GO Enrichment Analysis of Co-expressed Genes with
AT2G19940
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 2 | GO:0006412: translation | 1.40E-16 |
| 3 | GO:0042254: ribosome biogenesis | 6.73E-09 |
| 4 | GO:0032544: plastid translation | 7.21E-09 |
| 5 | GO:0009735: response to cytokinin | 4.70E-07 |
| 6 | GO:1901599: (-)-pinoresinol biosynthetic process | 1.20E-04 |
| 7 | GO:0042371: vitamin K biosynthetic process | 1.20E-04 |
| 8 | GO:0060627: regulation of vesicle-mediated transport | 1.20E-04 |
| 9 | GO:0010424: DNA methylation on cytosine within a CG sequence | 2.77E-04 |
| 10 | GO:0010069: zygote asymmetric cytokinesis in embryo sac | 2.77E-04 |
| 11 | GO:0044208: 'de novo' AMP biosynthetic process | 2.77E-04 |
| 12 | GO:0006696: ergosterol biosynthetic process | 4.58E-04 |
| 13 | GO:0006065: UDP-glucuronate biosynthetic process | 4.58E-04 |
| 14 | GO:0006424: glutamyl-tRNA aminoacylation | 6.57E-04 |
| 15 | GO:0046739: transport of virus in multicellular host | 6.57E-04 |
| 16 | GO:0006241: CTP biosynthetic process | 6.57E-04 |
| 17 | GO:0006165: nucleoside diphosphate phosphorylation | 6.57E-04 |
| 18 | GO:0006228: UTP biosynthetic process | 6.57E-04 |
| 19 | GO:0045454: cell redox homeostasis | 7.15E-04 |
| 20 | GO:0009956: radial pattern formation | 8.72E-04 |
| 21 | GO:0006183: GTP biosynthetic process | 8.72E-04 |
| 22 | GO:0032543: mitochondrial translation | 1.10E-03 |
| 23 | GO:0007094: mitotic spindle assembly checkpoint | 1.10E-03 |
| 24 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.35E-03 |
| 25 | GO:0045490: pectin catabolic process | 1.42E-03 |
| 26 | GO:0006694: steroid biosynthetic process | 1.61E-03 |
| 27 | GO:0010555: response to mannitol | 1.61E-03 |
| 28 | GO:0009955: adaxial/abaxial pattern specification | 1.61E-03 |
| 29 | GO:1901259: chloroplast rRNA processing | 1.61E-03 |
| 30 | GO:0050790: regulation of catalytic activity | 1.89E-03 |
| 31 | GO:0009642: response to light intensity | 2.19E-03 |
| 32 | GO:0009808: lignin metabolic process | 2.50E-03 |
| 33 | GO:0010497: plasmodesmata-mediated intercellular transport | 2.50E-03 |
| 34 | GO:0010206: photosystem II repair | 2.82E-03 |
| 35 | GO:0006189: 'de novo' IMP biosynthetic process | 2.82E-03 |
| 36 | GO:0048589: developmental growth | 2.82E-03 |
| 37 | GO:0006349: regulation of gene expression by genetic imprinting | 3.16E-03 |
| 38 | GO:0007346: regulation of mitotic cell cycle | 3.16E-03 |
| 39 | GO:0006949: syncytium formation | 3.51E-03 |
| 40 | GO:0018119: peptidyl-cysteine S-nitrosylation | 3.88E-03 |
| 41 | GO:0010216: maintenance of DNA methylation | 3.88E-03 |
| 42 | GO:0010015: root morphogenesis | 3.88E-03 |
| 43 | GO:0009807: lignan biosynthetic process | 3.88E-03 |
| 44 | GO:0006364: rRNA processing | 3.93E-03 |
| 45 | GO:0006869: lipid transport | 4.56E-03 |
| 46 | GO:0009933: meristem structural organization | 5.04E-03 |
| 47 | GO:0019344: cysteine biosynthetic process | 6.32E-03 |
| 48 | GO:0000027: ribosomal large subunit assembly | 6.32E-03 |
| 49 | GO:0007010: cytoskeleton organization | 6.32E-03 |
| 50 | GO:0042742: defense response to bacterium | 6.77E-03 |
| 51 | GO:0061077: chaperone-mediated protein folding | 7.22E-03 |
| 52 | GO:0048278: vesicle docking | 7.22E-03 |
| 53 | GO:0030245: cellulose catabolic process | 7.69E-03 |
| 54 | GO:0009294: DNA mediated transformation | 8.18E-03 |
| 55 | GO:0009411: response to UV | 8.18E-03 |
| 56 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 8.18E-03 |
| 57 | GO:0019722: calcium-mediated signaling | 8.66E-03 |
| 58 | GO:0000413: protein peptidyl-prolyl isomerization | 9.68E-03 |
| 59 | GO:0042335: cuticle development | 9.68E-03 |
| 60 | GO:0010305: leaf vascular tissue pattern formation | 1.02E-02 |
| 61 | GO:0061025: membrane fusion | 1.07E-02 |
| 62 | GO:0016132: brassinosteroid biosynthetic process | 1.18E-02 |
| 63 | GO:0010583: response to cyclopentenone | 1.24E-02 |
| 64 | GO:0007264: small GTPase mediated signal transduction | 1.24E-02 |
| 65 | GO:0009828: plant-type cell wall loosening | 1.36E-02 |
| 66 | GO:0007267: cell-cell signaling | 1.41E-02 |
| 67 | GO:0009826: unidimensional cell growth | 1.44E-02 |
| 68 | GO:0010027: thylakoid membrane organization | 1.54E-02 |
| 69 | GO:0006906: vesicle fusion | 1.66E-02 |
| 70 | GO:0010411: xyloglucan metabolic process | 1.72E-02 |
| 71 | GO:0015995: chlorophyll biosynthetic process | 1.72E-02 |
| 72 | GO:0009817: defense response to fungus, incompatible interaction | 1.85E-02 |
| 73 | GO:0048767: root hair elongation | 1.92E-02 |
| 74 | GO:0009813: flavonoid biosynthetic process | 1.92E-02 |
| 75 | GO:0009834: plant-type secondary cell wall biogenesis | 1.99E-02 |
| 76 | GO:0007568: aging | 2.05E-02 |
| 77 | GO:0009910: negative regulation of flower development | 2.05E-02 |
| 78 | GO:0006886: intracellular protein transport | 2.30E-02 |
| 79 | GO:0006839: mitochondrial transport | 2.41E-02 |
| 80 | GO:0006887: exocytosis | 2.48E-02 |
| 81 | GO:0006631: fatty acid metabolic process | 2.48E-02 |
| 82 | GO:0042542: response to hydrogen peroxide | 2.55E-02 |
| 83 | GO:0051707: response to other organism | 2.63E-02 |
| 84 | GO:0042546: cell wall biogenesis | 2.70E-02 |
| 85 | GO:0055114: oxidation-reduction process | 2.85E-02 |
| 86 | GO:0009664: plant-type cell wall organization | 3.09E-02 |
| 87 | GO:0042538: hyperosmotic salinity response | 3.09E-02 |
| 88 | GO:0009809: lignin biosynthetic process | 3.25E-02 |
| 89 | GO:0009585: red, far-red light phototransduction | 3.25E-02 |
| 90 | GO:0006813: potassium ion transport | 3.25E-02 |
| 91 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.33E-02 |
| 92 | GO:0009409: response to cold | 3.89E-02 |
| 93 | GO:0016569: covalent chromatin modification | 4.00E-02 |
| 94 | GO:0009416: response to light stimulus | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 2 | GO:0050614: delta24-sterol reductase activity | 0.00E+00 |
| 3 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 4 | GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity | 0.00E+00 |
| 5 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 0.00E+00 |
| 6 | GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | 0.00E+00 |
| 7 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 8 | GO:0003735: structural constituent of ribosome | 1.76E-19 |
| 9 | GO:0019843: rRNA binding | 2.66E-15 |
| 10 | GO:0051920: peroxiredoxin activity | 1.18E-09 |
| 11 | GO:0016209: antioxidant activity | 4.25E-09 |
| 12 | GO:0030570: pectate lyase activity | 2.70E-05 |
| 13 | GO:0004018: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity | 1.20E-04 |
| 14 | GO:0042349: guiding stereospecific synthesis activity | 1.20E-04 |
| 15 | GO:0070626: (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity | 1.20E-04 |
| 16 | GO:0004560: alpha-L-fucosidase activity | 1.20E-04 |
| 17 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 2.77E-04 |
| 18 | GO:0004601: peroxidase activity | 3.90E-04 |
| 19 | GO:0005504: fatty acid binding | 4.58E-04 |
| 20 | GO:0030267: glyoxylate reductase (NADP) activity | 4.58E-04 |
| 21 | GO:0003979: UDP-glucose 6-dehydrogenase activity | 4.58E-04 |
| 22 | GO:0004550: nucleoside diphosphate kinase activity | 6.57E-04 |
| 23 | GO:0045430: chalcone isomerase activity | 8.72E-04 |
| 24 | GO:0004040: amidase activity | 1.10E-03 |
| 25 | GO:0008200: ion channel inhibitor activity | 1.35E-03 |
| 26 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 1.61E-03 |
| 27 | GO:0003886: DNA (cytosine-5-)-methyltransferase activity | 1.61E-03 |
| 28 | GO:0052747: sinapyl alcohol dehydrogenase activity | 2.19E-03 |
| 29 | GO:0030674: protein binding, bridging | 2.19E-03 |
| 30 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.41E-03 |
| 31 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 4.26E-03 |
| 32 | GO:0031072: heat shock protein binding | 4.64E-03 |
| 33 | GO:0003924: GTPase activity | 5.29E-03 |
| 34 | GO:0005528: FK506 binding | 6.32E-03 |
| 35 | GO:0008324: cation transmembrane transporter activity | 6.76E-03 |
| 36 | GO:0016829: lyase activity | 7.55E-03 |
| 37 | GO:0008289: lipid binding | 8.05E-03 |
| 38 | GO:0008810: cellulase activity | 8.18E-03 |
| 39 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.18E-02 |
| 40 | GO:0005200: structural constituent of cytoskeleton | 1.41E-02 |
| 41 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 1.41E-02 |
| 42 | GO:0008168: methyltransferase activity | 1.44E-02 |
| 43 | GO:0016788: hydrolase activity, acting on ester bonds | 1.52E-02 |
| 44 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.72E-02 |
| 45 | GO:0008236: serine-type peptidase activity | 1.79E-02 |
| 46 | GO:0052689: carboxylic ester hydrolase activity | 2.05E-02 |
| 47 | GO:0030145: manganese ion binding | 2.05E-02 |
| 48 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 2.05E-02 |
| 49 | GO:0005525: GTP binding | 2.06E-02 |
| 50 | GO:0000149: SNARE binding | 2.33E-02 |
| 51 | GO:0004185: serine-type carboxypeptidase activity | 2.63E-02 |
| 52 | GO:0005484: SNAP receptor activity | 2.63E-02 |
| 53 | GO:0009055: electron carrier activity | 2.94E-02 |
| 54 | GO:0051287: NAD binding | 3.01E-02 |
| 55 | GO:0045735: nutrient reservoir activity | 3.66E-02 |
| 56 | GO:0004650: polygalacturonase activity | 3.91E-02 |
| 57 | GO:0030599: pectinesterase activity | 4.00E-02 |
| 58 | GO:0022857: transmembrane transporter activity | 4.00E-02 |
| 59 | GO:0051082: unfolded protein binding | 4.17E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 0.00E+00 |
| 2 | GO:0044391: ribosomal subunit | 0.00E+00 |
| 3 | GO:0009570: chloroplast stroma | 5.51E-28 |
| 4 | GO:0009941: chloroplast envelope | 3.11E-18 |
| 5 | GO:0005840: ribosome | 1.55E-16 |
| 6 | GO:0009507: chloroplast | 4.88E-16 |
| 7 | GO:0009579: thylakoid | 3.25E-10 |
| 8 | GO:0048046: apoplast | 4.33E-10 |
| 9 | GO:0046658: anchored component of plasma membrane | 1.91E-06 |
| 10 | GO:0009534: chloroplast thylakoid | 1.51E-05 |
| 11 | GO:0031977: thylakoid lumen | 1.73E-05 |
| 12 | GO:0009505: plant-type cell wall | 1.93E-05 |
| 13 | GO:0031225: anchored component of membrane | 3.26E-05 |
| 14 | GO:0009543: chloroplast thylakoid lumen | 1.09E-04 |
| 15 | GO:0015934: large ribosomal subunit | 1.97E-04 |
| 16 | GO:0000311: plastid large ribosomal subunit | 2.26E-04 |
| 17 | GO:0005576: extracellular region | 3.29E-04 |
| 18 | GO:0005618: cell wall | 5.41E-04 |
| 19 | GO:0005828: kinetochore microtubule | 8.72E-04 |
| 20 | GO:0000776: kinetochore | 1.10E-03 |
| 21 | GO:0010319: stromule | 1.24E-03 |
| 22 | GO:0000777: condensed chromosome kinetochore | 1.61E-03 |
| 23 | GO:0010369: chromocenter | 1.61E-03 |
| 24 | GO:0009535: chloroplast thylakoid membrane | 1.89E-03 |
| 25 | GO:0009533: chloroplast stromal thylakoid | 1.89E-03 |
| 26 | GO:0022626: cytosolic ribosome | 2.17E-03 |
| 27 | GO:0009539: photosystem II reaction center | 2.50E-03 |
| 28 | GO:0016020: membrane | 2.66E-03 |
| 29 | GO:0005763: mitochondrial small ribosomal subunit | 2.82E-03 |
| 30 | GO:0005876: spindle microtubule | 3.16E-03 |
| 31 | GO:0022625: cytosolic large ribosomal subunit | 3.44E-03 |
| 32 | GO:0000312: plastid small ribosomal subunit | 5.04E-03 |
| 33 | GO:0005875: microtubule associated complex | 5.88E-03 |
| 34 | GO:0009654: photosystem II oxygen evolving complex | 6.76E-03 |
| 35 | GO:0015935: small ribosomal subunit | 7.22E-03 |
| 36 | GO:0009536: plastid | 9.23E-03 |
| 37 | GO:0009506: plasmodesma | 9.42E-03 |
| 38 | GO:0009504: cell plate | 1.13E-02 |
| 39 | GO:0009295: nucleoid | 1.41E-02 |
| 40 | GO:0031201: SNARE complex | 2.48E-02 |
| 41 | GO:0005856: cytoskeleton | 2.85E-02 |
| 42 | GO:0005635: nuclear envelope | 3.41E-02 |
| 43 | GO:0012505: endomembrane system | 4.09E-02 |
| 44 | GO:0009706: chloroplast inner membrane | 4.17E-02 |
| 45 | GO:0010287: plastoglobule | 4.71E-02 |