GO Enrichment Analysis of Co-expressed Genes with
AT2G21530
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 2 | GO:0015979: photosynthesis | 1.22E-09 |
| 3 | GO:0061077: chaperone-mediated protein folding | 5.85E-06 |
| 4 | GO:0009658: chloroplast organization | 7.51E-06 |
| 5 | GO:0006810: transport | 2.36E-05 |
| 6 | GO:0032544: plastid translation | 4.07E-05 |
| 7 | GO:0071588: hydrogen peroxide mediated signaling pathway | 6.91E-05 |
| 8 | GO:0018119: peptidyl-cysteine S-nitrosylation | 8.80E-05 |
| 9 | GO:0009773: photosynthetic electron transport in photosystem I | 8.80E-05 |
| 10 | GO:0006415: translational termination | 8.80E-05 |
| 11 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 1.66E-04 |
| 12 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 1.66E-04 |
| 13 | GO:0071492: cellular response to UV-A | 2.81E-04 |
| 14 | GO:0006696: ergosterol biosynthetic process | 2.81E-04 |
| 15 | GO:0006000: fructose metabolic process | 2.81E-04 |
| 16 | GO:0016117: carotenoid biosynthetic process | 3.38E-04 |
| 17 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 4.06E-04 |
| 18 | GO:2000122: negative regulation of stomatal complex development | 5.42E-04 |
| 19 | GO:0006546: glycine catabolic process | 5.42E-04 |
| 20 | GO:0010037: response to carbon dioxide | 5.42E-04 |
| 21 | GO:0015976: carbon utilization | 5.42E-04 |
| 22 | GO:0071486: cellular response to high light intensity | 5.42E-04 |
| 23 | GO:0019464: glycine decarboxylation via glycine cleavage system | 5.42E-04 |
| 24 | GO:0045727: positive regulation of translation | 5.42E-04 |
| 25 | GO:0031365: N-terminal protein amino acid modification | 6.87E-04 |
| 26 | GO:0010190: cytochrome b6f complex assembly | 8.40E-04 |
| 27 | GO:0042549: photosystem II stabilization | 8.40E-04 |
| 28 | GO:0016554: cytidine to uridine editing | 8.40E-04 |
| 29 | GO:0006458: 'de novo' protein folding | 9.99E-04 |
| 30 | GO:0010019: chloroplast-nucleus signaling pathway | 9.99E-04 |
| 31 | GO:0042026: protein refolding | 9.99E-04 |
| 32 | GO:0034599: cellular response to oxidative stress | 1.16E-03 |
| 33 | GO:0009819: drought recovery | 1.34E-03 |
| 34 | GO:0006002: fructose 6-phosphate metabolic process | 1.53E-03 |
| 35 | GO:0009657: plastid organization | 1.53E-03 |
| 36 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 1.73E-03 |
| 37 | GO:0010206: photosystem II repair | 1.73E-03 |
| 38 | GO:1900865: chloroplast RNA modification | 1.93E-03 |
| 39 | GO:0043085: positive regulation of catalytic activity | 2.36E-03 |
| 40 | GO:0000272: polysaccharide catabolic process | 2.36E-03 |
| 41 | GO:0009750: response to fructose | 2.36E-03 |
| 42 | GO:0005983: starch catabolic process | 2.58E-03 |
| 43 | GO:0006094: gluconeogenesis | 2.82E-03 |
| 44 | GO:0009767: photosynthetic electron transport chain | 2.82E-03 |
| 45 | GO:0005986: sucrose biosynthetic process | 2.82E-03 |
| 46 | GO:0010207: photosystem II assembly | 3.06E-03 |
| 47 | GO:0010020: chloroplast fission | 3.06E-03 |
| 48 | GO:0019253: reductive pentose-phosphate cycle | 3.06E-03 |
| 49 | GO:0006636: unsaturated fatty acid biosynthetic process | 3.56E-03 |
| 50 | GO:0009768: photosynthesis, light harvesting in photosystem I | 4.08E-03 |
| 51 | GO:0006413: translational initiation | 4.31E-03 |
| 52 | GO:0009611: response to wounding | 4.40E-03 |
| 53 | GO:0016226: iron-sulfur cluster assembly | 4.63E-03 |
| 54 | GO:0080092: regulation of pollen tube growth | 4.63E-03 |
| 55 | GO:0042631: cellular response to water deprivation | 5.80E-03 |
| 56 | GO:0006662: glycerol ether metabolic process | 6.11E-03 |
| 57 | GO:0000302: response to reactive oxygen species | 7.07E-03 |
| 58 | GO:0010027: thylakoid membrane organization | 9.13E-03 |
| 59 | GO:0042128: nitrate assimilation | 9.87E-03 |
| 60 | GO:0045454: cell redox homeostasis | 1.06E-02 |
| 61 | GO:0016311: dephosphorylation | 1.06E-02 |
| 62 | GO:0018298: protein-chromophore linkage | 1.10E-02 |
| 63 | GO:0009817: defense response to fungus, incompatible interaction | 1.10E-02 |
| 64 | GO:0010218: response to far red light | 1.18E-02 |
| 65 | GO:0010119: regulation of stomatal movement | 1.22E-02 |
| 66 | GO:0009631: cold acclimation | 1.22E-02 |
| 67 | GO:0032259: methylation | 1.25E-02 |
| 68 | GO:0009637: response to blue light | 1.30E-02 |
| 69 | GO:0009853: photorespiration | 1.30E-02 |
| 70 | GO:0009409: response to cold | 1.54E-02 |
| 71 | GO:0010114: response to red light | 1.56E-02 |
| 72 | GO:0009644: response to high light intensity | 1.65E-02 |
| 73 | GO:0006364: rRNA processing | 1.92E-02 |
| 74 | GO:0009735: response to cytokinin | 2.13E-02 |
| 75 | GO:0006096: glycolytic process | 2.17E-02 |
| 76 | GO:0009416: response to light stimulus | 2.33E-02 |
| 77 | GO:0006396: RNA processing | 2.52E-02 |
| 78 | GO:0009737: response to abscisic acid | 2.72E-02 |
| 79 | GO:0055114: oxidation-reduction process | 2.80E-02 |
| 80 | GO:0042744: hydrogen peroxide catabolic process | 3.18E-02 |
| 81 | GO:0006633: fatty acid biosynthetic process | 3.41E-02 |
| 82 | GO:0040008: regulation of growth | 3.53E-02 |
| 83 | GO:0007623: circadian rhythm | 3.65E-02 |
| 84 | GO:0010468: regulation of gene expression | 4.14E-02 |
| 85 | GO:0006508: proteolysis | 4.28E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 2 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 3 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 4 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 5 | GO:0005528: FK506 binding | 4.12E-08 |
| 6 | GO:0016149: translation release factor activity, codon specific | 2.48E-06 |
| 7 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 6.12E-06 |
| 8 | GO:0003747: translation release factor activity | 5.07E-05 |
| 9 | GO:0051996: squalene synthase activity | 6.91E-05 |
| 10 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 1.66E-04 |
| 11 | GO:0042389: omega-3 fatty acid desaturase activity | 1.66E-04 |
| 12 | GO:0004618: phosphoglycerate kinase activity | 1.66E-04 |
| 13 | GO:0010297: heteropolysaccharide binding | 1.66E-04 |
| 14 | GO:0004047: aminomethyltransferase activity | 1.66E-04 |
| 15 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 1.66E-04 |
| 16 | GO:0008967: phosphoglycolate phosphatase activity | 1.66E-04 |
| 17 | GO:0019843: rRNA binding | 3.78E-04 |
| 18 | GO:0005509: calcium ion binding | 3.81E-04 |
| 19 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 4.06E-04 |
| 20 | GO:0005319: lipid transporter activity | 5.42E-04 |
| 21 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 5.42E-04 |
| 22 | GO:1990137: plant seed peroxidase activity | 5.42E-04 |
| 23 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 6.87E-04 |
| 24 | GO:0016168: chlorophyll binding | 7.30E-04 |
| 25 | GO:0016688: L-ascorbate peroxidase activity | 8.40E-04 |
| 26 | GO:0004130: cytochrome-c peroxidase activity | 8.40E-04 |
| 27 | GO:0051920: peroxiredoxin activity | 9.99E-04 |
| 28 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 9.99E-04 |
| 29 | GO:0008235: metalloexopeptidase activity | 1.17E-03 |
| 30 | GO:0016209: antioxidant activity | 1.34E-03 |
| 31 | GO:0004033: aldo-keto reductase (NADP) activity | 1.34E-03 |
| 32 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 1.53E-03 |
| 33 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.54E-03 |
| 34 | GO:0008047: enzyme activator activity | 2.14E-03 |
| 35 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 2.36E-03 |
| 36 | GO:0004177: aminopeptidase activity | 2.36E-03 |
| 37 | GO:0044183: protein binding involved in protein folding | 2.36E-03 |
| 38 | GO:0046872: metal ion binding | 2.62E-03 |
| 39 | GO:0051082: unfolded protein binding | 2.69E-03 |
| 40 | GO:0004089: carbonate dehydratase activity | 2.82E-03 |
| 41 | GO:0031072: heat shock protein binding | 2.82E-03 |
| 42 | GO:0031409: pigment binding | 3.56E-03 |
| 43 | GO:0051536: iron-sulfur cluster binding | 3.81E-03 |
| 44 | GO:0022891: substrate-specific transmembrane transporter activity | 4.91E-03 |
| 45 | GO:0003743: translation initiation factor activity | 5.39E-03 |
| 46 | GO:0047134: protein-disulfide reductase activity | 5.50E-03 |
| 47 | GO:0050662: coenzyme binding | 6.42E-03 |
| 48 | GO:0004791: thioredoxin-disulfide reductase activity | 6.42E-03 |
| 49 | GO:0008168: methyltransferase activity | 6.87E-03 |
| 50 | GO:0048038: quinone binding | 7.07E-03 |
| 51 | GO:0004518: nuclease activity | 7.40E-03 |
| 52 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 7.73E-03 |
| 53 | GO:0008483: transaminase activity | 8.42E-03 |
| 54 | GO:0008236: serine-type peptidase activity | 1.06E-02 |
| 55 | GO:0009055: electron carrier activity | 1.40E-02 |
| 56 | GO:0005198: structural molecule activity | 1.69E-02 |
| 57 | GO:0003735: structural constituent of ribosome | 2.50E-02 |
| 58 | GO:0015035: protein disulfide oxidoreductase activity | 2.52E-02 |
| 59 | GO:0016787: hydrolase activity | 2.74E-02 |
| 60 | GO:0004252: serine-type endopeptidase activity | 3.12E-02 |
| 61 | GO:0042802: identical protein binding | 4.32E-02 |
| 62 | GO:0004601: peroxidase activity | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009575: chromoplast stroma | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 2.24E-41 |
| 3 | GO:0009543: chloroplast thylakoid lumen | 3.76E-17 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 1.14E-16 |
| 5 | GO:0009941: chloroplast envelope | 1.19E-16 |
| 6 | GO:0009570: chloroplast stroma | 5.73E-13 |
| 7 | GO:0009579: thylakoid | 1.41E-10 |
| 8 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.13E-09 |
| 9 | GO:0009654: photosystem II oxygen evolving complex | 5.23E-08 |
| 10 | GO:0009534: chloroplast thylakoid | 7.31E-08 |
| 11 | GO:0031977: thylakoid lumen | 7.86E-08 |
| 12 | GO:0019898: extrinsic component of membrane | 2.97E-07 |
| 13 | GO:0030095: chloroplast photosystem II | 2.29E-06 |
| 14 | GO:0010287: plastoglobule | 2.44E-05 |
| 15 | GO:0043190: ATP-binding cassette (ABC) transporter complex | 6.91E-05 |
| 16 | GO:0009344: nitrite reductase complex [NAD(P)H] | 6.91E-05 |
| 17 | GO:0042170: plastid membrane | 1.66E-04 |
| 18 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 1.66E-04 |
| 19 | GO:0009706: chloroplast inner membrane | 2.82E-04 |
| 20 | GO:0005960: glycine cleavage complex | 4.06E-04 |
| 21 | GO:0009523: photosystem II | 4.53E-04 |
| 22 | GO:0010319: stromule | 6.19E-04 |
| 23 | GO:0009533: chloroplast stromal thylakoid | 1.17E-03 |
| 24 | GO:0031969: chloroplast membrane | 1.27E-03 |
| 25 | GO:0005811: lipid particle | 1.53E-03 |
| 26 | GO:0016324: apical plasma membrane | 2.14E-03 |
| 27 | GO:0005840: ribosome | 2.35E-03 |
| 28 | GO:0030076: light-harvesting complex | 3.30E-03 |
| 29 | GO:0042651: thylakoid membrane | 4.08E-03 |
| 30 | GO:0009532: plastid stroma | 4.35E-03 |
| 31 | GO:0009522: photosystem I | 6.42E-03 |
| 32 | GO:0005778: peroxisomal membrane | 8.42E-03 |
| 33 | GO:0005874: microtubule | 8.55E-03 |
| 34 | GO:0009707: chloroplast outer membrane | 1.10E-02 |
| 35 | GO:0015934: large ribosomal subunit | 1.22E-02 |