co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G18350

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009877: nodulation	0.00E+00
2	GO:0030644: cellular chloride ion homeostasis	0.00E+00
3	GO:1903508: positive regulation of nucleic acid-templated transcription	0.00E+00
4	GO:1903428: positive regulation of reactive oxygen species biosynthetic process	0.00E+00
5	GO:0009768: photosynthesis, light harvesting in photosystem I	2.11E-14
6	GO:0018298: protein-chromophore linkage	5.96E-10
7	GO:0009645: response to low light intensity stimulus	6.46E-10
8	GO:0009644: response to high light intensity	3.92E-09
9	GO:0010114: response to red light	1.61E-07
10	GO:0015979: photosynthesis	1.61E-06
11	GO:0010218: response to far red light	2.75E-06
12	GO:0009769: photosynthesis, light harvesting in photosystem II	3.00E-05
13	GO:0007623: circadian rhythm	7.12E-05
14	GO:0015812: gamma-aminobutyric acid transport	7.90E-05
15	GO:0009637: response to blue light	1.02E-04
16	GO:0009416: response to light stimulus	1.63E-04
17	GO:0051170: nuclear import	1.89E-04
18	GO:1902884: positive regulation of response to oxidative stress	1.89E-04
19	GO:0006883: cellular sodium ion homeostasis	1.89E-04
20	GO:0080167: response to karrikin	2.24E-04
21	GO:0003333: amino acid transmembrane transport	2.86E-04
22	GO:0048511: rhythmic process	2.86E-04
23	GO:0010017: red or far-red light signaling pathway	3.14E-04
24	GO:1902448: positive regulation of shade avoidance	3.17E-04
25	GO:0006598: polyamine catabolic process	3.17E-04
26	GO:1901562: response to paraquat	3.17E-04
27	GO:0044211: CTP salvage	4.58E-04
28	GO:0031936: negative regulation of chromatin silencing	4.58E-04
29	GO:0010600: regulation of auxin biosynthetic process	6.09E-04
30	GO:0044206: UMP salvage	6.09E-04
31	GO:1901002: positive regulation of response to salt stress	6.09E-04
32	GO:0015846: polyamine transport	6.09E-04
33	GO:0030104: water homeostasis	6.09E-04
34	GO:0009765: photosynthesis, light harvesting	6.09E-04
35	GO:2000306: positive regulation of photomorphogenesis	6.09E-04
36	GO:0043097: pyrimidine nucleoside salvage	7.72E-04
37	GO:0016123: xanthophyll biosynthetic process	7.72E-04
38	GO:0045962: positive regulation of development, heterochronic	9.42E-04
39	GO:0006206: pyrimidine nucleobase metabolic process	9.42E-04
40	GO:0009635: response to herbicide	9.42E-04
41	GO:0009409: response to cold	1.04E-03
42	GO:0000160: phosphorelay signal transduction system	1.11E-03
43	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	1.12E-03
44	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	1.12E-03
45	GO:0080111: DNA demethylation	1.31E-03
46	GO:0010161: red light signaling pathway	1.31E-03
47	GO:0010928: regulation of auxin mediated signaling pathway	1.51E-03
48	GO:0010078: maintenance of root meristem identity	1.51E-03
49	GO:0009704: de-etiolation	1.51E-03
50	GO:0009640: photomorphogenesis	1.70E-03
51	GO:0009827: plant-type cell wall modification	1.72E-03
52	GO:0010099: regulation of photomorphogenesis	1.72E-03
53	GO:0008643: carbohydrate transport	1.83E-03
54	GO:0090333: regulation of stomatal closure	1.95E-03
55	GO:0045892: negative regulation of transcription, DNA-templated	2.04E-03
56	GO:0048354: mucilage biosynthetic process involved in seed coat development	2.18E-03
57	GO:0055062: phosphate ion homeostasis	2.41E-03
58	GO:0009688: abscisic acid biosynthetic process	2.41E-03
59	GO:0009641: shade avoidance	2.41E-03
60	GO:0006629: lipid metabolic process	2.61E-03
61	GO:0030148: sphingolipid biosynthetic process	2.66E-03
62	GO:0046856: phosphatidylinositol dephosphorylation	2.66E-03
63	GO:0016925: protein sumoylation	2.92E-03
64	GO:0050826: response to freezing	3.18E-03
65	GO:0018107: peptidyl-threonine phosphorylation	3.18E-03
66	GO:0009718: anthocyanin-containing compound biosynthetic process	3.18E-03
67	GO:0009767: photosynthetic electron transport chain	3.18E-03
68	GO:0009266: response to temperature stimulus	3.45E-03
69	GO:0019853: L-ascorbic acid biosynthetic process	3.73E-03
70	GO:0090351: seedling development	3.73E-03
71	GO:0009735: response to cytokinin	4.81E-03
72	GO:0009269: response to desiccation	4.92E-03
73	GO:0010431: seed maturation	4.92E-03
74	GO:0071215: cellular response to abscisic acid stimulus	5.56E-03
75	GO:0006012: galactose metabolic process	5.56E-03
76	GO:0045492: xylan biosynthetic process	5.89E-03
77	GO:0006351: transcription, DNA-templated	5.95E-03
78	GO:0070417: cellular response to cold	6.22E-03
79	GO:0010182: sugar mediated signaling pathway	6.92E-03
80	GO:0055114: oxidation-reduction process	6.98E-03
81	GO:0006814: sodium ion transport	7.28E-03
82	GO:0006355: regulation of transcription, DNA-templated	8.67E-03
83	GO:1901657: glycosyl compound metabolic process	8.77E-03
84	GO:0019760: glucosinolate metabolic process	9.16E-03
85	GO:0010286: heat acclimation	9.56E-03
86	GO:0016579: protein deubiquitination	9.96E-03
87	GO:0044550: secondary metabolite biosynthetic process	1.15E-02
88	GO:0015995: chlorophyll biosynthetic process	1.16E-02
89	GO:0048573: photoperiodism, flowering	1.16E-02
90	GO:0009813: flavonoid biosynthetic process	1.29E-02
91	GO:0010119: regulation of stomatal movement	1.38E-02
92	GO:0006865: amino acid transport	1.43E-02
93	GO:0009408: response to heat	1.57E-02
94	GO:0051707: response to other organism	1.77E-02
95	GO:0009965: leaf morphogenesis	1.92E-02
96	GO:0006812: cation transport	2.08E-02
97	GO:0042538: hyperosmotic salinity response	2.08E-02
98	GO:0009585: red, far-red light phototransduction	2.19E-02
99	GO:0009909: regulation of flower development	2.35E-02
100	GO:0009624: response to nematode	2.81E-02
101	GO:0018105: peptidyl-serine phosphorylation	2.87E-02
102	GO:0009737: response to abscisic acid	3.41E-02
103	GO:0009058: biosynthetic process	3.42E-02
104	GO:0055085: transmembrane transport	3.54E-02
105	GO:0010228: vegetative to reproductive phase transition of meristem	4.28E-02
106	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	4.49E-02

Rank	GO Term	Adjusted P value
1	GO:0004567: beta-mannosidase activity	0.00E+00
2	GO:0080082: esculin beta-glucosidase activity	0.00E+00
3	GO:0015038: glutathione disulfide oxidoreductase activity	0.00E+00
4	GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity	0.00E+00
5	GO:0047668: amygdalin beta-glucosidase activity	0.00E+00
6	GO:0019912: cyclin-dependent protein kinase activating kinase activity	0.00E+00
7	GO:0080083: beta-gentiobiose beta-glucosidase activity	0.00E+00
8	GO:0009540: zeaxanthin epoxidase [overall] activity	0.00E+00
9	GO:0030504: inorganic diphosphate transmembrane transporter activity	0.00E+00
10	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
11	GO:0031409: pigment binding	1.97E-12
12	GO:0016168: chlorophyll binding	2.94E-10
13	GO:0015297: antiporter activity	6.54E-05
14	GO:0046872: metal ion binding	7.03E-05
15	GO:0052631: sphingolipid delta-8 desaturase activity	7.90E-05
16	GO:0015185: gamma-aminobutyric acid transmembrane transporter activity	7.90E-05
17	GO:0080079: cellobiose glucosidase activity	7.90E-05
18	GO:0015180: L-alanine transmembrane transporter activity	1.89E-04
19	GO:0080045: quercetin 3'-O-glucosyltransferase activity	1.89E-04
20	GO:0046592: polyamine oxidase activity	3.17E-04
21	GO:0019948: SUMO activating enzyme activity	3.17E-04
22	GO:0015181: arginine transmembrane transporter activity	4.58E-04
23	GO:0015203: polyamine transmembrane transporter activity	4.58E-04
24	GO:0015189: L-lysine transmembrane transporter activity	4.58E-04
25	GO:0005313: L-glutamate transmembrane transporter activity	6.09E-04
26	GO:0004845: uracil phosphoribosyltransferase activity	6.09E-04
27	GO:0000156: phosphorelay response regulator activity	6.54E-04
28	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	7.72E-04
29	GO:0080046: quercetin 4'-O-glucosyltransferase activity	9.42E-04
30	GO:0004849: uridine kinase activity	1.12E-03
31	GO:0004033: aldo-keto reductase (NADP) activity	1.51E-03
32	GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity	1.72E-03
33	GO:0015293: symporter activity	1.90E-03
34	GO:0071949: FAD binding	1.95E-03
35	GO:0000989: transcription factor activity, transcription factor binding	1.95E-03
36	GO:0005515: protein binding	1.95E-03
37	GO:0015174: basic amino acid transmembrane transporter activity	2.18E-03
38	GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity	2.41E-03
39	GO:0015171: amino acid transmembrane transporter activity	2.51E-03
40	GO:0047372: acylglycerol lipase activity	2.66E-03
41	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	2.92E-03
42	GO:0004565: beta-galactosidase activity	3.18E-03
43	GO:0004022: alcohol dehydrogenase (NAD) activity	3.18E-03
44	GO:0005315: inorganic phosphate transmembrane transporter activity	3.18E-03
45	GO:0008131: primary amine oxidase activity	3.45E-03
46	GO:0003712: transcription cofactor activity	3.73E-03
47	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.12E-03
48	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	4.92E-03
49	GO:0005351: sugar:proton symporter activity	5.40E-03
50	GO:0008514: organic anion transmembrane transporter activity	5.89E-03
51	GO:0004843: thiol-dependent ubiquitin-specific protease activity	8.01E-03
52	GO:0016787: hydrolase activity	9.17E-03
53	GO:0004497: monooxygenase activity	1.06E-02
54	GO:0102483: scopolin beta-glucosidase activity	1.16E-02
55	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	1.34E-02
56	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.48E-02
57	GO:0008422: beta-glucosidase activity	1.57E-02
58	GO:0042393: histone binding	1.62E-02
59	GO:0051537: 2 iron, 2 sulfur cluster binding	1.87E-02
60	GO:0005198: structural molecule activity	1.92E-02
61	GO:0031625: ubiquitin protein ligase binding	2.35E-02
62	GO:0045735: nutrient reservoir activity	2.46E-02
63	GO:0080043: quercetin 3-O-glucosyltransferase activity	2.63E-02
64	GO:0080044: quercetin 7-O-glucosyltransferase activity	2.63E-02
65	GO:0016874: ligase activity	2.69E-02
66	GO:0022857: transmembrane transporter activity	2.69E-02
67	GO:0008270: zinc ion binding	2.78E-02
68	GO:0003700: transcription factor activity, sequence-specific DNA binding	2.87E-02
69	GO:0015035: protein disulfide oxidoreductase activity	2.87E-02
70	GO:0015144: carbohydrate transmembrane transporter activity	3.75E-02
71	GO:0019825: oxygen binding	3.96E-02
72	GO:0003677: DNA binding	4.11E-02
73	GO:0008194: UDP-glycosyltransferase activity	4.49E-02

Rank	GO Term	Adjusted P value
1	GO:0009522: photosystem I	3.30E-13
2	GO:0030076: light-harvesting complex	2.52E-10
3	GO:0010287: plastoglobule	1.04E-09
4	GO:0009535: chloroplast thylakoid membrane	1.18E-09
5	GO:0009941: chloroplast envelope	6.50E-09
6	GO:0009579: thylakoid	7.69E-09
7	GO:0009534: chloroplast thylakoid	1.52E-07
8	GO:0009523: photosystem II	4.47E-07
9	GO:0009507: chloroplast	4.44E-04
10	GO:0009898: cytoplasmic side of plasma membrane	6.09E-04
11	GO:0009517: PSII associated light-harvesting complex II	6.09E-04
12	GO:0016021: integral component of membrane	1.23E-03
13	GO:0009538: photosystem I reaction center	1.51E-03
14	GO:0016020: membrane	2.14E-03
15	GO:0042651: thylakoid membrane	4.61E-03
16	GO:0031969: chloroplast membrane	1.06E-02
17	GO:0000151: ubiquitin ligase complex	1.25E-02
18	GO:0031966: mitochondrial membrane	2.08E-02
19	GO:0005887: integral component of plasma membrane	2.13E-02
20	GO:0016607: nuclear speck	2.52E-02
21	GO:0009706: chloroplast inner membrane	2.81E-02
22	GO:0005777: peroxisome	3.20E-02
23	GO:0005623: cell	3.36E-02
24	GO:0005622: intracellular	4.92E-02