Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G21630

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1903428: positive regulation of reactive oxygen species biosynthetic process0.00E+00
2GO:0010378: temperature compensation of the circadian clock0.00E+00
3GO:0009768: photosynthesis, light harvesting in photosystem I5.22E-15
4GO:0018298: protein-chromophore linkage1.55E-10
5GO:0010218: response to far red light2.05E-10
6GO:0015979: photosynthesis2.64E-09
7GO:0009645: response to low light intensity stimulus5.00E-09
8GO:0010114: response to red light7.51E-08
9GO:0009644: response to high light intensity9.00E-08
10GO:0009409: response to cold8.32E-07
11GO:0009769: photosynthesis, light harvesting in photosystem II2.45E-06
12GO:0009637: response to blue light4.11E-06
13GO:0034472: snRNA 3'-end processing1.67E-05
14GO:0010496: intercellular transport1.67E-05
15GO:0090057: root radial pattern formation4.35E-05
16GO:0051170: nuclear import4.35E-05
17GO:0006598: polyamine catabolic process7.77E-05
18GO:0030104: water homeostasis1.61E-04
19GO:0009765: photosynthesis, light harvesting1.61E-04
20GO:0010600: regulation of auxin biosynthetic process1.61E-04
21GO:0048578: positive regulation of long-day photoperiodism, flowering2.09E-04
22GO:0042542: response to hydrogen peroxide2.39E-04
23GO:0009635: response to herbicide2.59E-04
24GO:0010244: response to low fluence blue light stimulus by blue low-fluence system3.11E-04
25GO:0009585: red, far-red light phototransduction3.37E-04
26GO:0010161: red light signaling pathway3.66E-04
27GO:0009704: de-etiolation4.23E-04
28GO:0010928: regulation of auxin mediated signaling pathway4.23E-04
29GO:0009416: response to light stimulus4.41E-04
30GO:0010099: regulation of photomorphogenesis4.82E-04
31GO:0090333: regulation of stomatal closure5.42E-04
32GO:0009641: shade avoidance6.68E-04
33GO:0007623: circadian rhythm8.05E-04
34GO:0009718: anthocyanin-containing compound biosynthetic process8.70E-04
35GO:0048511: rhythmic process1.31E-03
36GO:0009269: response to desiccation1.31E-03
37GO:0010017: red or far-red light signaling pathway1.39E-03
38GO:0071215: cellular response to abscisic acid stimulus1.47E-03
39GO:0080167: response to karrikin1.49E-03
40GO:0006814: sodium ion transport1.91E-03
41GO:0042752: regulation of circadian rhythm1.91E-03
42GO:0000302: response to reactive oxygen species2.09E-03
43GO:1901657: glycosyl compound metabolic process2.28E-03
44GO:0015995: chlorophyll biosynthetic process2.99E-03
45GO:0000160: phosphorelay signal transduction system3.31E-03
46GO:0009735: response to cytokinin3.51E-03
47GO:0010119: regulation of stomatal movement3.53E-03
48GO:0009631: cold acclimation3.53E-03
49GO:0006839: mitochondrial transport4.11E-03
50GO:0009640: photomorphogenesis4.47E-03
51GO:0051707: response to other organism4.47E-03
52GO:0055085: transmembrane transport4.85E-03
53GO:0042538: hyperosmotic salinity response5.22E-03
54GO:0009624: response to nematode6.99E-03
55GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.11E-02
56GO:0006810: transport1.14E-02
57GO:0010468: regulation of gene expression1.16E-02
58GO:0046686: response to cadmium ion1.21E-02
59GO:0006355: regulation of transcription, DNA-templated1.33E-02
60GO:0009658: chloroplast organization1.39E-02
61GO:0009737: response to abscisic acid1.65E-02
62GO:0010200: response to chitin1.66E-02
63GO:0045892: negative regulation of transcription, DNA-templated1.86E-02
64GO:0006351: transcription, DNA-templated1.93E-02
65GO:0032259: methylation2.07E-02
66GO:0006629: lipid metabolic process2.14E-02
67GO:0009753: response to jasmonic acid2.25E-02
68GO:0009908: flower development3.00E-02
69GO:0009738: abscisic acid-activated signaling pathway3.15E-02
70GO:0009611: response to wounding3.27E-02
71GO:0035556: intracellular signal transduction3.35E-02
72GO:0045893: positive regulation of transcription, DNA-templated3.55E-02
73GO:0006457: protein folding3.87E-02
RankGO TermAdjusted P value
1GO:0080082: esculin beta-glucosidase activity0.00E+00
2GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity0.00E+00
3GO:0047668: amygdalin beta-glucosidase activity0.00E+00
4GO:0080083: beta-gentiobiose beta-glucosidase activity0.00E+00
5GO:0030504: inorganic diphosphate transmembrane transporter activity0.00E+00
6GO:0004567: beta-mannosidase activity0.00E+00
7GO:0031409: pigment binding2.48E-15
8GO:0016168: chlorophyll binding3.86E-13
9GO:0080079: cellobiose glucosidase activity1.67E-05
10GO:0046592: polyamine oxidase activity7.77E-05
11GO:0000989: transcription factor activity, transcription factor binding5.42E-04
12GO:0047372: acylglycerol lipase activity7.34E-04
13GO:0005315: inorganic phosphate transmembrane transporter activity8.70E-04
14GO:0008131: primary amine oxidase activity9.39E-04
15GO:0004707: MAP kinase activity1.31E-03
16GO:0008514: organic anion transmembrane transporter activity1.56E-03
17GO:0000156: phosphorelay response regulator activity2.28E-03
18GO:0046872: metal ion binding2.58E-03
19GO:0102483: scopolin beta-glucosidase activity2.99E-03
20GO:0003993: acid phosphatase activity3.87E-03
21GO:0008422: beta-glucosidase activity3.99E-03
22GO:0015293: symporter activity4.83E-03
23GO:0005198: structural molecule activity4.83E-03
24GO:0005515: protein binding7.86E-03
25GO:0005215: transporter activity8.55E-03
26GO:0015144: carbohydrate transmembrane transporter activity9.26E-03
27GO:0005351: sugar:proton symporter activity1.01E-02
28GO:0008168: methyltransferase activity1.36E-02
29GO:0061630: ubiquitin protein ligase activity1.68E-02
30GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.93E-02
31GO:0043565: sequence-specific DNA binding3.97E-02
32GO:0005516: calmodulin binding4.31E-02
RankGO TermAdjusted P value
1GO:0030076: light-harvesting complex8.96E-13
2GO:0009522: photosystem I1.66E-11
3GO:0009579: thylakoid3.07E-11
4GO:0010287: plastoglobule6.20E-11
5GO:0009534: chloroplast thylakoid1.60E-09
6GO:0009523: photosystem II4.61E-09
7GO:0009535: chloroplast thylakoid membrane6.80E-09
8GO:0009941: chloroplast envelope1.26E-07
9GO:0009507: chloroplast5.69E-05
10GO:0009517: PSII associated light-harvesting complex II1.61E-04
11GO:0009538: photosystem I reaction center4.23E-04
12GO:0005938: cell cortex8.70E-04
13GO:0042651: thylakoid membrane1.23E-03
14GO:0016020: membrane1.57E-03
15GO:0016021: integral component of membrane2.17E-03
16GO:0016607: nuclear speck6.28E-03
17GO:0005654: nucleoplasm8.02E-03
18GO:0005623: cell8.32E-03
19GO:0005743: mitochondrial inner membrane2.03E-02
20GO:0022626: cytosolic ribosome3.12E-02
21GO:0005777: peroxisome3.55E-02
22GO:0031225: anchored component of membrane4.42E-02
23GO:0005622: intracellular4.85E-02
24GO:0005768: endosome4.94E-02
Gene type



Gene DE type