co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G21370

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0017038: protein import	0.00E+00
2	GO:0000372: Group I intron splicing	0.00E+00
3	GO:0019323: pentose catabolic process	0.00E+00
4	GO:0044262: cellular carbohydrate metabolic process	1.21E-05
5	GO:0010028: xanthophyll cycle	1.21E-05
6	GO:0034337: RNA folding	1.21E-05
7	GO:0016122: xanthophyll metabolic process	3.21E-05
8	GO:0015979: photosynthesis	8.12E-05
9	GO:0009052: pentose-phosphate shunt, non-oxidative branch	8.79E-05
10	GO:0010109: regulation of photosynthesis	1.22E-04
11	GO:0015994: chlorophyll metabolic process	1.22E-04
12	GO:0006552: leucine catabolic process	1.22E-04
13	GO:0010438: cellular response to sulfur starvation	1.59E-04
14	GO:0006574: valine catabolic process	1.98E-04
15	GO:0009082: branched-chain amino acid biosynthetic process	2.39E-04
16	GO:1901259: chloroplast rRNA processing	2.39E-04
17	GO:0010439: regulation of glucosinolate biosynthetic process	3.27E-04
18	GO:0006605: protein targeting	3.27E-04
19	GO:0010492: maintenance of shoot apical meristem identity	3.27E-04
20	GO:0000373: Group II intron splicing	4.21E-04
21	GO:0048507: meristem development	4.21E-04
22	GO:0009682: induced systemic resistance	5.71E-04
23	GO:0030048: actin filament-based movement	6.76E-04
24	GO:0090351: seedling development	7.88E-04
25	GO:0009625: response to insect	1.14E-03
26	GO:0016117: carotenoid biosynthetic process	1.27E-03
27	GO:0009646: response to absence of light	1.47E-03
28	GO:0000302: response to reactive oxygen species	1.61E-03
29	GO:0010090: trichome morphogenesis	1.76E-03
30	GO:0010027: thylakoid membrane organization	2.06E-03
31	GO:0015995: chlorophyll biosynthetic process	2.30E-03
32	GO:0034599: cellular response to oxidative stress	2.97E-03
33	GO:0006631: fatty acid metabolic process	3.24E-03
34	GO:0051603: proteolysis involved in cellular protein catabolic process	4.30E-03
35	GO:0009624: response to nematode	5.34E-03
36	GO:0042744: hydrogen peroxide catabolic process	6.82E-03
37	GO:0010150: leaf senescence	7.79E-03
38	GO:0009451: RNA modification	7.92E-03
39	GO:0009739: response to gibberellin	8.43E-03
40	GO:0009617: response to bacterium	8.82E-03
41	GO:0009658: chloroplast organization	1.06E-02
42	GO:0009793: embryo development ending in seed dormancy	1.21E-02
43	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.26E-02
44	GO:0006886: intracellular protein transport	1.43E-02
45	GO:0009751: response to salicylic acid	1.61E-02
46	GO:0009408: response to heat	1.62E-02
47	GO:0006397: mRNA processing	1.67E-02
48	GO:0009753: response to jasmonic acid	1.71E-02
49	GO:0008152: metabolic process	1.74E-02
50	GO:0006357: regulation of transcription from RNA polymerase II promoter	1.98E-02
51	GO:0009611: response to wounding	2.48E-02
52	GO:0030154: cell differentiation	4.29E-02
53	GO:0055114: oxidation-reduction process	4.72E-02
54	GO:0015031: protein transport	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0046422: violaxanthin de-epoxidase activity	0.00E+00
2	GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity	0.00E+00
3	GO:0004750: ribulose-phosphate 3-epimerase activity	3.21E-05
4	GO:0015462: ATPase-coupled protein transmembrane transporter activity	5.78E-05
5	GO:0008893: guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity	8.79E-05
6	GO:0052656: L-isoleucine transaminase activity	8.79E-05
7	GO:0052654: L-leucine transaminase activity	8.79E-05
8	GO:0052655: L-valine transaminase activity	8.79E-05
9	GO:0016851: magnesium chelatase activity	8.79E-05
10	GO:0004084: branched-chain-amino-acid transaminase activity	1.22E-04
11	GO:0004130: cytochrome-c peroxidase activity	1.98E-04
12	GO:0004714: transmembrane receptor protein tyrosine kinase activity	3.27E-04
13	GO:0009982: pseudouridine synthase activity	6.76E-04
14	GO:0003774: motor activity	7.31E-04
15	GO:0004185: serine-type carboxypeptidase activity	3.43E-03
16	GO:0005198: structural molecule activity	3.71E-03
17	GO:0016874: ligase activity	5.13E-03
18	GO:0003824: catalytic activity	5.72E-03
19	GO:0019843: rRNA binding	6.23E-03
20	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	6.35E-03
21	GO:0020037: heme binding	8.22E-03
22	GO:0003723: RNA binding	8.48E-03
23	GO:0004601: peroxidase activity	1.06E-02
24	GO:0004497: monooxygenase activity	1.23E-02
25	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	1.40E-02
26	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	1.51E-02
27	GO:0019825: oxygen binding	3.14E-02
28	GO:0005506: iron ion binding	3.99E-02
29	GO:0044212: transcription regulatory region DNA binding	4.04E-02
30	GO:0005215: transporter activity	4.34E-02

Rank	GO Term	Adjusted P value
1	GO:0009534: chloroplast thylakoid	1.76E-08
2	GO:0009535: chloroplast thylakoid membrane	1.05E-06
3	GO:0009570: chloroplast stroma	1.59E-06
4	GO:0009507: chloroplast	4.03E-06
5	GO:0010007: magnesium chelatase complex	5.78E-05
6	GO:0009941: chloroplast envelope	1.07E-04
7	GO:0031977: thylakoid lumen	1.51E-04
8	GO:0009543: chloroplast thylakoid lumen	4.04E-04
9	GO:0016459: myosin complex	5.20E-04
10	GO:0032040: small-subunit processome	6.23E-04
11	GO:0030095: chloroplast photosystem II	7.31E-04
12	GO:0009532: plastid stroma	1.02E-03
13	GO:0009522: photosystem I	1.47E-03
14	GO:0010319: stromule	1.91E-03
15	GO:0030529: intracellular ribonucleoprotein complex	2.06E-03
16	GO:0009579: thylakoid	3.10E-03
17	GO:0009706: chloroplast inner membrane	5.34E-03
18	GO:0010287: plastoglobule	6.01E-03
19	GO:0031969: chloroplast membrane	1.23E-02
20	GO:0005840: ribosome	4.18E-02