GO Enrichment Analysis of Co-expressed Genes with
AT2G17980
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010111: glyoxysome organization | 0.00E+00 |
| 2 | GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase | 0.00E+00 |
| 3 | GO:2001253: regulation of histone H3-K36 trimethylation | 0.00E+00 |
| 4 | GO:0006987: activation of signaling protein activity involved in unfolded protein response | 0.00E+00 |
| 5 | GO:0010793: regulation of mRNA export from nucleus | 0.00E+00 |
| 6 | GO:0033539: fatty acid beta-oxidation using acyl-CoA dehydrogenase | 0.00E+00 |
| 7 | GO:0006422: aspartyl-tRNA aminoacylation | 3.37E-05 |
| 8 | GO:0019544: arginine catabolic process to glutamate | 3.37E-05 |
| 9 | GO:0050684: regulation of mRNA processing | 8.48E-05 |
| 10 | GO:0006212: uracil catabolic process | 8.48E-05 |
| 11 | GO:0007584: response to nutrient | 8.48E-05 |
| 12 | GO:0019483: beta-alanine biosynthetic process | 8.48E-05 |
| 13 | GO:0019395: fatty acid oxidation | 8.48E-05 |
| 14 | GO:0032784: regulation of DNA-templated transcription, elongation | 1.47E-04 |
| 15 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 1.96E-04 |
| 16 | GO:0010107: potassium ion import | 2.95E-04 |
| 17 | GO:0042176: regulation of protein catabolic process | 4.63E-04 |
| 18 | GO:0007035: vacuolar acidification | 4.63E-04 |
| 19 | GO:0006574: valine catabolic process | 4.63E-04 |
| 20 | GO:0071470: cellular response to osmotic stress | 5.53E-04 |
| 21 | GO:0048280: vesicle fusion with Golgi apparatus | 5.53E-04 |
| 22 | GO:0000209: protein polyubiquitination | 6.14E-04 |
| 23 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 6.47E-04 |
| 24 | GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway | 6.47E-04 |
| 25 | GO:0006397: mRNA processing | 6.90E-04 |
| 26 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 7.10E-04 |
| 27 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 7.44E-04 |
| 28 | GO:0006102: isocitrate metabolic process | 7.44E-04 |
| 29 | GO:0016559: peroxisome fission | 7.44E-04 |
| 30 | GO:0030968: endoplasmic reticulum unfolded protein response | 8.45E-04 |
| 31 | GO:0043562: cellular response to nitrogen levels | 8.45E-04 |
| 32 | GO:0006098: pentose-phosphate shunt | 9.49E-04 |
| 33 | GO:0006896: Golgi to vacuole transport | 1.17E-03 |
| 34 | GO:0030148: sphingolipid biosynthetic process | 1.28E-03 |
| 35 | GO:0010105: negative regulation of ethylene-activated signaling pathway | 1.40E-03 |
| 36 | GO:0000266: mitochondrial fission | 1.40E-03 |
| 37 | GO:0006829: zinc II ion transport | 1.52E-03 |
| 38 | GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process | 1.52E-03 |
| 39 | GO:0055046: microgametogenesis | 1.52E-03 |
| 40 | GO:0009695: jasmonic acid biosynthetic process | 2.19E-03 |
| 41 | GO:0008380: RNA splicing | 2.21E-03 |
| 42 | GO:0031408: oxylipin biosynthetic process | 2.33E-03 |
| 43 | GO:0051260: protein homooligomerization | 2.33E-03 |
| 44 | GO:0016226: iron-sulfur cluster assembly | 2.48E-03 |
| 45 | GO:0007005: mitochondrion organization | 2.48E-03 |
| 46 | GO:0009561: megagametogenesis | 2.78E-03 |
| 47 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 2.94E-03 |
| 48 | GO:0042147: retrograde transport, endosome to Golgi | 2.94E-03 |
| 49 | GO:0008284: positive regulation of cell proliferation | 2.94E-03 |
| 50 | GO:0015991: ATP hydrolysis coupled proton transport | 3.09E-03 |
| 51 | GO:0010118: stomatal movement | 3.09E-03 |
| 52 | GO:0071472: cellular response to salt stress | 3.25E-03 |
| 53 | GO:0046323: glucose import | 3.25E-03 |
| 54 | GO:0006623: protein targeting to vacuole | 3.59E-03 |
| 55 | GO:0006891: intra-Golgi vesicle-mediated transport | 3.76E-03 |
| 56 | GO:0006635: fatty acid beta-oxidation | 3.76E-03 |
| 57 | GO:0009630: gravitropism | 3.93E-03 |
| 58 | GO:0009816: defense response to bacterium, incompatible interaction | 5.02E-03 |
| 59 | GO:0006888: ER to Golgi vesicle-mediated transport | 5.40E-03 |
| 60 | GO:0010311: lateral root formation | 5.99E-03 |
| 61 | GO:0009853: photorespiration | 6.82E-03 |
| 62 | GO:0006099: tricarboxylic acid cycle | 7.04E-03 |
| 63 | GO:0030001: metal ion transport | 7.47E-03 |
| 64 | GO:0006813: potassium ion transport | 1.00E-02 |
| 65 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.03E-02 |
| 66 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.25E-02 |
| 67 | GO:0016567: protein ubiquitination | 1.32E-02 |
| 68 | GO:0051726: regulation of cell cycle | 1.34E-02 |
| 69 | GO:0009742: brassinosteroid mediated signaling pathway | 1.34E-02 |
| 70 | GO:0006970: response to osmotic stress | 2.72E-02 |
| 71 | GO:0009723: response to ethylene | 2.87E-02 |
| 72 | GO:0046686: response to cadmium ion | 2.91E-02 |
| 73 | GO:0010200: response to chitin | 3.08E-02 |
| 74 | GO:0046777: protein autophosphorylation | 3.16E-02 |
| 75 | GO:0045892: negative regulation of transcription, DNA-templated | 3.46E-02 |
| 76 | GO:0006886: intracellular protein transport | 3.50E-02 |
| 77 | GO:0009751: response to salicylic acid | 3.93E-02 |
| 78 | GO:0009737: response to abscisic acid | 3.97E-02 |
| 79 | GO:0009793: embryo development ending in seed dormancy | 4.31E-02 |
| 80 | GO:0009873: ethylene-activated signaling pathway | 4.76E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0017113: dihydropyrimidine dehydrogenase (NADP+) activity | 0.00E+00 |
| 2 | GO:0015575: mannitol transmembrane transporter activity | 0.00E+00 |
| 3 | GO:0015591: D-ribose transmembrane transporter activity | 0.00E+00 |
| 4 | GO:0015148: D-xylose transmembrane transporter activity | 0.00E+00 |
| 5 | GO:0016603: glutaminyl-peptide cyclotransferase activity | 0.00E+00 |
| 6 | GO:0005365: myo-inositol transmembrane transporter activity | 0.00E+00 |
| 7 | GO:0015576: sorbitol transmembrane transporter activity | 0.00E+00 |
| 8 | GO:0004815: aspartate-tRNA ligase activity | 3.37E-05 |
| 9 | GO:0000386: second spliceosomal transesterification activity | 3.37E-05 |
| 10 | GO:0015168: glycerol transmembrane transporter activity | 3.37E-05 |
| 11 | GO:0003988: acetyl-CoA C-acyltransferase activity | 8.48E-05 |
| 12 | GO:0045140: inositol phosphoceramide synthase activity | 8.48E-05 |
| 13 | GO:0004450: isocitrate dehydrogenase (NADP+) activity | 8.48E-05 |
| 14 | GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity | 1.47E-04 |
| 15 | GO:0005354: galactose transmembrane transporter activity | 2.18E-04 |
| 16 | GO:0008453: alanine-glyoxylate transaminase activity | 2.95E-04 |
| 17 | GO:0015145: monosaccharide transmembrane transporter activity | 3.77E-04 |
| 18 | GO:0070696: transmembrane receptor protein serine/threonine kinase binding | 3.77E-04 |
| 19 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 5.53E-04 |
| 20 | GO:0003730: mRNA 3'-UTR binding | 5.53E-04 |
| 21 | GO:0051287: NAD binding | 7.10E-04 |
| 22 | GO:0005267: potassium channel activity | 8.45E-04 |
| 23 | GO:0015078: hydrogen ion transmembrane transporter activity | 8.45E-04 |
| 24 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 9.49E-04 |
| 25 | GO:0030234: enzyme regulator activity | 1.17E-03 |
| 26 | GO:0046961: proton-transporting ATPase activity, rotational mechanism | 1.28E-03 |
| 27 | GO:0004521: endoribonuclease activity | 1.40E-03 |
| 28 | GO:0031624: ubiquitin conjugating enzyme binding | 1.65E-03 |
| 29 | GO:0051536: iron-sulfur cluster binding | 2.05E-03 |
| 30 | GO:0003727: single-stranded RNA binding | 2.78E-03 |
| 31 | GO:0005249: voltage-gated potassium channel activity | 3.09E-03 |
| 32 | GO:0001085: RNA polymerase II transcription factor binding | 3.25E-03 |
| 33 | GO:0046873: metal ion transmembrane transporter activity | 3.25E-03 |
| 34 | GO:0050660: flavin adenine dinucleotide binding | 3.29E-03 |
| 35 | GO:0005355: glucose transmembrane transporter activity | 3.42E-03 |
| 36 | GO:0004872: receptor activity | 3.59E-03 |
| 37 | GO:0061630: ubiquitin protein ligase activity | 3.71E-03 |
| 38 | GO:0003729: mRNA binding | 5.32E-03 |
| 39 | GO:0009055: electron carrier activity | 5.56E-03 |
| 40 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 6.40E-03 |
| 41 | GO:0003746: translation elongation factor activity | 6.82E-03 |
| 42 | GO:0000149: SNARE binding | 7.25E-03 |
| 43 | GO:0051539: 4 iron, 4 sulfur cluster binding | 7.47E-03 |
| 44 | GO:0005484: SNAP receptor activity | 8.14E-03 |
| 45 | GO:0030170: pyridoxal phosphate binding | 1.62E-02 |
| 46 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 1.65E-02 |
| 47 | GO:0015144: carbohydrate transmembrane transporter activity | 1.71E-02 |
| 48 | GO:0005351: sugar:proton symporter activity | 1.86E-02 |
| 49 | GO:0042802: identical protein binding | 2.24E-02 |
| 50 | GO:0004674: protein serine/threonine kinase activity | 2.42E-02 |
| 51 | GO:0000287: magnesium ion binding | 2.55E-02 |
| 52 | GO:0003682: chromatin binding | 2.69E-02 |
| 53 | GO:0042803: protein homodimerization activity | 3.54E-02 |
| 54 | GO:0003723: RNA binding | 4.29E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008541: proteasome regulatory particle, lid subcomplex | 3.02E-05 |
| 2 | GO:0032783: ELL-EAF complex | 3.37E-05 |
| 3 | GO:0042406: extrinsic component of endoplasmic reticulum membrane | 1.47E-04 |
| 4 | GO:0008076: voltage-gated potassium channel complex | 2.18E-04 |
| 5 | GO:0033179: proton-transporting V-type ATPase, V0 domain | 2.95E-04 |
| 6 | GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain | 3.77E-04 |
| 7 | GO:0030140: trans-Golgi network transport vesicle | 4.63E-04 |
| 8 | GO:0031902: late endosome membrane | 5.47E-04 |
| 9 | GO:0031595: nuclear proteasome complex | 6.47E-04 |
| 10 | GO:0012507: ER to Golgi transport vesicle membrane | 7.44E-04 |
| 11 | GO:0000502: proteasome complex | 7.87E-04 |
| 12 | GO:0009514: glyoxysome | 8.45E-04 |
| 13 | GO:0016604: nuclear body | 1.06E-03 |
| 14 | GO:0048471: perinuclear region of cytoplasm | 1.28E-03 |
| 15 | GO:0005777: peroxisome | 1.57E-03 |
| 16 | GO:0005875: microtubule associated complex | 1.91E-03 |
| 17 | GO:0005741: mitochondrial outer membrane | 2.33E-03 |
| 18 | GO:0005802: trans-Golgi network | 2.39E-03 |
| 19 | GO:0005783: endoplasmic reticulum | 2.52E-03 |
| 20 | GO:0005770: late endosome | 3.25E-03 |
| 21 | GO:0005774: vacuolar membrane | 3.47E-03 |
| 22 | GO:0005886: plasma membrane | 3.76E-03 |
| 23 | GO:0005778: peroxisomal membrane | 4.46E-03 |
| 24 | GO:0005667: transcription factor complex | 5.21E-03 |
| 25 | GO:0005789: endoplasmic reticulum membrane | 5.50E-03 |
| 26 | GO:0000151: ubiquitin ligase complex | 5.79E-03 |
| 27 | GO:0000325: plant-type vacuole | 6.40E-03 |
| 28 | GO:0031201: SNARE complex | 7.69E-03 |
| 29 | GO:0005681: spliceosomal complex | 1.13E-02 |
| 30 | GO:0005829: cytosol | 1.48E-02 |
| 31 | GO:0005759: mitochondrial matrix | 1.77E-02 |
| 32 | GO:0016021: integral component of membrane | 2.16E-02 |
| 33 | GO:0009536: plastid | 2.29E-02 |
| 34 | GO:0016020: membrane | 3.20E-02 |