co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G17760

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
2	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
3	GO:0048194: Golgi vesicle budding	3.65E-06
4	GO:0042759: long-chain fatty acid biosynthetic process	8.61E-05
5	GO:0035266: meristem growth	8.61E-05
6	GO:0007292: female gamete generation	8.61E-05
7	GO:1990641: response to iron ion starvation	8.61E-05
8	GO:0000303: response to superoxide	8.61E-05
9	GO:0055046: microgametogenesis	1.63E-04
10	GO:0009727: detection of ethylene stimulus	2.04E-04
11	GO:0006101: citrate metabolic process	2.04E-04
12	GO:0019483: beta-alanine biosynthetic process	2.04E-04
13	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	2.04E-04
14	GO:0046488: phosphatidylinositol metabolic process	2.04E-04
15	GO:0042325: regulation of phosphorylation	2.04E-04
16	GO:0006212: uracil catabolic process	2.04E-04
17	GO:0019374: galactolipid metabolic process	2.04E-04
18	GO:0051788: response to misfolded protein	2.04E-04
19	GO:1900140: regulation of seedling development	3.42E-04
20	GO:0061158: 3'-UTR-mediated mRNA destabilization	3.42E-04
21	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	3.42E-04
22	GO:0060968: regulation of gene silencing	3.42E-04
23	GO:0010498: proteasomal protein catabolic process	3.42E-04
24	GO:0046686: response to cadmium ion	3.73E-04
25	GO:0009561: megagametogenesis	4.16E-04
26	GO:0006882: cellular zinc ion homeostasis	4.92E-04
27	GO:0046513: ceramide biosynthetic process	4.92E-04
28	GO:0006809: nitric oxide biosynthetic process	4.92E-04
29	GO:0009399: nitrogen fixation	4.92E-04
30	GO:0071554: cell wall organization or biogenesis	6.42E-04
31	GO:0006878: cellular copper ion homeostasis	6.55E-04
32	GO:0006542: glutamine biosynthetic process	6.55E-04
33	GO:0010150: leaf senescence	8.20E-04
34	GO:0048015: phosphatidylinositol-mediated signaling	8.29E-04
35	GO:0006097: glyoxylate cycle	8.29E-04
36	GO:0002238: response to molecule of fungal origin	1.01E-03
37	GO:0050665: hydrogen peroxide biosynthetic process	1.01E-03
38	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.01E-03
39	GO:0048827: phyllome development	1.01E-03
40	GO:0048232: male gamete generation	1.01E-03
41	GO:0043248: proteasome assembly	1.01E-03
42	GO:0006499: N-terminal protein myristoylation	1.29E-03
43	GO:0006970: response to osmotic stress	1.54E-03
44	GO:0006099: tricarboxylic acid cycle	1.54E-03
45	GO:0009690: cytokinin metabolic process	1.63E-03
46	GO:0010078: maintenance of root meristem identity	1.63E-03
47	GO:0006102: isocitrate metabolic process	1.63E-03
48	GO:0006644: phospholipid metabolic process	1.63E-03
49	GO:0009819: drought recovery	1.63E-03
50	GO:0006491: N-glycan processing	1.63E-03
51	GO:0043562: cellular response to nitrogen levels	1.86E-03
52	GO:0046777: protein autophosphorylation	2.00E-03
53	GO:0009056: catabolic process	2.10E-03
54	GO:0048829: root cap development	2.61E-03
55	GO:0010015: root morphogenesis	2.87E-03
56	GO:0052544: defense response by callose deposition in cell wall	2.87E-03
57	GO:0006096: glycolytic process	2.99E-03
58	GO:0048367: shoot system development	3.09E-03
59	GO:0010105: negative regulation of ethylene-activated signaling pathway	3.15E-03
60	GO:0000266: mitochondrial fission	3.15E-03
61	GO:0012501: programmed cell death	3.15E-03
62	GO:0048364: root development	3.17E-03
63	GO:0006807: nitrogen compound metabolic process	3.43E-03
64	GO:0010102: lateral root morphogenesis	3.43E-03
65	GO:0002237: response to molecule of bacterial origin	3.73E-03
66	GO:0009933: meristem structural organization	3.73E-03
67	GO:0090351: seedling development	4.03E-03
68	GO:2000377: regulation of reactive oxygen species metabolic process	4.65E-03
69	GO:0006487: protein N-linked glycosylation	4.65E-03
70	GO:0030433: ubiquitin-dependent ERAD pathway	5.66E-03
71	GO:0040008: regulation of growth	5.90E-03
72	GO:0001944: vasculature development	6.01E-03
73	GO:0009625: response to insect	6.01E-03
74	GO:0010227: floral organ abscission	6.01E-03
75	GO:0006012: galactose metabolic process	6.01E-03
76	GO:0009306: protein secretion	6.36E-03
77	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	6.91E-03
78	GO:0010182: sugar mediated signaling pathway	7.48E-03
79	GO:0048544: recognition of pollen	7.87E-03
80	GO:0010193: response to ozone	8.66E-03
81	GO:0010583: response to cyclopentenone	9.07E-03
82	GO:0016032: viral process	9.07E-03
83	GO:0071281: cellular response to iron ion	9.48E-03
84	GO:0006914: autophagy	9.91E-03
85	GO:0006904: vesicle docking involved in exocytosis	1.03E-02
86	GO:0051607: defense response to virus	1.08E-02
87	GO:0009723: response to ethylene	1.11E-02
88	GO:0010029: regulation of seed germination	1.17E-02
89	GO:0009816: defense response to bacterium, incompatible interaction	1.17E-02
90	GO:0042128: nitrate assimilation	1.21E-02
91	GO:0016192: vesicle-mediated transport	1.25E-02
92	GO:0010311: lateral root formation	1.40E-02
93	GO:0009407: toxin catabolic process	1.45E-02
94	GO:0006811: ion transport	1.45E-02
95	GO:0010119: regulation of stomatal movement	1.50E-02
96	GO:0009867: jasmonic acid mediated signaling pathway	1.60E-02
97	GO:0045087: innate immune response	1.60E-02
98	GO:0016042: lipid catabolic process	1.71E-02
99	GO:0009408: response to heat	1.76E-02
100	GO:0051707: response to other organism	1.92E-02
101	GO:0000209: protein polyubiquitination	1.97E-02
102	GO:0009644: response to high light intensity	2.02E-02
103	GO:0009636: response to toxic substance	2.08E-02
104	GO:0009965: leaf morphogenesis	2.08E-02
105	GO:0006855: drug transmembrane transport	2.14E-02
106	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.19E-02
107	GO:0009873: ethylene-activated signaling pathway	2.27E-02
108	GO:0006486: protein glycosylation	2.37E-02
109	GO:0006468: protein phosphorylation	2.60E-02
110	GO:0018105: peptidyl-serine phosphorylation	3.11E-02
111	GO:0006396: RNA processing	3.11E-02
112	GO:0051726: regulation of cell cycle	3.17E-02
113	GO:0051301: cell division	3.40E-02
114	GO:0009845: seed germination	3.78E-02
115	GO:0009790: embryo development	3.99E-02
116	GO:0009739: response to gibberellin	4.86E-02
117	GO:0007166: cell surface receptor signaling pathway	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0016504: peptidase activator activity	0.00E+00
2	GO:0005548: phospholipid transporter activity	0.00E+00
3	GO:0003837: beta-ureidopropionase activity	0.00E+00
4	GO:0070577: lysine-acetylated histone binding	0.00E+00
5	GO:0004012: phospholipid-translocating ATPase activity	4.23E-10
6	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	2.69E-08
7	GO:0000287: magnesium ion binding	7.46E-07
8	GO:0005524: ATP binding	4.30E-06
9	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	8.61E-05
10	GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor	8.61E-05
11	GO:0030955: potassium ion binding	8.63E-05
12	GO:0004743: pyruvate kinase activity	8.63E-05
13	GO:0050291: sphingosine N-acyltransferase activity	2.04E-04
14	GO:0003994: aconitate hydratase activity	2.04E-04
15	GO:0038199: ethylene receptor activity	2.04E-04
16	GO:0004674: protein serine/threonine kinase activity	2.95E-04
17	GO:0016805: dipeptidase activity	3.42E-04
18	GO:0051740: ethylene binding	4.92E-04
19	GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	4.92E-04
20	GO:0070628: proteasome binding	6.55E-04
21	GO:0016301: kinase activity	7.18E-04
22	GO:0005496: steroid binding	8.29E-04
23	GO:0004356: glutamate-ammonia ligase activity	8.29E-04
24	GO:0016413: O-acetyltransferase activity	8.66E-04
25	GO:0042578: phosphoric ester hydrolase activity	1.01E-03
26	GO:0036402: proteasome-activating ATPase activity	1.01E-03
27	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	1.20E-03
28	GO:0004559: alpha-mannosidase activity	1.20E-03
29	GO:0003950: NAD+ ADP-ribosyltransferase activity	1.20E-03
30	GO:0005085: guanyl-nucleotide exchange factor activity	1.41E-03
31	GO:0004620: phospholipase activity	1.41E-03
32	GO:0008235: metalloexopeptidase activity	1.41E-03
33	GO:0004525: ribonuclease III activity	1.63E-03
34	GO:0004714: transmembrane receptor protein tyrosine kinase activity	1.63E-03
35	GO:0004034: aldose 1-epimerase activity	1.63E-03
36	GO:0047617: acyl-CoA hydrolase activity	2.35E-03
37	GO:0004673: protein histidine kinase activity	2.61E-03
38	GO:0004177: aminopeptidase activity	2.87E-03
39	GO:0000155: phosphorelay sensor kinase activity	3.43E-03
40	GO:0019888: protein phosphatase regulator activity	3.43E-03
41	GO:0017025: TBP-class protein binding	4.03E-03
42	GO:0016887: ATPase activity	5.24E-03
43	GO:0003727: single-stranded RNA binding	6.36E-03
44	GO:0016853: isomerase activity	7.87E-03
45	GO:0048038: quinone binding	8.66E-03
46	GO:0030246: carbohydrate binding	9.07E-03
47	GO:0000156: phosphorelay response regulator activity	9.48E-03
48	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.21E-02
49	GO:0004683: calmodulin-dependent protein kinase activity	1.26E-02
50	GO:0015238: drug transmembrane transporter activity	1.40E-02
51	GO:0030145: manganese ion binding	1.50E-02
52	GO:0051539: 4 iron, 4 sulfur cluster binding	1.76E-02
53	GO:0004364: glutathione transferase activity	1.86E-02
54	GO:0004672: protein kinase activity	2.47E-02
55	GO:0015171: amino acid transmembrane transporter activity	2.55E-02
56	GO:0045735: nutrient reservoir activity	2.67E-02
57	GO:0016746: transferase activity, transferring acyl groups	3.11E-02
58	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3.64E-02
59	GO:0004252: serine-type endopeptidase activity	3.85E-02
60	GO:0008565: protein transporter activity	4.06E-02
61	GO:0015297: antiporter activity	4.34E-02
62	GO:0005507: copper ion binding	4.43E-02
63	GO:0008017: microtubule binding	4.64E-02
64	GO:0005516: calmodulin binding	4.67E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.63E-05
2	GO:0045252: oxoglutarate dehydrogenase complex	8.61E-05
3	GO:0005789: endoplasmic reticulum membrane	3.57E-04
4	GO:0005802: trans-Golgi network	4.95E-04
5	GO:0016021: integral component of membrane	6.03E-04
6	GO:0005776: autophagosome	6.55E-04
7	GO:0032588: trans-Golgi network membrane	1.01E-03
8	GO:0031597: cytosolic proteasome complex	1.20E-03
9	GO:0016363: nuclear matrix	1.20E-03
10	GO:0031595: nuclear proteasome complex	1.41E-03
11	GO:0008540: proteasome regulatory particle, base subcomplex	2.35E-03
12	GO:0005794: Golgi apparatus	2.41E-03
13	GO:0005768: endosome	2.93E-03
14	GO:0010008: endosome membrane	3.09E-03
15	GO:0016602: CCAAT-binding factor complex	3.43E-03
16	GO:0005829: cytosol	4.19E-03
17	GO:0005839: proteasome core complex	5.32E-03
18	GO:0031410: cytoplasmic vesicle	5.66E-03
19	GO:0005783: endoplasmic reticulum	7.24E-03
20	GO:0005770: late endosome	7.48E-03
21	GO:0031902: late endosome membrane	1.81E-02
22	GO:0000139: Golgi membrane	2.23E-02
23	GO:0005774: vacuolar membrane	2.24E-02
24	GO:0000502: proteasome complex	2.37E-02
25	GO:0009524: phragmoplast	3.71E-02