with Golgi apparatus	1.40E-03
46	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.40E-03
47	GO:0006333: chromatin assembly or disassembly	1.65E-03
48	GO:0006955: immune response	1.65E-03
49	GO:0009631: cold acclimation	1.69E-03
50	GO:2000070: regulation of response to water deprivation	1.90E-03
51	GO:0030091: protein repair	1.90E-03
52	GO:0043562: cellular response to nitrogen levels	2.17E-03
53	GO:0008202: steroid metabolic process	2.74E-03
54	GO:0042538: hyperosmotic salinity response	2.98E-03
55	GO:0006896: Golgi to vacuole transport	3.05E-03
56	GO:0006995: cellular response to nitrogen starvation	3.05E-03
57	GO:0016485: protein processing	3.36E-03
58	GO:0043085: positive regulation of catalytic activity	3.36E-03
59	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	3.69E-03
60	GO:0071365: cellular response to auxin stimulus	3.69E-03
61	GO:0009626: plant-type hypersensitive response	4.01E-03
62	GO:0006626: protein targeting to mitochondrion	4.02E-03
63	GO:0010053: root epidermal cell differentiation	4.72E-03
64	GO:0009225: nucleotide-sugar metabolic process	4.72E-03
65	GO:0010167: response to nitrate	4.72E-03
66	GO:0010039: response to iron ion	4.72E-03
67	GO:2000377: regulation of reactive oxygen species metabolic process	5.46E-03
68	GO:0006825: copper ion transport	5.85E-03
69	GO:0007005: mitochondrion organization	6.64E-03
70	GO:0080092: regulation of pollen tube growth	6.64E-03
71	GO:0019722: calcium-mediated signaling	7.48E-03
72	GO:0042147: retrograde transport, endosome to Golgi	7.91E-03
73	GO:0048544: recognition of pollen	9.26E-03
74	GO:0019252: starch biosynthetic process	9.73E-03
75	GO:0006623: protein targeting to vacuole	9.73E-03
76	GO:0010183: pollen tube guidance	9.73E-03
77	GO:0009749: response to glucose	9.73E-03
78	GO:0006891: intra-Golgi vesicle-mediated transport	1.02E-02
79	GO:0006635: fatty acid beta-oxidation	1.02E-02
80	GO:0009630: gravitropism	1.07E-02
81	GO:0007264: small GTPase mediated signal transduction	1.07E-02
82	GO:0016032: viral process	1.07E-02
83	GO:0006464: cellular protein modification process	1.17E-02
84	GO:0010286: heat acclimation	1.22E-02
85	GO:0006511: ubiquitin-dependent protein catabolic process	1.24E-02
86	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.38E-02
87	GO:0009816: defense response to bacterium, incompatible interaction	1.38E-02
88	GO:0006974: cellular response to DNA damage stimulus	1.43E-02
89	GO:0006888: ER to Golgi vesicle-mediated transport	1.48E-02
90	GO:0008219: cell death	1.60E-02
91	GO:0046777: protein autophosphorylation	1.61E-02
92	GO:0006499: N-terminal protein myristoylation	1.71E-02
93	GO:0007568: aging	1.77E-02
94	GO:0009853: photorespiration	1.89E-02
95	GO:0045087: innate immune response	1.89E-02
96	GO:0034599: cellular response to oxidative stress	1.95E-02
97	GO:0006839: mitochondrial transport	2.07E-02
98	GO:0009640: photomorphogenesis	2.26E-02
99	GO:0009651: response to salt stress	3.02E-02
100	GO:0048367: shoot system development	3.22E-02
101	GO:0009908: flower development	3.56E-02
102	GO:0055114: oxidation-reduction process	3.80E-02
103	GO:0035556: intracellular signal transduction	4.15E-02
104	GO:0009058: biosynthetic process	4.38E-02

Rank	GO Term	Adjusted P value
1	GO:0070191: methionine-R-sulfoxide reductase activity	0.00E+00
2	GO:0004798: thymidylate kinase activity	0.00E+00
3	GO:0004157: dihydropyrimidinase activity	0.00E+00
4	GO:0042030: ATPase inhibitor activity	0.00E+00
5	GO:0016603: glutaminyl-peptide cyclotransferase activity	0.00E+00
6	GO:0015370: solute:sodium symporter activity	0.00E+00
7	GO:0004587: ornithine-oxo-acid transaminase activity	0.00E+00
8	GO:0019211: phosphatase activator activity	0.00E+00
9	GO:0015505: uracil:cation symporter activity	0.00E+00
10	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	3.34E-05
11	GO:0019707: protein-cysteine S-acyltransferase activity	1.02E-04
12	GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity	1.02E-04
13	GO:0030544: Hsp70 protein binding	1.02E-04
14	GO:0004566: beta-glucuronidase activity	2.40E-04
15	GO:0005274: allantoin uptake transmembrane transporter activity	2.40E-04
16	GO:0008430: selenium binding	3.99E-04
17	GO:0016531: copper chaperone activity	3.99E-04
18	GO:0019003: GDP binding	3.99E-04
19	GO:0050833: pyruvate transmembrane transporter activity	3.99E-04
20	GO:0031625: ubiquitin protein ligase binding	4.03E-04
21	GO:0000339: RNA cap binding	5.73E-04
22	GO:0004300: enoyl-CoA hydratase activity	5.73E-04
23	GO:0009041: uridylate kinase activity	5.73E-04
24	GO:0004792: thiosulfate sulfurtransferase activity	5.73E-04
25	GO:0030527: structural constituent of chromatin	5.73E-04
26	GO:0015035: protein disulfide oxidoreductase activity	5.75E-04
27	GO:0016004: phospholipase activator activity	7.62E-04
28	GO:0015204: urea transmembrane transporter activity	7.62E-04
29	GO:0015210: uracil transmembrane transporter activity	7.62E-04
30	GO:0050378: UDP-glucuronate 4-epimerase activity	7.62E-04
31	GO:0009055: electron carrier activity	7.92E-04
32	GO:0005496: steroid binding	9.62E-04
33	GO:0005471: ATP:ADP antiporter activity	9.62E-04
34	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	1.40E-03
35	GO:0004747: ribokinase activity	1.40E-03
36	GO:0008235: metalloexopeptidase activity	1.65E-03
37	GO:0008865: fructokinase activity	1.90E-03
38	GO:0008142: oxysterol binding	2.17E-03
39	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	2.45E-03
40	GO:0071949: FAD binding	2.45E-03
41	GO:0061630: ubiquitin protein ligase activity	2.63E-03
42	GO:0045309: protein phosphorylated amino acid binding	2.74E-03
43	GO:0004177: aminopeptidase activity	3.36E-03
44	GO:0004129: cytochrome-c oxidase activity	3.36E-03
45	GO:0008794: arsenate reductase (glutaredoxin) activity	3.36E-03
46	GO:0019904: protein domain specific binding	3.36E-03
47	GO:0005515: protein binding	3.47E-03
48	GO:0003824: catalytic activity	5.66E-03
49	GO:0047134: protein-disulfide reductase activity	7.91E-03
50	GO:0004842: ubiquitin-protein transferase activity	8.02E-03
51	GO:0004791: thioredoxin-disulfide reductase activity	9.26E-03
52	GO:0050662: coenzyme binding	9.26E-03
53	GO:0004872: receptor activity	9.73E-03
54	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.12E-02
55	GO:0004497: monooxygenase activity	1.50E-02
56	GO:0008236: serine-type peptidase activity	1.54E-02
57	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.60E-02
58	GO:0003746: translation elongation factor activity	1.89E-02
59	GO:0000149: SNARE binding	2.01E-02
60	GO:0005484: SNAP receptor activity	2.26E-02
61	GO:0051537: 2 iron, 2 sulfur cluster binding	2.39E-02
62	GO:0035091: phosphatidylinositol binding	2.39E-02
63	GO:0015293: symporter activity	2.46E-02
64	GO:0045735: nutrient reservoir activity	3.15E-02
65	GO:0004386: helicase activity	3.82E-02
66	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.30E-02
67	GO:0030170: pyridoxal phosphate binding	4.54E-02
68	GO:0016740: transferase activity	4.78E-02
69	GO:0008565: protein transporter activity	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0031372: UBC13-MMS2 complex	9.35E-06
2	GO:0005778: peroxisomal membrane	6.72E-05
3	GO:0005741: mitochondrial outer membrane	4.03E-04
4	GO:0032586: protein storage vacuole membrane	7.62E-04
5	GO:0030140: trans-Golgi network transport vesicle	1.17E-03
6	GO:0005783: endoplasmic reticulum	1.25E-03
7	GO:0031305: integral component of mitochondrial inner membrane	1.90E-03
8	GO:0012507: ER to Golgi transport vesicle membrane	1.90E-03
9	GO:0000326: protein storage vacuole	2.17E-03
10	GO:0005742: mitochondrial outer membrane translocase complex	2.17E-03
11	GO:0000502: proteasome complex	3.19E-03
12	GO:0005765: lysosomal membrane	3.36E-03
13	GO:0016021: integral component of membrane	4.43E-03
14	GO:0005758: mitochondrial intermembrane space	5.46E-03
15	GO:0045271: respiratory chain complex I	5.85E-03
16	GO:0005759: mitochondrial matrix	7.10E-03
17	GO:0005744: mitochondrial inner membrane presequence translocase complex	7.48E-03
18	GO:0005829: cytosol	8.79E-03
19	GO:0005770: late endosome	8.80E-03
20	GO:0005789: endoplasmic reticulum membrane	9.33E-03
21	GO:0005777: peroxisome	9.99E-03
22	GO:0000785: chromatin	1.07E-02
23	GO:0005794: Golgi apparatus	1.15E-02
24	GO:0032580: Golgi cisterna membrane	1.17E-02
25	GO:0000932: P-body	1.32E-02
26	GO:0005886: plasma membrane	1.50E-02
27	GO:0005802: trans-Golgi network	1.52E-02
28	GO:0000325: plant-type vacuole	1.77E-02
29	GO:0031201: SNARE complex	2.13E-02
30	GO:0031902: late endosome membrane	2.13E-02
31	GO:0031966: mitochondrial membrane	2.66E-02
32	GO:0005635: nuclear envelope	2.94E-02
33	GO:0016607: nuclear speck	3.22E-02
34	GO:0010008: endosome membrane	3.22E-02
35	GO:0005747: mitochondrial respiratory chain complex I	3.22E-02
36	GO:0012505: endomembrane system	3.52E-02
37	GO:0005732: small nucleolar ribonucleoprotein complex	3.82E-02
38	GO:0005654: nucleoplasm	4.14E-02