Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G20890

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009773: photosynthetic electron transport in photosystem I3.23E-09
2GO:0046520: sphingoid biosynthetic process5.34E-05
3GO:0071277: cellular response to calcium ion5.34E-05
4GO:0033481: galacturonate biosynthetic process5.34E-05
5GO:0010729: positive regulation of hydrogen peroxide biosynthetic process5.34E-05
6GO:0030388: fructose 1,6-bisphosphate metabolic process1.30E-04
7GO:0006518: peptide metabolic process2.22E-04
8GO:0006000: fructose metabolic process2.22E-04
9GO:0006165: nucleoside diphosphate phosphorylation3.25E-04
10GO:0006228: UTP biosynthetic process3.25E-04
11GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly3.25E-04
12GO:0006241: CTP biosynthetic process3.25E-04
13GO:2000122: negative regulation of stomatal complex development4.35E-04
14GO:0010037: response to carbon dioxide4.35E-04
15GO:0015976: carbon utilization4.35E-04
16GO:0006183: GTP biosynthetic process4.35E-04
17GO:0045727: positive regulation of translation4.35E-04
18GO:0016120: carotene biosynthetic process5.52E-04
19GO:0006656: phosphatidylcholine biosynthetic process5.52E-04
20GO:0018258: protein O-linked glycosylation via hydroxyproline6.76E-04
21GO:0010405: arabinogalactan protein metabolic process6.76E-04
22GO:0050829: defense response to Gram-negative bacterium9.40E-04
23GO:0015979: photosynthesis9.86E-04
24GO:0009704: de-etiolation1.08E-03
25GO:0032544: plastid translation1.23E-03
26GO:0006002: fructose 6-phosphate metabolic process1.23E-03
27GO:0090333: regulation of stomatal closure1.38E-03
28GO:0010205: photoinhibition1.54E-03
29GO:0009725: response to hormone2.25E-03
30GO:0006094: gluconeogenesis2.25E-03
31GO:0005986: sucrose biosynthetic process2.25E-03
32GO:0006810: transport2.33E-03
33GO:0019253: reductive pentose-phosphate cycle2.43E-03
34GO:0009735: response to cytokinin2.49E-03
35GO:0005985: sucrose metabolic process2.63E-03
36GO:0009225: nucleotide-sugar metabolic process2.63E-03
37GO:0006636: unsaturated fatty acid biosynthetic process2.83E-03
38GO:0006487: protein N-linked glycosylation3.03E-03
39GO:0031408: oxylipin biosynthetic process3.46E-03
40GO:0016998: cell wall macromolecule catabolic process3.46E-03
41GO:0061077: chaperone-mediated protein folding3.46E-03
42GO:0002229: defense response to oomycetes5.60E-03
43GO:0016132: brassinosteroid biosynthetic process5.60E-03
44GO:0048510: regulation of timing of transition from vegetative to reproductive phase5.60E-03
45GO:1901657: glycosyl compound metabolic process6.12E-03
46GO:0016126: sterol biosynthetic process7.22E-03
47GO:0042128: nitrate assimilation7.79E-03
48GO:0010411: xyloglucan metabolic process8.09E-03
49GO:0006869: lipid transport8.28E-03
50GO:0018298: protein-chromophore linkage8.68E-03
51GO:0009817: defense response to fungus, incompatible interaction8.68E-03
52GO:0000160: phosphorelay signal transduction system8.99E-03
53GO:0010119: regulation of stomatal movement9.61E-03
54GO:0005975: carbohydrate metabolic process1.16E-02
55GO:0009640: photomorphogenesis1.23E-02
56GO:0009744: response to sucrose1.23E-02
57GO:0042546: cell wall biogenesis1.26E-02
58GO:0009644: response to high light intensity1.30E-02
59GO:0006855: drug transmembrane transport1.37E-02
60GO:0006364: rRNA processing1.51E-02
61GO:0009736: cytokinin-activated signaling pathway1.51E-02
62GO:0006857: oligopeptide transport1.59E-02
63GO:0018105: peptidyl-serine phosphorylation1.98E-02
64GO:0007623: circadian rhythm2.87E-02
65GO:0006470: protein dephosphorylation3.15E-02
66GO:0071555: cell wall organization3.36E-02
67GO:0006979: response to oxidative stress3.38E-02
68GO:0009826: unidimensional cell growth3.81E-02
69GO:0009658: chloroplast organization3.91E-02
70GO:0009409: response to cold4.53E-02
71GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.67E-02
72GO:0046777: protein autophosphorylation4.78E-02
RankGO TermAdjusted P value
1GO:0052667: phosphomethylethanolamine N-methyltransferase activity0.00E+00
2GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity0.00E+00
3GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity0.00E+00
4GO:1990534: thermospermine oxidase activity0.00E+00
5GO:0000248: C-5 sterol desaturase activity5.34E-05
6GO:0000170: sphingosine hydroxylase activity5.34E-05
7GO:0000234: phosphoethanolamine N-methyltransferase activity1.30E-04
8GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity1.30E-04
9GO:0042284: sphingolipid delta-4 desaturase activity1.30E-04
10GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity3.25E-04
11GO:0004550: nucleoside diphosphate kinase activity3.25E-04
12GO:0050378: UDP-glucuronate 4-epimerase activity4.35E-04
13GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor4.35E-04
14GO:1990714: hydroxyproline O-galactosyltransferase activity6.76E-04
15GO:0004723: calcium-dependent protein serine/threonine phosphatase activity8.05E-04
16GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water1.23E-03
17GO:0004089: carbonate dehydratase activity2.25E-03
18GO:0031072: heat shock protein binding2.25E-03
19GO:0004565: beta-galactosidase activity2.25E-03
20GO:0008266: poly(U) RNA binding2.43E-03
21GO:0008131: primary amine oxidase activity2.43E-03
22GO:0005528: FK506 binding3.03E-03
23GO:0022891: substrate-specific transmembrane transporter activity3.90E-03
24GO:0050662: coenzyme binding5.09E-03
25GO:0004872: receptor activity5.34E-03
26GO:0016762: xyloglucan:xyloglucosyl transferase activity5.60E-03
27GO:0048038: quinone binding5.60E-03
28GO:0000156: phosphorelay response regulator activity6.12E-03
29GO:0016759: cellulose synthase activity6.39E-03
30GO:0016722: oxidoreductase activity, oxidizing metal ions6.66E-03
31GO:0016168: chlorophyll binding7.50E-03
32GO:0003824: catalytic activity7.65E-03
33GO:0008375: acetylglucosaminyltransferase activity7.79E-03
34GO:0009931: calcium-dependent protein serine/threonine kinase activity7.79E-03
35GO:0004683: calmodulin-dependent protein kinase activity8.09E-03
36GO:0016798: hydrolase activity, acting on glycosyl bonds8.09E-03
37GO:0102483: scopolin beta-glucosidase activity8.09E-03
38GO:0015238: drug transmembrane transporter activity8.99E-03
39GO:0004222: metalloendopeptidase activity9.30E-03
40GO:0016491: oxidoreductase activity9.64E-03
41GO:0008422: beta-glucosidase activity1.09E-02
42GO:0008289: lipid binding1.30E-02
43GO:0015293: symporter activity1.33E-02
44GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.37E-02
45GO:0003690: double-stranded DNA binding1.55E-02
46GO:0030599: pectinesterase activity1.86E-02
47GO:0051082: unfolded protein binding1.94E-02
48GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.19E-02
49GO:0030246: carbohydrate binding2.23E-02
50GO:0016758: transferase activity, transferring hexosyl groups2.24E-02
51GO:0019843: rRNA binding2.28E-02
52GO:0015297: antiporter activity2.77E-02
53GO:0016757: transferase activity, transferring glycosyl groups3.19E-02
54GO:0005506: iron ion binding3.30E-02
55GO:0005215: transporter activity3.71E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast1.06E-10
2GO:0009535: chloroplast thylakoid membrane9.47E-10
3GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)2.45E-07
4GO:0048046: apoplast1.77E-06
5GO:0016021: integral component of membrane2.90E-06
6GO:0009534: chloroplast thylakoid6.77E-06
7GO:0009579: thylakoid7.91E-05
8GO:0010319: stromule4.47E-04
9GO:0031969: chloroplast membrane8.38E-04
10GO:0009941: chloroplast envelope9.31E-04
11GO:0010287: plastoglobule2.28E-03
12GO:0009543: chloroplast thylakoid lumen2.41E-03
13GO:0005758: mitochondrial intermembrane space3.03E-03
14GO:0042651: thylakoid membrane3.24E-03
15GO:0046658: anchored component of plasma membrane4.36E-03
16GO:0009523: photosystem II5.34E-03
17GO:0032580: Golgi cisterna membrane6.39E-03
18GO:0015934: large ribosomal subunit9.61E-03
19GO:0005618: cell wall1.05E-02
20GO:0031977: thylakoid lumen1.16E-02
21GO:0009706: chloroplast inner membrane1.94E-02
22GO:0009570: chloroplast stroma2.23E-02
23GO:0031225: anchored component of membrane2.59E-02
24GO:0005794: Golgi apparatus3.60E-02
25GO:0000139: Golgi membrane4.53E-02
Gene type



Gene DE type