co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G21520

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010398: xylogalacturonan metabolic process	0.00E+00
2	GO:0009448: gamma-aminobutyric acid metabolic process	0.00E+00
3	GO:0080056: petal vascular tissue pattern formation	0.00E+00
4	GO:0006105: succinate metabolic process	0.00E+00
5	GO:0019484: beta-alanine catabolic process	0.00E+00
6	GO:0080057: sepal vascular tissue pattern formation	0.00E+00
7	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
8	GO:0010730: negative regulation of hydrogen peroxide biosynthetic process	0.00E+00
9	GO:0000478: endonucleolytic cleavage involved in rRNA processing	0.00E+00
10	GO:0046686: response to cadmium ion	2.37E-06
11	GO:0042344: indole glucosinolate catabolic process	7.40E-06
12	GO:0009399: nitrogen fixation	1.69E-05
13	GO:0000380: alternative mRNA splicing, via spliceosome	5.00E-05
14	GO:0045087: innate immune response	5.47E-05
15	GO:0009415: response to water	1.73E-04
16	GO:0046167: glycerol-3-phosphate biosynthetic process	2.06E-04
17	GO:0035266: meristem growth	2.06E-04
18	GO:0009450: gamma-aminobutyric acid catabolic process	2.06E-04
19	GO:0007292: female gamete generation	2.06E-04
20	GO:1990641: response to iron ion starvation	2.06E-04
21	GO:0000303: response to superoxide	2.06E-04
22	GO:0010184: cytokinin transport	2.06E-04
23	GO:1902265: abscisic acid homeostasis	2.06E-04
24	GO:0009865: pollen tube adhesion	2.06E-04
25	GO:0071366: cellular response to indolebutyric acid stimulus	2.06E-04
26	GO:0006540: glutamate decarboxylation to succinate	2.06E-04
27	GO:0009651: response to salt stress	2.48E-04
28	GO:0048829: root cap development	3.65E-04
29	GO:0052544: defense response by callose deposition in cell wall	4.23E-04
30	GO:0034243: regulation of transcription elongation from RNA polymerase II promoter	4.62E-04
31	GO:0009257: 10-formyltetrahydrofolate biosynthetic process	4.62E-04
32	GO:0010033: response to organic substance	4.62E-04
33	GO:0006641: triglyceride metabolic process	4.62E-04
34	GO:0006101: citrate metabolic process	4.62E-04
35	GO:0051788: response to misfolded protein	4.62E-04
36	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	4.62E-04
37	GO:0018026: peptidyl-lysine monomethylation	4.62E-04
38	GO:0051258: protein polymerization	4.62E-04
39	GO:0010102: lateral root morphogenesis	5.50E-04
40	GO:0030029: actin filament-based process	7.52E-04
41	GO:0060968: regulation of gene silencing	7.52E-04
42	GO:0032786: positive regulation of DNA-templated transcription, elongation	7.52E-04
43	GO:0006954: inflammatory response	7.52E-04
44	GO:0019563: glycerol catabolic process	7.52E-04
45	GO:0006468: protein phosphorylation	1.02E-03
46	GO:0006882: cellular zinc ion homeostasis	1.07E-03
47	GO:0048194: Golgi vesicle budding	1.07E-03
48	GO:0006020: inositol metabolic process	1.07E-03
49	GO:0006072: glycerol-3-phosphate metabolic process	1.07E-03
50	GO:0015749: monosaccharide transport	1.07E-03
51	GO:0009113: purine nucleobase biosynthetic process	1.07E-03
52	GO:0006809: nitric oxide biosynthetic process	1.07E-03
53	GO:0071215: cellular response to abscisic acid stimulus	1.21E-03
54	GO:0006970: response to osmotic stress	1.39E-03
55	GO:0006542: glutamine biosynthetic process	1.43E-03
56	GO:0006646: phosphatidylethanolamine biosynthetic process	1.43E-03
57	GO:0009687: abscisic acid metabolic process	1.43E-03
58	GO:0015743: malate transport	1.43E-03
59	GO:0033320: UDP-D-xylose biosynthetic process	1.43E-03
60	GO:1902584: positive regulation of response to water deprivation	1.43E-03
61	GO:0006536: glutamate metabolic process	1.43E-03
62	GO:0042273: ribosomal large subunit biogenesis	1.43E-03
63	GO:0010188: response to microbial phytotoxin	1.43E-03
64	GO:0006878: cellular copper ion homeostasis	1.43E-03
65	GO:0048367: shoot system development	1.53E-03
66	GO:0046323: glucose import	1.66E-03
67	GO:0048544: recognition of pollen	1.78E-03
68	GO:0006979: response to oxidative stress	1.79E-03
69	GO:0043097: pyrimidine nucleoside salvage	1.81E-03
70	GO:0005513: detection of calcium ion	1.81E-03
71	GO:0016192: vesicle-mediated transport	1.86E-03
72	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	2.24E-03
73	GO:0015691: cadmium ion transport	2.24E-03
74	GO:0048827: phyllome development	2.24E-03
75	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	2.24E-03
76	GO:0048232: male gamete generation	2.24E-03
77	GO:0043248: proteasome assembly	2.24E-03
78	GO:0042732: D-xylose metabolic process	2.24E-03
79	GO:0034314: Arp2/3 complex-mediated actin nucleation	2.24E-03
80	GO:0006206: pyrimidine nucleobase metabolic process	2.24E-03
81	GO:0006014: D-ribose metabolic process	2.24E-03
82	GO:0009737: response to abscisic acid	2.52E-03
83	GO:0009612: response to mechanical stimulus	2.69E-03
84	GO:0001666: response to hypoxia	2.93E-03
85	GO:0009790: embryo development	3.01E-03
86	GO:0098869: cellular oxidant detoxification	3.16E-03
87	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	3.16E-03
88	GO:0009396: folic acid-containing compound biosynthetic process	3.16E-03
89	GO:0009409: response to cold	3.21E-03
90	GO:0048364: root development	3.32E-03
91	GO:0048573: photoperiodism, flowering	3.45E-03
92	GO:0006102: isocitrate metabolic process	3.67E-03
93	GO:0016559: peroxisome fission	3.67E-03
94	GO:0009819: drought recovery	3.67E-03
95	GO:0006605: protein targeting	3.67E-03
96	GO:0010078: maintenance of root meristem identity	3.67E-03
97	GO:0032508: DNA duplex unwinding	3.67E-03
98	GO:0006875: cellular metal ion homeostasis	3.67E-03
99	GO:0009817: defense response to fungus, incompatible interaction	3.82E-03
100	GO:0010311: lateral root formation	4.01E-03
101	GO:0006972: hyperosmotic response	4.20E-03
102	GO:0010262: somatic embryogenesis	4.20E-03
103	GO:0001510: RNA methylation	4.20E-03
104	GO:0006499: N-terminal protein myristoylation	4.21E-03
105	GO:0006811: ion transport	4.21E-03
106	GO:0010043: response to zinc ion	4.42E-03
107	GO:0010119: regulation of stomatal movement	4.42E-03
108	GO:0009617: response to bacterium	4.66E-03
109	GO:0000902: cell morphogenesis	4.75E-03
110	GO:0009051: pentose-phosphate shunt, oxidative branch	4.75E-03
111	GO:0046916: cellular transition metal ion homeostasis	4.75E-03
112	GO:0006099: tricarboxylic acid cycle	5.05E-03
113	GO:0035999: tetrahydrofolate interconversion	5.32E-03
114	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	5.32E-03
115	GO:0008202: steroid metabolic process	5.32E-03
116	GO:0006325: chromatin organization	5.93E-03
117	GO:0042742: defense response to bacterium	6.30E-03
118	GO:0010015: root morphogenesis	6.55E-03
119	GO:0009682: induced systemic resistance	6.55E-03
120	GO:0071365: cellular response to auxin stimulus	7.20E-03
121	GO:0000266: mitochondrial fission	7.20E-03
122	GO:0012501: programmed cell death	7.20E-03
123	GO:0006812: cation transport	7.82E-03
124	GO:0030036: actin cytoskeleton organization	7.87E-03
125	GO:0010588: cotyledon vascular tissue pattern formation	7.87E-03
126	GO:0006807: nitrogen compound metabolic process	7.87E-03
127	GO:0006006: glucose metabolic process	7.87E-03
128	GO:0048467: gynoecium development	8.56E-03
129	GO:0006541: glutamine metabolic process	8.56E-03
130	GO:0002237: response to molecule of bacterial origin	8.56E-03
131	GO:0007034: vacuolar transport	8.56E-03
132	GO:0009933: meristem structural organization	8.56E-03
133	GO:0007015: actin filament organization	8.56E-03
134	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	8.89E-03
135	GO:0090351: seedling development	9.27E-03
136	GO:0010030: positive regulation of seed germination	9.27E-03
137	GO:0009969: xyloglucan biosynthetic process	9.27E-03
138	GO:0009225: nucleotide-sugar metabolic process	9.27E-03
139	GO:0007031: peroxisome organization	9.27E-03
140	GO:0009825: multidimensional cell growth	9.27E-03
141	GO:0010167: response to nitrate	9.27E-03
142	GO:0005985: sucrose metabolic process	9.27E-03
143	GO:0006863: purine nucleobase transport	1.00E-02
144	GO:0000162: tryptophan biosynthetic process	1.00E-02
145	GO:0009626: plant-type hypersensitive response	1.06E-02
146	GO:2000377: regulation of reactive oxygen species metabolic process	1.08E-02
147	GO:0006406: mRNA export from nucleus	1.08E-02
148	GO:0006825: copper ion transport	1.15E-02
149	GO:0009269: response to desiccation	1.23E-02
150	GO:0031408: oxylipin biosynthetic process	1.23E-02
151	GO:0031348: negative regulation of defense response	1.32E-02
152	GO:0071456: cellular response to hypoxia	1.32E-02
153	GO:0030433: ubiquitin-dependent ERAD pathway	1.32E-02
154	GO:0035428: hexose transmembrane transport	1.32E-02
155	GO:0010501: RNA secondary structure unwinding	1.66E-02
156	GO:0000413: protein peptidyl-prolyl isomerization	1.66E-02
157	GO:0010051: xylem and phloem pattern formation	1.66E-02
158	GO:0015991: ATP hydrolysis coupled proton transport	1.66E-02
159	GO:0042631: cellular response to water deprivation	1.66E-02
160	GO:0080022: primary root development	1.66E-02
161	GO:0042391: regulation of membrane potential	1.66E-02
162	GO:0006885: regulation of pH	1.75E-02
163	GO:0006520: cellular amino acid metabolic process	1.75E-02
164	GO:0045489: pectin biosynthetic process	1.75E-02
165	GO:0010154: fruit development	1.75E-02
166	GO:0010305: leaf vascular tissue pattern formation	1.75E-02
167	GO:0009646: response to absence of light	1.84E-02
168	GO:0019252: starch biosynthetic process	1.94E-02
169	GO:0008654: phospholipid biosynthetic process	1.94E-02
170	GO:0010183: pollen tube guidance	1.94E-02
171	GO:0009749: response to glucose	1.94E-02
172	GO:0010193: response to ozone	2.03E-02
173	GO:0009414: response to water deprivation	2.08E-02
174	GO:0010583: response to cyclopentenone	2.13E-02
175	GO:0016032: viral process	2.13E-02
176	GO:0007165: signal transduction	2.23E-02
177	GO:0010090: trichome morphogenesis	2.23E-02
178	GO:0019760: glucosinolate metabolic process	2.33E-02
179	GO:0006914: autophagy	2.33E-02
180	GO:0010286: heat acclimation	2.43E-02
181	GO:0051607: defense response to virus	2.54E-02
182	GO:0009735: response to cytokinin	2.58E-02
183	GO:0009816: defense response to bacterium, incompatible interaction	2.75E-02
184	GO:0009627: systemic acquired resistance	2.86E-02
185	GO:0042128: nitrate assimilation	2.86E-02
186	GO:0016310: phosphorylation	2.94E-02
187	GO:0006950: response to stress	2.97E-02
188	GO:0035556: intracellular signal transduction	3.08E-02
189	GO:0008219: cell death	3.19E-02
190	GO:0009631: cold acclimation	3.54E-02
191	GO:0009723: response to ethylene	3.72E-02
192	GO:0009867: jasmonic acid mediated signaling pathway	3.78E-02
193	GO:0016051: carbohydrate biosynthetic process	3.78E-02
194	GO:0030001: metal ion transport	4.15E-02
195	GO:0046777: protein autophosphorylation	4.25E-02
196	GO:0006897: endocytosis	4.27E-02
197	GO:0051707: response to other organism	4.52E-02
198	GO:0009965: leaf morphogenesis	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0015211: purine nucleoside transmembrane transporter activity	0.00E+00
2	GO:0016428: tRNA (cytosine-5-)-methyltransferase activity	0.00E+00
3	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
4	GO:0047787: delta4-3-oxosteroid 5beta-reductase activity	0.00E+00
5	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
6	GO:0034387: 4-aminobutyrate:pyruvate transaminase activity	0.00E+00
7	GO:0004491: methylmalonate-semialdehyde dehydrogenase (acylating) activity	0.00E+00
8	GO:0004370: glycerol kinase activity	0.00E+00
9	GO:0005524: ATP binding	5.71E-06
10	GO:0004356: glutamate-ammonia ligase activity	5.00E-05
11	GO:0003950: NAD+ ADP-ribosyltransferase activity	1.02E-04
12	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.06E-04
13	GO:0009679: hexose:proton symporter activity	2.06E-04
14	GO:0035671: enone reductase activity	2.06E-04
15	GO:0046870: cadmium ion binding	2.06E-04
16	GO:0004112: cyclic-nucleotide phosphodiesterase activity	2.06E-04
17	GO:0016274: protein-arginine N-methyltransferase activity	2.06E-04
18	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	2.06E-04
19	GO:0003867: 4-aminobutyrate transaminase activity	2.06E-04
20	GO:0005507: copper ion binding	2.08E-04
21	GO:0005509: calcium ion binding	3.99E-04
22	GO:0004353: glutamate dehydrogenase [NAD(P)+] activity	4.62E-04
23	GO:0032791: lead ion binding	4.62E-04
24	GO:0004609: phosphatidylserine decarboxylase activity	4.62E-04
25	GO:0003994: aconitate hydratase activity	4.62E-04
26	GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity	4.62E-04
27	GO:0004477: methenyltetrahydrofolate cyclohydrolase activity	4.62E-04
28	GO:0004839: ubiquitin activating enzyme activity	4.62E-04
29	GO:0004329: formate-tetrahydrofolate ligase activity	4.62E-04
30	GO:0019200: carbohydrate kinase activity	4.62E-04
31	GO:0004352: glutamate dehydrogenase (NAD+) activity	4.62E-04
32	GO:0050897: cobalt ion binding	5.34E-04
33	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	5.50E-04
34	GO:0004383: guanylate cyclase activity	7.52E-04
35	GO:0005047: signal recognition particle binding	7.52E-04
36	GO:0019829: cation-transporting ATPase activity	7.52E-04
37	GO:0001653: peptide receptor activity	1.07E-03
38	GO:0048027: mRNA 5'-UTR binding	1.07E-03
39	GO:0015086: cadmium ion transmembrane transporter activity	1.07E-03
40	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	1.07E-03
41	GO:0016279: protein-lysine N-methyltransferase activity	1.43E-03
42	GO:0004834: tryptophan synthase activity	1.43E-03
43	GO:0004737: pyruvate decarboxylase activity	1.43E-03
44	GO:0004345: glucose-6-phosphate dehydrogenase activity	1.43E-03
45	GO:0043015: gamma-tubulin binding	1.43E-03
46	GO:0005253: anion channel activity	1.43E-03
47	GO:0004576: oligosaccharyl transferase activity	1.43E-03
48	GO:0000993: RNA polymerase II core binding	1.43E-03
49	GO:0010294: abscisic acid glucosyltransferase activity	1.81E-03
50	GO:0015145: monosaccharide transmembrane transporter activity	1.81E-03
51	GO:0008641: small protein activating enzyme activity	1.81E-03
52	GO:0016301: kinase activity	1.84E-03
53	GO:0030976: thiamine pyrophosphate binding	2.24E-03
54	GO:0048040: UDP-glucuronate decarboxylase activity	2.24E-03
55	GO:0015562: efflux transmembrane transporter activity	2.24E-03
56	GO:0019137: thioglucosidase activity	2.24E-03
57	GO:0000293: ferric-chelate reductase activity	2.24E-03
58	GO:0035252: UDP-xylosyltransferase activity	2.24E-03
59	GO:0036402: proteasome-activating ATPase activity	2.24E-03
60	GO:0070403: NAD+ binding	2.69E-03
61	GO:0004849: uridine kinase activity	2.69E-03
62	GO:0070300: phosphatidic acid binding	2.69E-03
63	GO:0004012: phospholipid-translocating ATPase activity	2.69E-03
64	GO:0004602: glutathione peroxidase activity	2.69E-03
65	GO:0004747: ribokinase activity	2.69E-03
66	GO:0004620: phospholipase activity	3.16E-03
67	GO:0016831: carboxy-lyase activity	3.16E-03
68	GO:0015140: malate transmembrane transporter activity	3.16E-03
69	GO:0005337: nucleoside transmembrane transporter activity	3.67E-03
70	GO:0004525: ribonuclease III activity	3.67E-03
71	GO:0004869: cysteine-type endopeptidase inhibitor activity	3.67E-03
72	GO:0008865: fructokinase activity	3.67E-03
73	GO:0004672: protein kinase activity	3.77E-03
74	GO:0005375: copper ion transmembrane transporter activity	4.20E-03
75	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	5.04E-03
76	GO:0008422: beta-glucosidase activity	5.28E-03
77	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	5.32E-03
78	GO:0004674: protein serine/threonine kinase activity	5.80E-03
79	GO:0004713: protein tyrosine kinase activity	5.93E-03
80	GO:0047372: acylglycerol lipase activity	6.55E-03
81	GO:0030552: cAMP binding	9.27E-03
82	GO:0030553: cGMP binding	9.27E-03
83	GO:0017025: TBP-class protein binding	9.27E-03
84	GO:0043130: ubiquitin binding	1.08E-02
85	GO:0043424: protein histidine kinase binding	1.15E-02
86	GO:0005216: ion channel activity	1.15E-02
87	GO:0005345: purine nucleobase transmembrane transporter activity	1.15E-02
88	GO:0008324: cation transmembrane transporter activity	1.15E-02
89	GO:0003729: mRNA binding	1.26E-02
90	GO:0005516: calmodulin binding	1.38E-02
91	GO:0003727: single-stranded RNA binding	1.48E-02
92	GO:0005451: monovalent cation:proton antiporter activity	1.66E-02
93	GO:0005249: voltage-gated potassium channel activity	1.66E-02
94	GO:0030551: cyclic nucleotide binding	1.66E-02
95	GO:0015144: carbohydrate transmembrane transporter activity	1.80E-02
96	GO:0005355: glucose transmembrane transporter activity	1.84E-02
97	GO:0015299: solute:proton antiporter activity	1.84E-02
98	GO:0005351: sugar:proton symporter activity	2.03E-02
99	GO:0008017: microtubule binding	2.18E-02
100	GO:0015385: sodium:proton antiporter activity	2.23E-02
101	GO:0016887: ATPase activity	2.43E-02
102	GO:0005200: structural constituent of cytoskeleton	2.43E-02
103	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.86E-02
104	GO:0004683: calmodulin-dependent protein kinase activity	2.97E-02
105	GO:0102483: scopolin beta-glucosidase activity	2.97E-02
106	GO:0030247: polysaccharide binding	2.97E-02
107	GO:0000287: magnesium ion binding	3.16E-02
108	GO:0005096: GTPase activator activity	3.31E-02
109	GO:0003746: translation elongation factor activity	3.78E-02
110	GO:0003697: single-stranded DNA binding	3.78E-02
111	GO:0050661: NADP binding	4.15E-02
112	GO:0051539: 4 iron, 4 sulfur cluster binding	4.15E-02
113	GO:0043621: protein self-association	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0005785: signal recognition particle receptor complex	0.00E+00
2	GO:0005886: plasma membrane	3.17E-07
3	GO:0005829: cytosol	9.88E-06
4	GO:0016363: nuclear matrix	1.02E-04
5	GO:0045252: oxoglutarate dehydrogenase complex	2.06E-04
6	GO:0032044: DSIF complex	2.06E-04
7	GO:0016602: CCAAT-binding factor complex	5.50E-04
8	GO:0033179: proton-transporting V-type ATPase, V0 domain	1.43E-03
9	GO:0005783: endoplasmic reticulum	2.00E-03
10	GO:0009506: plasmodesma	2.05E-03
11	GO:0005777: peroxisome	2.33E-03
12	GO:0016021: integral component of membrane	2.35E-03
13	GO:0005774: vacuolar membrane	2.52E-03
14	GO:0016020: membrane	2.53E-03
15	GO:0031597: cytosolic proteasome complex	2.69E-03
16	GO:0005885: Arp2/3 protein complex	2.69E-03
17	GO:0000815: ESCRT III complex	2.69E-03
18	GO:0031595: nuclear proteasome complex	3.16E-03
19	GO:0030687: preribosome, large subunit precursor	3.16E-03
20	GO:0005737: cytoplasm	3.19E-03
21	GO:0030131: clathrin adaptor complex	3.67E-03
22	GO:0009705: plant-type vacuole membrane	3.72E-03
23	GO:0005779: integral component of peroxisomal membrane	4.20E-03
24	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	4.20E-03
25	GO:0008540: proteasome regulatory particle, base subcomplex	5.32E-03
26	GO:0030125: clathrin vesicle coat	5.93E-03
27	GO:0010008: endosome membrane	1.03E-02
28	GO:0005794: Golgi apparatus	1.15E-02
29	GO:0005905: clathrin-coated pit	1.23E-02
30	GO:0005802: trans-Golgi network	1.52E-02
31	GO:0005768: endosome	1.84E-02
32	GO:0031965: nuclear membrane	1.94E-02
33	GO:0048046: apoplast	2.18E-02
34	GO:0005778: peroxisomal membrane	2.43E-02
35	GO:0000786: nucleosome	3.66E-02
36	GO:0005773: vacuole	4.38E-02