co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G21380

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090279: regulation of calcium ion import	0.00E+00
2	GO:0032928: regulation of superoxide anion generation	0.00E+00
3	GO:1904526: regulation of microtubule binding	0.00E+00
4	GO:0071474: cellular hyperosmotic response	0.00E+00
5	GO:0070584: mitochondrion morphogenesis	0.00E+00
6	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
7	GO:0007172: signal complex assembly	0.00E+00
8	GO:0018023: peptidyl-lysine trimethylation	0.00E+00
9	GO:0015979: photosynthesis	8.23E-12
10	GO:0015995: chlorophyll biosynthetic process	1.20E-11
11	GO:0016122: xanthophyll metabolic process	4.79E-07
12	GO:0006782: protoporphyrinogen IX biosynthetic process	1.80E-06
13	GO:0009768: photosynthesis, light harvesting in photosystem I	1.02E-05
14	GO:0006783: heme biosynthetic process	8.24E-05
15	GO:0010480: microsporocyte differentiation	9.50E-05
16	GO:0010028: xanthophyll cycle	9.50E-05
17	GO:0006824: cobalt ion transport	9.50E-05
18	GO:0018298: protein-chromophore linkage	1.03E-04
19	GO:0010114: response to red light	2.07E-04
20	GO:0009934: regulation of meristem structural organization	2.13E-04
21	GO:0035304: regulation of protein dephosphorylation	2.24E-04
22	GO:1901679: nucleotide transmembrane transport	2.24E-04
23	GO:0018026: peptidyl-lysine monomethylation	2.24E-04
24	GO:0006521: regulation of cellular amino acid metabolic process	2.24E-04
25	GO:0051262: protein tetramerization	2.24E-04
26	GO:0034755: iron ion transmembrane transport	2.24E-04
27	GO:0080121: AMP transport	3.73E-04
28	GO:0051639: actin filament network formation	5.37E-04
29	GO:0042938: dipeptide transport	7.14E-04
30	GO:0051764: actin crosslink formation	7.14E-04
31	GO:0009765: photosynthesis, light harvesting	7.14E-04
32	GO:0015994: chlorophyll metabolic process	7.14E-04
33	GO:0015867: ATP transport	7.14E-04
34	GO:0010117: photoprotection	9.02E-04
35	GO:0006655: phosphatidylglycerol biosynthetic process	1.10E-03
36	GO:0015866: ADP transport	1.10E-03
37	GO:0042549: photosystem II stabilization	1.10E-03
38	GO:0035435: phosphate ion transmembrane transport	1.10E-03
39	GO:0009735: response to cytokinin	1.26E-03
40	GO:0045926: negative regulation of growth	1.31E-03
41	GO:0009942: longitudinal axis specification	1.31E-03
42	GO:0098655: cation transmembrane transport	1.31E-03
43	GO:0010189: vitamin E biosynthetic process	1.31E-03
44	GO:0071470: cellular response to osmotic stress	1.31E-03
45	GO:0010218: response to far red light	1.47E-03
46	GO:0009645: response to low light intensity stimulus	1.54E-03
47	GO:0051510: regulation of unidimensional cell growth	1.54E-03
48	GO:0080186: developmental vegetative growth	1.54E-03
49	GO:0048437: floral organ development	1.54E-03
50	GO:0010196: nonphotochemical quenching	1.54E-03
51	GO:0009769: photosynthesis, light harvesting in photosystem II	1.54E-03
52	GO:0050829: defense response to Gram-negative bacterium	1.54E-03
53	GO:0009637: response to blue light	1.68E-03
54	GO:0034599: cellular response to oxidative stress	1.75E-03
55	GO:0009787: regulation of abscisic acid-activated signaling pathway	1.78E-03
56	GO:0009642: response to light intensity	1.78E-03
57	GO:0006353: DNA-templated transcription, termination	1.78E-03
58	GO:0007389: pattern specification process	2.03E-03
59	GO:0007186: G-protein coupled receptor signaling pathway	2.03E-03
60	GO:0009657: plastid organization	2.03E-03
61	GO:0009640: photomorphogenesis	2.16E-03
62	GO:0098656: anion transmembrane transport	2.29E-03
63	GO:0048507: meristem development	2.29E-03
64	GO:0010205: photoinhibition	2.56E-03
65	GO:0006779: porphyrin-containing compound biosynthetic process	2.56E-03
66	GO:1900865: chloroplast RNA modification	2.56E-03
67	GO:0009688: abscisic acid biosynthetic process	2.85E-03
68	GO:0019684: photosynthesis, light reaction	3.14E-03
69	GO:0043085: positive regulation of catalytic activity	3.14E-03
70	GO:0048229: gametophyte development	3.14E-03
71	GO:0030148: sphingolipid biosynthetic process	3.14E-03
72	GO:0009773: photosynthetic electron transport in photosystem I	3.14E-03
73	GO:0015706: nitrate transport	3.44E-03
74	GO:0016024: CDP-diacylglycerol biosynthetic process	3.44E-03
75	GO:0006629: lipid metabolic process	3.56E-03
76	GO:0030048: actin filament-based movement	3.76E-03
77	GO:0010075: regulation of meristem growth	3.76E-03
78	GO:0006094: gluconeogenesis	3.76E-03
79	GO:0006468: protein phosphorylation	3.85E-03
80	GO:0010207: photosystem II assembly	4.08E-03
81	GO:0009887: animal organ morphogenesis	4.08E-03
82	GO:0006396: RNA processing	4.22E-03
83	GO:0009742: brassinosteroid mediated signaling pathway	4.34E-03
84	GO:0051017: actin filament bundle assembly	5.10E-03
85	GO:0006874: cellular calcium ion homeostasis	5.46E-03
86	GO:0007017: microtubule-based process	5.46E-03
87	GO:0009269: response to desiccation	5.83E-03
88	GO:0009686: gibberellin biosynthetic process	6.58E-03
89	GO:0070417: cellular response to cold	7.38E-03
90	GO:0048653: anther development	7.79E-03
91	GO:0007166: cell surface receptor signaling pathway	8.07E-03
92	GO:0006662: glycerol ether metabolic process	8.21E-03
93	GO:0009741: response to brassinosteroid	8.21E-03
94	GO:0010305: leaf vascular tissue pattern formation	8.21E-03
95	GO:0008380: RNA splicing	8.42E-03
96	GO:0008654: phospholipid biosynthetic process	9.06E-03
97	GO:0009791: post-embryonic development	9.06E-03
98	GO:0010193: response to ozone	9.51E-03
99	GO:0010583: response to cyclopentenone	9.96E-03
100	GO:0010252: auxin homeostasis	1.09E-02
101	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.40E-02
102	GO:0006811: ion transport	1.59E-02
103	GO:0007568: aging	1.65E-02
104	GO:0009910: negative regulation of flower development	1.65E-02
105	GO:0016051: carbohydrate biosynthetic process	1.76E-02
106	GO:0006839: mitochondrial transport	1.93E-02
107	GO:0006631: fatty acid metabolic process	1.99E-02
108	GO:0009926: auxin polar transport	2.10E-02
109	GO:0006397: mRNA processing	2.10E-02
110	GO:0048364: root development	2.10E-02
111	GO:0009644: response to high light intensity	2.23E-02
112	GO:0006364: rRNA processing	2.60E-02
113	GO:0010224: response to UV-B	2.67E-02
114	GO:0006857: oligopeptide transport	2.73E-02
115	GO:0006417: regulation of translation	2.80E-02
116	GO:0006096: glycolytic process	2.93E-02
117	GO:0043086: negative regulation of catalytic activity	2.93E-02
118	GO:0009740: gibberellic acid mediated signaling pathway	3.20E-02
119	GO:0042545: cell wall modification	3.27E-02
120	GO:0009416: response to light stimulus	3.56E-02
121	GO:0009845: seed germination	4.15E-02
122	GO:0009790: embryo development	4.38E-02
123	GO:0055085: transmembrane transport	4.51E-02
124	GO:0007623: circadian rhythm	4.93E-02
125	GO:0045490: pectin catabolic process	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0045550: geranylgeranyl reductase activity	0.00E+00
2	GO:0009899: ent-kaurene synthase activity	0.00E+00
3	GO:0046422: violaxanthin de-epoxidase activity	0.00E+00
4	GO:0004853: uroporphyrinogen decarboxylase activity	0.00E+00
5	GO:0031409: pigment binding	7.15E-06
6	GO:0004462: lactoylglutathione lyase activity	2.08E-05
7	GO:0016168: chlorophyll binding	7.50E-05
8	GO:0052631: sphingolipid delta-8 desaturase activity	9.50E-05
9	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	9.50E-05
10	GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity	9.50E-05
11	GO:0005227: calcium activated cation channel activity	9.50E-05
12	GO:0010242: oxygen evolving activity	9.50E-05
13	GO:0016630: protochlorophyllide reductase activity	2.24E-04
14	GO:0019172: glyoxalase III activity	2.24E-04
15	GO:0016868: intramolecular transferase activity, phosphotransferases	2.24E-04
16	GO:0033612: receptor serine/threonine kinase binding	3.65E-04
17	GO:0016805: dipeptidase activity	3.73E-04
18	GO:0004180: carboxypeptidase activity	3.73E-04
19	GO:0010277: chlorophyllide a oxygenase [overall] activity	3.73E-04
20	GO:0019201: nucleotide kinase activity	5.37E-04
21	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	5.37E-04
22	GO:0016851: magnesium chelatase activity	5.37E-04
23	GO:0019901: protein kinase binding	6.82E-04
24	GO:0009011: starch synthase activity	7.14E-04
25	GO:0016279: protein-lysine N-methyltransferase activity	7.14E-04
26	GO:0042936: dipeptide transporter activity	7.14E-04
27	GO:0004930: G-protein coupled receptor activity	7.14E-04
28	GO:0080122: AMP transmembrane transporter activity	9.02E-04
29	GO:0004605: phosphatidate cytidylyltransferase activity	1.10E-03
30	GO:0004332: fructose-bisphosphate aldolase activity	1.10E-03
31	GO:0004017: adenylate kinase activity	1.31E-03
32	GO:0005347: ATP transmembrane transporter activity	1.31E-03
33	GO:0015217: ADP transmembrane transporter activity	1.31E-03
34	GO:0005261: cation channel activity	1.31E-03
35	GO:0004525: ribonuclease III activity	1.78E-03
36	GO:0043621: protein self-association	2.33E-03
37	GO:0009672: auxin:proton symporter activity	2.56E-03
38	GO:0005381: iron ion transmembrane transporter activity	2.56E-03
39	GO:0008047: enzyme activator activity	2.85E-03
40	GO:0015020: glucuronosyltransferase activity	2.85E-03
41	GO:0047372: acylglycerol lipase activity	3.14E-03
42	GO:0008081: phosphoric diester hydrolase activity	3.76E-03
43	GO:0015114: phosphate ion transmembrane transporter activity	3.76E-03
44	GO:0010329: auxin efflux transmembrane transporter activity	3.76E-03
45	GO:0003774: motor activity	4.08E-03
46	GO:0008266: poly(U) RNA binding	4.08E-03
47	GO:0004970: ionotropic glutamate receptor activity	4.41E-03
48	GO:0005217: intracellular ligand-gated ion channel activity	4.41E-03
49	GO:0005216: ion channel activity	5.46E-03
50	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	6.58E-03
51	GO:0046910: pectinesterase inhibitor activity	6.58E-03
52	GO:0003727: single-stranded RNA binding	6.98E-03
53	GO:0047134: protein-disulfide reductase activity	7.38E-03
54	GO:0008536: Ran GTPase binding	8.21E-03
55	GO:0004791: thioredoxin-disulfide reductase activity	8.63E-03
56	GO:0005515: protein binding	1.03E-02
57	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.04E-02
58	GO:0051015: actin filament binding	1.04E-02
59	GO:0005200: structural constituent of cytoskeleton	1.14E-02
60	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.14E-02
61	GO:0016597: amino acid binding	1.18E-02
62	GO:0008375: acetylglucosaminyltransferase activity	1.33E-02
63	GO:0005215: transporter activity	2.05E-02
64	GO:0051537: 2 iron, 2 sulfur cluster binding	2.23E-02
65	GO:0003777: microtubule motor activity	2.80E-02
66	GO:0045330: aspartyl esterase activity	2.80E-02
67	GO:0004672: protein kinase activity	2.92E-02
68	GO:0030599: pectinesterase activity	3.20E-02
69	GO:0003779: actin binding	3.27E-02
70	GO:0015035: protein disulfide oxidoreductase activity	3.42E-02
71	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.00E-02
72	GO:0016829: lyase activity	4.15E-02
73	GO:0004252: serine-type endopeptidase activity	4.23E-02
74	GO:0004674: protein serine/threonine kinase activity	4.54E-02

Rank	GO Term	Adjusted P value
1	GO:0005943: phosphatidylinositol 3-kinase complex, class IA	0.00E+00
2	GO:0009534: chloroplast thylakoid	9.72E-20
3	GO:0009535: chloroplast thylakoid membrane	2.38E-16
4	GO:0009507: chloroplast	3.79E-15
5	GO:0009522: photosystem I	8.97E-09
6	GO:0009941: chloroplast envelope	2.98E-08
7	GO:0010287: plastoglobule	9.47E-08
8	GO:0009579: thylakoid	3.88E-07
9	GO:0009543: chloroplast thylakoid lumen	3.24E-06
10	GO:0030095: chloroplast photosystem II	4.80E-06
11	GO:0009517: PSII associated light-harvesting complex II	8.22E-06
12	GO:0009570: chloroplast stroma	1.04E-05
13	GO:0009538: photosystem I reaction center	5.25E-05
14	GO:0009783: photosystem II antenna complex	9.50E-05
15	GO:0031977: thylakoid lumen	1.85E-04
16	GO:0030093: chloroplast photosystem I	2.24E-04
17	GO:0030076: light-harvesting complex	2.41E-04
18	GO:0010007: magnesium chelatase complex	3.73E-04
19	GO:0042646: plastid nucleoid	5.37E-04
20	GO:0032432: actin filament bundle	5.37E-04
21	GO:0009523: photosystem II	6.82E-04
22	GO:0016021: integral component of membrane	6.90E-04
23	GO:0055035: plastid thylakoid membrane	9.02E-04
24	GO:0016363: nuclear matrix	1.31E-03
25	GO:0016020: membrane	2.04E-03
26	GO:0031969: chloroplast membrane	2.18E-03
27	GO:0045298: tubulin complex	2.29E-03
28	GO:0016459: myosin complex	2.85E-03
29	GO:0005884: actin filament	3.14E-03
30	GO:0009706: chloroplast inner membrane	4.10E-03
31	GO:0042651: thylakoid membrane	5.46E-03
32	GO:0009654: photosystem II oxygen evolving complex	5.46E-03
33	GO:0019898: extrinsic component of membrane	9.06E-03
34	GO:0071944: cell periphery	1.04E-02
35	GO:0030529: intracellular ribonucleoprotein complex	1.23E-02
36	GO:0009707: chloroplast outer membrane	1.49E-02
37	GO:0000325: plant-type vacuole	1.65E-02
38	GO:0005886: plasma membrane	1.82E-02
39	GO:0005789: endoplasmic reticulum membrane	3.07E-02
40	GO:0005623: cell	4.00E-02