co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G20960

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042906: xanthine transport	0.00E+00
2	GO:1900490: positive regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity	0.00E+00
3	GO:0035494: SNARE complex disassembly	4.88E-05
4	GO:0006813: potassium ion transport	9.08E-05
5	GO:0015857: uracil transport	1.20E-04
6	GO:0000256: allantoin catabolic process	1.20E-04
7	GO:0035335: peptidyl-tyrosine dephosphorylation	1.20E-04
8	GO:0015720: allantoin transport	1.20E-04
9	GO:0030003: cellular cation homeostasis	1.20E-04
10	GO:0010136: ureide catabolic process	2.06E-04
11	GO:0030029: actin filament-based process	2.06E-04
12	GO:0071705: nitrogen compound transport	2.06E-04
13	GO:1901332: negative regulation of lateral root development	3.01E-04
14	GO:0006145: purine nucleobase catabolic process	3.01E-04
15	GO:0010222: stem vascular tissue pattern formation	4.04E-04
16	GO:0006370: 7-methylguanosine mRNA capping	4.04E-04
17	GO:0006970: response to osmotic stress	6.11E-04
18	GO:0006333: chromatin assembly or disassembly	8.75E-04
19	GO:0010044: response to aluminum ion	8.75E-04
20	GO:0009395: phospholipid catabolic process	8.75E-04
21	GO:0006491: N-glycan processing	1.01E-03
22	GO:0070413: trehalose metabolism in response to stress	1.01E-03
23	GO:0051603: proteolysis involved in cellular protein catabolic process	1.27E-03
24	GO:0034765: regulation of ion transmembrane transport	1.28E-03
25	GO:0010345: suberin biosynthetic process	1.28E-03
26	GO:0009641: shade avoidance	1.59E-03
27	GO:0046856: phosphatidylinositol dephosphorylation	1.75E-03
28	GO:0006816: calcium ion transport	1.75E-03
29	GO:0010143: cutin biosynthetic process	2.26E-03
30	GO:0010025: wax biosynthetic process	2.62E-03
31	GO:0005992: trehalose biosynthetic process	2.81E-03
32	GO:0009695: jasmonic acid biosynthetic process	3.01E-03
33	GO:0008299: isoprenoid biosynthetic process	3.01E-03
34	GO:0006874: cellular calcium ion homeostasis	3.01E-03
35	GO:0009269: response to desiccation	3.20E-03
36	GO:0030433: ubiquitin-dependent ERAD pathway	3.41E-03
37	GO:0009306: protein secretion	3.82E-03
38	GO:0042335: cuticle development	4.26E-03
39	GO:0061025: membrane fusion	4.71E-03
40	GO:0006814: sodium ion transport	4.71E-03
41	GO:0006635: fatty acid beta-oxidation	5.18E-03
42	GO:0006904: vesicle docking involved in exocytosis	6.16E-03
43	GO:0010286: heat acclimation	6.16E-03
44	GO:0071805: potassium ion transmembrane transport	6.16E-03
45	GO:0006950: response to stress	7.48E-03
46	GO:0009817: defense response to fungus, incompatible interaction	8.03E-03
47	GO:0006811: ion transport	8.60E-03
48	GO:0016051: carbohydrate biosynthetic process	9.47E-03
49	GO:0009640: photomorphogenesis	1.13E-02
50	GO:0000165: MAPK cascade	1.30E-02
51	GO:0035556: intracellular signal transduction	1.56E-02
52	GO:0006511: ubiquitin-dependent protein catabolic process	2.01E-02
53	GO:0009845: seed germination	2.23E-02
54	GO:0006508: proteolysis	2.44E-02
55	GO:0009651: response to salt stress	2.72E-02
56	GO:0009739: response to gibberellin	2.87E-02
57	GO:0009414: response to water deprivation	2.93E-02
58	GO:0010468: regulation of gene expression	3.00E-02
59	GO:0009723: response to ethylene	4.01E-02
60	GO:0010200: response to chitin	4.31E-02
61	GO:0044550: secondary metabolite biosynthetic process	4.47E-02
62	GO:0006886: intracellular protein transport	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0004482: mRNA (guanine-N7-)-methyltransferase activity	0.00E+00
2	GO:0005272: sodium channel activity	0.00E+00
3	GO:0042907: xanthine transmembrane transporter activity	0.00E+00
4	GO:0005267: potassium channel activity	2.37E-05
5	GO:0005244: voltage-gated ion channel activity	4.88E-05
6	GO:0008692: 3-hydroxybutyryl-CoA epimerase activity	4.88E-05
7	GO:0005274: allantoin uptake transmembrane transporter activity	1.20E-04
8	GO:0047216: inositol 3-alpha-galactosyltransferase activity	1.20E-04
9	GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity	1.20E-04
10	GO:0016314: phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity	1.20E-04
11	GO:0005483: soluble NSF attachment protein activity	2.06E-04
12	GO:0004848: ureidoglycolate hydrolase activity	2.06E-04
13	GO:0030527: structural constituent of chromatin	3.01E-04
14	GO:0004165: dodecenoyl-CoA delta-isomerase activity	3.01E-04
15	GO:0004300: enoyl-CoA hydratase activity	3.01E-04
16	GO:0052866: phosphatidylinositol phosphate phosphatase activity	3.01E-04
17	GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway	4.04E-04
18	GO:0019905: syntaxin binding	4.04E-04
19	GO:0015210: uracil transmembrane transporter activity	4.04E-04
20	GO:0070300: phosphatidic acid binding	7.50E-04
21	GO:0005261: cation channel activity	7.50E-04
22	GO:0000989: transcription factor activity, transcription factor binding	1.28E-03
23	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	1.28E-03
24	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	1.28E-03
25	GO:0004805: trehalose-phosphatase activity	1.59E-03
26	GO:0004842: ubiquitin-protein transferase activity	1.79E-03
27	GO:0005262: calcium channel activity	2.08E-03
28	GO:0004970: ionotropic glutamate receptor activity	2.44E-03
29	GO:0005217: intracellular ligand-gated ion channel activity	2.44E-03
30	GO:0004725: protein tyrosine phosphatase activity	2.62E-03
31	GO:0015079: potassium ion transmembrane transporter activity	3.01E-03
32	GO:0019706: protein-cysteine S-palmitoyltransferase activity	3.20E-03
33	GO:0004707: MAP kinase activity	3.20E-03
34	GO:0004197: cysteine-type endopeptidase activity	5.42E-03
35	GO:0016791: phosphatase activity	5.91E-03
36	GO:0005200: structural constituent of cytoskeleton	6.16E-03
37	GO:0008237: metallopeptidase activity	6.16E-03
38	GO:0003993: acid phosphatase activity	9.77E-03
39	GO:0043565: sequence-specific DNA binding	1.30E-02
40	GO:0008234: cysteine-type peptidase activity	1.50E-02
41	GO:0031625: ubiquitin protein ligase binding	1.50E-02
42	GO:0016758: transferase activity, transferring hexosyl groups	2.06E-02
43	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.14E-02
44	GO:0004252: serine-type endopeptidase activity	2.27E-02
45	GO:0016301: kinase activity	2.67E-02
46	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.14E-02
47	GO:0003824: catalytic activity	3.29E-02
48	GO:0016788: hydrolase activity, acting on ester bonds	3.66E-02
49	GO:0003682: chromatin binding	3.76E-02
50	GO:0004497: monooxygenase activity	4.21E-02
51	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0000323: lytic vacuole	3.01E-04
2	GO:0005764: lysosome	2.26E-03
3	GO:0030176: integral component of endoplasmic reticulum membrane	2.44E-03
4	GO:0016021: integral component of membrane	3.57E-03
5	GO:0005737: cytoplasm	5.14E-03
6	GO:0000785: chromatin	5.42E-03
7	GO:0000151: ubiquitin ligase complex	8.03E-03
8	GO:0031201: SNARE complex	1.07E-02
9	GO:0005773: vacuole	1.37E-02
10	GO:0005834: heterotrimeric G-protein complex	1.65E-02
11	GO:0005615: extracellular space	2.87E-02
12	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	3.86E-02
13	GO:0000139: Golgi membrane	4.05E-02