co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G21330

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046471: phosphatidylglycerol metabolic process	0.00E+00
2	GO:0051775: response to redox state	1.21E-05
3	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	8.79E-05
4	GO:0006107: oxaloacetate metabolic process	8.79E-05
5	GO:0006734: NADH metabolic process	1.22E-04
6	GO:1901601: strigolactone biosynthetic process	1.22E-04
7	GO:0010236: plastoquinone biosynthetic process	1.59E-04
8	GO:0043097: pyrimidine nucleoside salvage	1.59E-04
9	GO:0045962: positive regulation of development, heterochronic	1.98E-04
10	GO:0006206: pyrimidine nucleobase metabolic process	1.98E-04
11	GO:0009854: oxidative photosynthetic carbon pathway	2.39E-04
12	GO:0071482: cellular response to light stimulus	3.73E-04
13	GO:0006098: pentose-phosphate shunt	4.21E-04
14	GO:0043085: positive regulation of catalytic activity	5.71E-04
15	GO:0018119: peptidyl-cysteine S-nitrosylation	5.71E-04
16	GO:0006108: malate metabolic process	6.76E-04
17	GO:0006094: gluconeogenesis	6.76E-04
18	GO:0010223: secondary shoot formation	7.31E-04
19	GO:0019253: reductive pentose-phosphate cycle	7.31E-04
20	GO:0006636: unsaturated fatty acid biosynthetic process	8.44E-04
21	GO:0008299: isoprenoid biosynthetic process	9.61E-04
22	GO:0030433: ubiquitin-dependent ERAD pathway	1.08E-03
23	GO:0006817: phosphate ion transport	1.21E-03
24	GO:0042631: cellular response to water deprivation	1.34E-03
25	GO:0006662: glycerol ether metabolic process	1.40E-03
26	GO:0009791: post-embryonic development	1.54E-03
27	GO:0009637: response to blue light	2.89E-03
28	GO:0009853: photorespiration	2.89E-03
29	GO:0034599: cellular response to oxidative stress	2.97E-03
30	GO:0006099: tricarboxylic acid cycle	2.97E-03
31	GO:0055114: oxidation-reduction process	3.28E-03
32	GO:0000209: protein polyubiquitination	3.52E-03
33	GO:0009965: leaf morphogenesis	3.71E-03
34	GO:0009585: red, far-red light phototransduction	4.20E-03
35	GO:0006096: glycolytic process	4.70E-03
36	GO:0009058: biosynthetic process	6.47E-03
37	GO:0009845: seed germination	6.58E-03
38	GO:0006810: transport	7.65E-03
39	GO:0009658: chloroplast organization	1.06E-02
40	GO:0048366: leaf development	1.19E-02
41	GO:0080167: response to karrikin	1.23E-02
42	GO:0010200: response to chitin	1.26E-02
43	GO:0015979: photosynthesis	1.35E-02
44	GO:0045454: cell redox homeostasis	1.40E-02
45	GO:0016042: lipid catabolic process	1.59E-02
46	GO:0008152: metabolic process	1.74E-02
47	GO:0009735: response to cytokinin	2.29E-02
48	GO:0006457: protein folding	2.94E-02
49	GO:0006414: translational elongation	3.25E-02
50	GO:0042742: defense response to bacterium	4.04E-02
51	GO:0030154: cell differentiation	4.29E-02

Rank	GO Term	Adjusted P value
1	GO:0008974: phosphoribulokinase activity	0.00E+00
2	GO:0008465: glycerate dehydrogenase activity	0.00E+00
3	GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity	0.00E+00
4	GO:0046554: malate dehydrogenase (NADP+) activity	0.00E+00
5	GO:0009673: low-affinity phosphate transmembrane transporter activity	0.00E+00
6	GO:0008746: NAD(P)+ transhydrogenase activity	1.21E-05
7	GO:0050347: trans-octaprenyltranstransferase activity	3.21E-05
8	GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity	3.21E-05
9	GO:0048038: quinone binding	4.67E-05
10	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.22E-04
11	GO:0016615: malate dehydrogenase activity	1.98E-04
12	GO:0004332: fructose-bisphosphate aldolase activity	1.98E-04
13	GO:0004849: uridine kinase activity	2.39E-04
14	GO:0030060: L-malate dehydrogenase activity	2.39E-04
15	GO:0008135: translation factor activity, RNA binding	3.73E-04
16	GO:0008047: enzyme activator activity	5.20E-04
17	GO:0005315: inorganic phosphate transmembrane transporter activity	6.76E-04
18	GO:0008266: poly(U) RNA binding	7.31E-04
19	GO:0047134: protein-disulfide reductase activity	1.27E-03
20	GO:0008080: N-acetyltransferase activity	1.40E-03
21	GO:0004791: thioredoxin-disulfide reductase activity	1.47E-03
22	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.76E-03
23	GO:0003746: translation elongation factor activity	2.89E-03
24	GO:0015293: symporter activity	3.71E-03
25	GO:0051287: NAD binding	3.90E-03
26	GO:0031625: ubiquitin protein ligase binding	4.50E-03
27	GO:0015035: protein disulfide oxidoreductase activity	5.45E-03
28	GO:0030170: pyridoxal phosphate binding	6.70E-03
29	GO:0042802: identical protein binding	9.21E-03
30	GO:0016788: hydrolase activity, acting on ester bonds	1.07E-02
31	GO:0061630: ubiquitin protein ligase activity	1.28E-02
32	GO:0052689: carboxylic ester hydrolase activity	1.32E-02
33	GO:0004871: signal transducer activity	1.45E-02
34	GO:0003924: GTPase activity	1.62E-02
35	GO:0016740: transferase activity	2.81E-02
36	GO:0005525: GTP binding	3.48E-02
37	GO:0016491: oxidoreductase activity	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	3.97E-09
2	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	3.31E-06
3	GO:0009579: thylakoid	2.13E-05
4	GO:0009570: chloroplast stroma	2.29E-05
5	GO:0048046: apoplast	6.20E-05
6	GO:0009941: chloroplast envelope	1.07E-04
7	GO:0009535: chloroplast thylakoid membrane	2.41E-04
8	GO:0010319: stromule	1.91E-03
9	GO:0005834: heterotrimeric G-protein complex	4.91E-03
10	GO:0009706: chloroplast inner membrane	5.34E-03
11	GO:0010287: plastoglobule	6.01E-03
12	GO:0009536: plastid	6.39E-03
13	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	1.13E-02
14	GO:0031969: chloroplast membrane	1.23E-02
15	GO:0005777: peroxisome	2.69E-02
16	GO:0009534: chloroplast thylakoid	2.79E-02