GO Enrichment Analysis of Co-expressed Genes with
AT2G20060
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 2 | GO:0019918: peptidyl-arginine methylation, to symmetrical-dimethyl arginine | 0.00E+00 |
| 3 | GO:0072321: chaperone-mediated protein transport | 0.00E+00 |
| 4 | GO:0071433: cell wall repair | 0.00E+00 |
| 5 | GO:1904874: positive regulation of telomerase RNA localization to Cajal body | 0.00E+00 |
| 6 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 7 | GO:0046686: response to cadmium ion | 8.37E-09 |
| 8 | GO:0006626: protein targeting to mitochondrion | 3.43E-08 |
| 9 | GO:0006412: translation | 4.14E-07 |
| 10 | GO:0006457: protein folding | 4.75E-07 |
| 11 | GO:0002181: cytoplasmic translation | 1.76E-06 |
| 12 | GO:0007005: mitochondrion organization | 1.34E-05 |
| 13 | GO:0042254: ribosome biogenesis | 2.09E-05 |
| 14 | GO:1990258: histone glutamine methylation | 9.33E-05 |
| 15 | GO:0031120: snRNA pseudouridine synthesis | 9.33E-05 |
| 16 | GO:0031118: rRNA pseudouridine synthesis | 9.33E-05 |
| 17 | GO:0048448: stamen morphogenesis | 9.33E-05 |
| 18 | GO:0006177: GMP biosynthetic process | 9.33E-05 |
| 19 | GO:0010450: inflorescence meristem growth | 9.33E-05 |
| 20 | GO:0000494: box C/D snoRNA 3'-end processing | 9.33E-05 |
| 21 | GO:0006820: anion transport | 1.59E-04 |
| 22 | GO:0010220: positive regulation of vernalization response | 2.20E-04 |
| 23 | GO:0048833: specification of floral organ number | 2.20E-04 |
| 24 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.20E-04 |
| 25 | GO:0000027: ribosomal large subunit assembly | 2.93E-04 |
| 26 | GO:0006334: nucleosome assembly | 3.56E-04 |
| 27 | GO:0055074: calcium ion homeostasis | 3.67E-04 |
| 28 | GO:1902626: assembly of large subunit precursor of preribosome | 3.67E-04 |
| 29 | GO:0045039: protein import into mitochondrial inner membrane | 3.67E-04 |
| 30 | GO:0015696: ammonium transport | 5.28E-04 |
| 31 | GO:0007004: telomere maintenance via telomerase | 5.28E-04 |
| 32 | GO:0010197: polar nucleus fusion | 5.80E-04 |
| 33 | GO:0009408: response to heat | 5.88E-04 |
| 34 | GO:0009651: response to salt stress | 5.88E-04 |
| 35 | GO:0000460: maturation of 5.8S rRNA | 7.02E-04 |
| 36 | GO:0072488: ammonium transmembrane transport | 7.02E-04 |
| 37 | GO:0006544: glycine metabolic process | 8.88E-04 |
| 38 | GO:0031167: rRNA methylation | 8.88E-04 |
| 39 | GO:0009793: embryo development ending in seed dormancy | 1.02E-03 |
| 40 | GO:0006563: L-serine metabolic process | 1.08E-03 |
| 41 | GO:0000470: maturation of LSU-rRNA | 1.08E-03 |
| 42 | GO:0009423: chorismate biosynthetic process | 1.29E-03 |
| 43 | GO:0016444: somatic cell DNA recombination | 1.29E-03 |
| 44 | GO:0009955: adaxial/abaxial pattern specification | 1.29E-03 |
| 45 | GO:1901001: negative regulation of response to salt stress | 1.29E-03 |
| 46 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 1.29E-03 |
| 47 | GO:0042255: ribosome assembly | 1.75E-03 |
| 48 | GO:0001522: pseudouridine synthesis | 1.75E-03 |
| 49 | GO:0050821: protein stabilization | 1.75E-03 |
| 50 | GO:0009880: embryonic pattern specification | 2.00E-03 |
| 51 | GO:0001510: RNA methylation | 2.00E-03 |
| 52 | GO:0006189: 'de novo' IMP biosynthetic process | 2.25E-03 |
| 53 | GO:0098656: anion transmembrane transport | 2.25E-03 |
| 54 | GO:0035999: tetrahydrofolate interconversion | 2.52E-03 |
| 55 | GO:0010162: seed dormancy process | 2.80E-03 |
| 56 | GO:0006364: rRNA processing | 2.82E-03 |
| 57 | GO:0009073: aromatic amino acid family biosynthetic process | 3.09E-03 |
| 58 | GO:0006913: nucleocytoplasmic transport | 3.09E-03 |
| 59 | GO:0048467: gynoecium development | 4.01E-03 |
| 60 | GO:0034976: response to endoplasmic reticulum stress | 4.67E-03 |
| 61 | GO:0030150: protein import into mitochondrial matrix | 5.01E-03 |
| 62 | GO:0009944: polarity specification of adaxial/abaxial axis | 5.01E-03 |
| 63 | GO:0015992: proton transport | 5.72E-03 |
| 64 | GO:0015031: protein transport | 5.82E-03 |
| 65 | GO:0030433: ubiquitin-dependent ERAD pathway | 6.09E-03 |
| 66 | GO:0009294: DNA mediated transformation | 6.47E-03 |
| 67 | GO:0008033: tRNA processing | 7.65E-03 |
| 68 | GO:0048868: pollen tube development | 8.06E-03 |
| 69 | GO:0080156: mitochondrial mRNA modification | 9.33E-03 |
| 70 | GO:0032502: developmental process | 9.78E-03 |
| 71 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.05E-02 |
| 72 | GO:0009567: double fertilization forming a zygote and endosperm | 1.07E-02 |
| 73 | GO:0010286: heat acclimation | 1.11E-02 |
| 74 | GO:0009615: response to virus | 1.21E-02 |
| 75 | GO:0016049: cell growth | 1.41E-02 |
| 76 | GO:0046777: protein autophosphorylation | 1.42E-02 |
| 77 | GO:0010311: lateral root formation | 1.51E-02 |
| 78 | GO:0006811: ion transport | 1.56E-02 |
| 79 | GO:0048527: lateral root development | 1.62E-02 |
| 80 | GO:0010043: response to zinc ion | 1.62E-02 |
| 81 | GO:0000724: double-strand break repair via homologous recombination | 1.67E-02 |
| 82 | GO:0008283: cell proliferation | 2.07E-02 |
| 83 | GO:0009965: leaf morphogenesis | 2.24E-02 |
| 84 | GO:0000154: rRNA modification | 2.24E-02 |
| 85 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.62E-02 |
| 86 | GO:0009909: regulation of flower development | 2.75E-02 |
| 87 | GO:0016569: covalent chromatin modification | 3.15E-02 |
| 88 | GO:0009735: response to cytokinin | 3.18E-02 |
| 89 | GO:0009553: embryo sac development | 3.21E-02 |
| 90 | GO:0009624: response to nematode | 3.28E-02 |
| 91 | GO:0018105: peptidyl-serine phosphorylation | 3.35E-02 |
| 92 | GO:0009555: pollen development | 3.47E-02 |
| 93 | GO:0009845: seed germination | 4.07E-02 |
| 94 | GO:0006413: translational initiation | 4.61E-02 |
| 95 | GO:0040008: regulation of growth | 4.69E-02 |
| 96 | GO:0009451: RNA modification | 4.92E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034513: box H/ACA snoRNA binding | 0.00E+00 |
| 2 | GO:0004107: chorismate synthase activity | 0.00E+00 |
| 3 | GO:0003735: structural constituent of ribosome | 2.23E-09 |
| 4 | GO:0051082: unfolded protein binding | 5.06E-08 |
| 5 | GO:0030515: snoRNA binding | 2.84E-07 |
| 6 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 3.57E-06 |
| 7 | GO:0004298: threonine-type endopeptidase activity | 1.15E-05 |
| 8 | GO:0003723: RNA binding | 1.96E-05 |
| 9 | GO:0015288: porin activity | 5.09E-05 |
| 10 | GO:0008308: voltage-gated anion channel activity | 6.46E-05 |
| 11 | GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity | 9.33E-05 |
| 12 | GO:1990259: histone-glutamine methyltransferase activity | 9.33E-05 |
| 13 | GO:0004638: phosphoribosylaminoimidazole carboxylase activity | 9.33E-05 |
| 14 | GO:0003746: translation elongation factor activity | 1.40E-04 |
| 15 | GO:0043021: ribonucleoprotein complex binding | 2.20E-04 |
| 16 | GO:0003938: IMP dehydrogenase activity | 2.20E-04 |
| 17 | GO:0070034: telomerase RNA binding | 2.20E-04 |
| 18 | GO:0008233: peptidase activity | 3.11E-04 |
| 19 | GO:0008649: rRNA methyltransferase activity | 3.67E-04 |
| 20 | GO:0070180: large ribosomal subunit rRNA binding | 3.67E-04 |
| 21 | GO:0008469: histone-arginine N-methyltransferase activity | 3.67E-04 |
| 22 | GO:0008276: protein methyltransferase activity | 5.28E-04 |
| 23 | GO:0004372: glycine hydroxymethyltransferase activity | 8.88E-04 |
| 24 | GO:0008519: ammonium transmembrane transporter activity | 1.08E-03 |
| 25 | GO:0003697: single-stranded DNA binding | 1.64E-03 |
| 26 | GO:0042393: histone binding | 1.86E-03 |
| 27 | GO:0008135: translation factor activity, RNA binding | 2.00E-03 |
| 28 | GO:0015266: protein channel activity | 3.69E-03 |
| 29 | GO:0031072: heat shock protein binding | 3.69E-03 |
| 30 | GO:0019843: rRNA binding | 4.99E-03 |
| 31 | GO:0004407: histone deacetylase activity | 5.01E-03 |
| 32 | GO:0005528: FK506 binding | 5.01E-03 |
| 33 | GO:0004540: ribonuclease activity | 5.72E-03 |
| 34 | GO:0003756: protein disulfide isomerase activity | 6.85E-03 |
| 35 | GO:0000166: nucleotide binding | 7.13E-03 |
| 36 | GO:0003729: mRNA binding | 7.39E-03 |
| 37 | GO:0010181: FMN binding | 8.47E-03 |
| 38 | GO:0016853: isomerase activity | 8.47E-03 |
| 39 | GO:0008237: metallopeptidase activity | 1.11E-02 |
| 40 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.31E-02 |
| 41 | GO:0005525: GTP binding | 1.34E-02 |
| 42 | GO:0004683: calmodulin-dependent protein kinase activity | 1.36E-02 |
| 43 | GO:0005509: calcium ion binding | 1.58E-02 |
| 44 | GO:0050897: cobalt ion binding | 1.62E-02 |
| 45 | GO:0005524: ATP binding | 1.66E-02 |
| 46 | GO:0003924: GTPase activity | 1.96E-02 |
| 47 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.31E-02 |
| 48 | GO:0030170: pyridoxal phosphate binding | 4.15E-02 |
| 49 | GO:0008565: protein transporter activity | 4.38E-02 |
| 50 | GO:0005507: copper ion binding | 4.92E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042719: mitochondrial intermembrane space protein transporter complex | 0.00E+00 |
| 2 | GO:0072589: box H/ACA scaRNP complex | 0.00E+00 |
| 3 | GO:0090661: box H/ACA telomerase RNP complex | 0.00E+00 |
| 4 | GO:0005730: nucleolus | 1.79E-13 |
| 5 | GO:0005774: vacuolar membrane | 2.68E-11 |
| 6 | GO:0005829: cytosol | 8.44E-10 |
| 7 | GO:0022625: cytosolic large ribosomal subunit | 1.16E-07 |
| 8 | GO:0022626: cytosolic ribosome | 1.47E-07 |
| 9 | GO:0005840: ribosome | 2.48E-07 |
| 10 | GO:0005773: vacuole | 4.55E-07 |
| 11 | GO:0005739: mitochondrion | 1.10E-06 |
| 12 | GO:0009506: plasmodesma | 7.42E-06 |
| 13 | GO:0005758: mitochondrial intermembrane space | 8.21E-06 |
| 14 | GO:0005839: proteasome core complex | 1.15E-05 |
| 15 | GO:0031428: box C/D snoRNP complex | 2.01E-05 |
| 16 | GO:0046930: pore complex | 6.46E-05 |
| 17 | GO:0019773: proteasome core complex, alpha-subunit complex | 6.46E-05 |
| 18 | GO:0005742: mitochondrial outer membrane translocase complex | 6.46E-05 |
| 19 | GO:0005788: endoplasmic reticulum lumen | 7.21E-05 |
| 20 | GO:0015030: Cajal body | 9.72E-05 |
| 21 | GO:0032040: small-subunit processome | 1.59E-04 |
| 22 | GO:0070545: PeBoW complex | 2.20E-04 |
| 23 | GO:0005737: cytoplasm | 2.29E-04 |
| 24 | GO:0000502: proteasome complex | 2.99E-04 |
| 25 | GO:0005741: mitochondrial outer membrane | 3.56E-04 |
| 26 | GO:0005747: mitochondrial respiratory chain complex I | 3.89E-04 |
| 27 | GO:0005743: mitochondrial inner membrane | 5.26E-04 |
| 28 | GO:0031429: box H/ACA snoRNP complex | 5.28E-04 |
| 29 | GO:0005759: mitochondrial matrix | 8.33E-04 |
| 30 | GO:0005618: cell wall | 8.48E-04 |
| 31 | GO:0005762: mitochondrial large ribosomal subunit | 1.29E-03 |
| 32 | GO:0030687: preribosome, large subunit precursor | 1.51E-03 |
| 33 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 1.80E-03 |
| 34 | GO:0005852: eukaryotic translation initiation factor 3 complex | 3.09E-03 |
| 35 | GO:0009508: plastid chromosome | 3.69E-03 |
| 36 | GO:0009536: plastid | 5.52E-03 |
| 37 | GO:0005783: endoplasmic reticulum | 8.96E-03 |
| 38 | GO:0022627: cytosolic small ribosomal subunit | 9.11E-03 |
| 39 | GO:0016592: mediator complex | 9.78E-03 |
| 40 | GO:0009295: nucleoid | 1.11E-02 |
| 41 | GO:0015934: large ribosomal subunit | 1.62E-02 |
| 42 | GO:0005886: plasma membrane | 1.64E-02 |
| 43 | GO:0009507: chloroplast | 1.90E-02 |
| 44 | GO:0005635: nuclear envelope | 2.68E-02 |
| 45 | GO:0005834: heterotrimeric G-protein complex | 3.01E-02 |
| 46 | GO:0005654: nucleoplasm | 3.78E-02 |