co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G16850

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0033494: ferulate metabolic process	0.00E+00
2	GO:0007638: mechanosensory behavior	0.00E+00
3	GO:0090393: sepal giant cell development	0.00E+00
4	GO:0060416: response to growth hormone	0.00E+00
5	GO:0015976: carbon utilization	3.07E-07
6	GO:0071555: cell wall organization	1.65E-06
7	GO:0010411: xyloglucan metabolic process	2.78E-06
8	GO:0042546: cell wall biogenesis	1.41E-05
9	GO:0010037: response to carbon dioxide	4.76E-05
10	GO:0006749: glutathione metabolic process	4.76E-05
11	GO:2000122: negative regulation of stomatal complex development	4.76E-05
12	GO:0042335: cuticle development	2.07E-04
13	GO:0007155: cell adhesion	2.52E-04
14	GO:0071370: cellular response to gibberellin stimulus	2.65E-04
15	GO:0006723: cuticle hydrocarbon biosynthetic process	2.65E-04
16	GO:0046520: sphingoid biosynthetic process	2.65E-04
17	GO:0071554: cell wall organization or biogenesis	3.07E-04
18	GO:0010583: response to cyclopentenone	3.35E-04
19	GO:0007267: cell-cell signaling	4.29E-04
20	GO:0042545: cell wall modification	4.62E-04
21	GO:0080148: negative regulation of response to water deprivation	5.83E-04
22	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	5.83E-04
23	GO:0030388: fructose 1,6-bisphosphate metabolic process	5.83E-04
24	GO:2000123: positive regulation of stomatal complex development	5.83E-04
25	GO:0006695: cholesterol biosynthetic process	5.83E-04
26	GO:0060919: auxin influx	5.83E-04
27	GO:0015786: UDP-glucose transport	5.83E-04
28	GO:0000038: very long-chain fatty acid metabolic process	5.99E-04
29	GO:0080167: response to karrikin	6.39E-04
30	GO:0015783: GDP-fucose transport	9.47E-04
31	GO:0033591: response to L-ascorbic acid	9.47E-04
32	GO:0006000: fructose metabolic process	9.47E-04
33	GO:0043447: alkane biosynthetic process	9.47E-04
34	GO:0015840: urea transport	9.47E-04
35	GO:0006633: fatty acid biosynthetic process	9.61E-04
36	GO:0006833: water transport	1.08E-03
37	GO:0010025: wax biosynthetic process	1.08E-03
38	GO:0045490: pectin catabolic process	1.11E-03
39	GO:0006168: adenine salvage	1.35E-03
40	GO:0032877: positive regulation of DNA endoreduplication	1.35E-03
41	GO:0006166: purine ribonucleoside salvage	1.35E-03
42	GO:0007231: osmosensory signaling pathway	1.35E-03
43	GO:0006241: CTP biosynthetic process	1.35E-03
44	GO:0072334: UDP-galactose transmembrane transport	1.35E-03
45	GO:0080170: hydrogen peroxide transmembrane transport	1.35E-03
46	GO:0051016: barbed-end actin filament capping	1.35E-03
47	GO:0006165: nucleoside diphosphate phosphorylation	1.35E-03
48	GO:0006228: UTP biosynthetic process	1.35E-03
49	GO:0019464: glycine decarboxylation via glycine cleavage system	1.81E-03
50	GO:0006183: GTP biosynthetic process	1.81E-03
51	GO:0033500: carbohydrate homeostasis	1.81E-03
52	GO:0031122: cytoplasmic microtubule organization	1.81E-03
53	GO:2000038: regulation of stomatal complex development	1.81E-03
54	GO:0006546: glycine catabolic process	1.81E-03
55	GO:0019722: calcium-mediated signaling	1.87E-03
56	GO:0034220: ion transmembrane transport	2.19E-03
57	GO:0044209: AMP salvage	2.31E-03
58	GO:0032876: negative regulation of DNA endoreduplication	2.31E-03
59	GO:0010375: stomatal complex patterning	2.31E-03
60	GO:0006656: phosphatidylcholine biosynthetic process	2.31E-03
61	GO:0046785: microtubule polymerization	2.31E-03
62	GO:0000741: karyogamy	2.85E-03
63	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	3.43E-03
64	GO:0042372: phylloquinone biosynthetic process	3.43E-03
65	GO:0045926: negative regulation of growth	3.43E-03
66	GO:0009612: response to mechanical stimulus	3.43E-03
67	GO:0009645: response to low light intensity stimulus	4.04E-03
68	GO:0030497: fatty acid elongation	4.04E-03
69	GO:0016126: sterol biosynthetic process	4.19E-03
70	GO:0009850: auxin metabolic process	4.69E-03
71	GO:0009704: de-etiolation	4.69E-03
72	GO:0045010: actin nucleation	4.69E-03
73	GO:0008610: lipid biosynthetic process	4.69E-03
74	GO:0006402: mRNA catabolic process	4.69E-03
75	GO:0007389: pattern specification process	5.37E-03
76	GO:0009932: cell tip growth	5.37E-03
77	GO:0006002: fructose 6-phosphate metabolic process	5.37E-03
78	GO:0009407: toxin catabolic process	6.03E-03
79	GO:0033384: geranyl diphosphate biosynthetic process	6.09E-03
80	GO:0006754: ATP biosynthetic process	6.09E-03
81	GO:0045337: farnesyl diphosphate biosynthetic process	6.09E-03
82	GO:0010119: regulation of stomatal movement	6.32E-03
83	GO:0016051: carbohydrate biosynthetic process	6.93E-03
84	GO:0009870: defense response signaling pathway, resistance gene-dependent	7.61E-03
85	GO:0043069: negative regulation of programmed cell death	7.61E-03
86	GO:0048829: root cap development	7.61E-03
87	GO:0019538: protein metabolic process	7.61E-03
88	GO:1903507: negative regulation of nucleic acid-templated transcription	8.42E-03
89	GO:0006816: calcium ion transport	8.42E-03
90	GO:0009773: photosynthetic electron transport in photosystem I	8.42E-03
91	GO:0019684: photosynthesis, light reaction	8.42E-03
92	GO:0009089: lysine biosynthetic process via diaminopimelate	8.42E-03
93	GO:0006790: sulfur compound metabolic process	9.26E-03
94	GO:2000028: regulation of photoperiodism, flowering	1.01E-02
95	GO:0030036: actin cytoskeleton organization	1.01E-02
96	GO:0050826: response to freezing	1.01E-02
97	GO:0009725: response to hormone	1.01E-02
98	GO:0006094: gluconeogenesis	1.01E-02
99	GO:0005986: sucrose biosynthetic process	1.01E-02
100	GO:0009636: response to toxic substance	1.01E-02
101	GO:0048768: root hair cell tip growth	1.10E-02
102	GO:0010143: cutin biosynthetic process	1.10E-02
103	GO:0019253: reductive pentose-phosphate cycle	1.10E-02
104	GO:0070588: calcium ion transmembrane transport	1.20E-02
105	GO:0046854: phosphatidylinositol phosphorylation	1.20E-02
106	GO:0009825: multidimensional cell growth	1.20E-02
107	GO:0005985: sucrose metabolic process	1.20E-02
108	GO:0006508: proteolysis	1.22E-02
109	GO:0051603: proteolysis involved in cellular protein catabolic process	1.25E-02
110	GO:0006857: oligopeptide transport	1.29E-02
111	GO:0006636: unsaturated fatty acid biosynthetic process	1.29E-02
112	GO:0009833: plant-type primary cell wall biogenesis	1.29E-02
113	GO:0009416: response to light stimulus	1.29E-02
114	GO:0005992: trehalose biosynthetic process	1.39E-02
115	GO:0006487: protein N-linked glycosylation	1.39E-02
116	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.41E-02
117	GO:0007017: microtubule-based process	1.49E-02
118	GO:0003333: amino acid transmembrane transport	1.59E-02
119	GO:0019748: secondary metabolic process	1.70E-02
120	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.70E-02
121	GO:0009294: DNA mediated transformation	1.81E-02
122	GO:0009742: brassinosteroid mediated signaling pathway	1.83E-02
123	GO:0055085: transmembrane transport	1.84E-02
124	GO:0006284: base-excision repair	1.92E-02
125	GO:0032259: methylation	2.09E-02
126	GO:0000271: polysaccharide biosynthetic process	2.15E-02
127	GO:0080022: primary root development	2.15E-02
128	GO:0010051: xylem and phloem pattern formation	2.15E-02
129	GO:0010197: polar nucleus fusion	2.26E-02
130	GO:0009741: response to brassinosteroid	2.26E-02
131	GO:0045489: pectin biosynthetic process	2.26E-02
132	GO:0006810: transport	2.28E-02
133	GO:0005975: carbohydrate metabolic process	2.41E-02
134	GO:0019252: starch biosynthetic process	2.51E-02
135	GO:0048235: pollen sperm cell differentiation	2.76E-02
136	GO:0040008: regulation of growth	2.85E-02
137	GO:1901657: glycosyl compound metabolic process	2.88E-02
138	GO:0010090: trichome morphogenesis	2.88E-02
139	GO:0007623: circadian rhythm	2.98E-02
140	GO:0007166: cell surface receptor signaling pathway	3.41E-02
141	GO:0009617: response to bacterium	3.56E-02
142	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.56E-02
143	GO:0042742: defense response to bacterium	3.66E-02
144	GO:0042128: nitrate assimilation	3.70E-02
145	GO:0009817: defense response to fungus, incompatible interaction	4.13E-02
146	GO:0000160: phosphorelay signal transduction system	4.28E-02
147	GO:0010311: lateral root formation	4.28E-02
148	GO:0007568: aging	4.58E-02
149	GO:0048527: lateral root development	4.58E-02
150	GO:0006865: amino acid transport	4.73E-02
151	GO:0009867: jasmonic acid mediated signaling pathway	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
2	GO:0052667: phosphomethylethanolamine N-methyltransferase activity	0.00E+00
3	GO:0050278: sedoheptulose-bisphosphatase activity	0.00E+00
4	GO:0016762: xyloglucan:xyloglucosyl transferase activity	6.53E-07
5	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.78E-06
6	GO:0004089: carbonate dehydratase activity	4.13E-05
7	GO:0030599: pectinesterase activity	5.19E-05
8	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	9.04E-05
9	GO:0004328: formamidase activity	2.65E-04
10	GO:0000170: sphingosine hydroxylase activity	2.65E-04
11	GO:0030797: 24-methylenesterol C-methyltransferase activity	2.65E-04
12	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	2.65E-04
13	GO:0008252: nucleotidase activity	2.65E-04
14	GO:0080132: fatty acid alpha-hydroxylase activity	2.65E-04
15	GO:0052638: indole-3-butyrate beta-glucosyltransferase activity	2.65E-04
16	GO:0008568: microtubule-severing ATPase activity	2.65E-04
17	GO:0003838: sterol 24-C-methyltransferase activity	2.65E-04
18	GO:0045330: aspartyl esterase activity	3.25E-04
19	GO:0016722: oxidoreductase activity, oxidizing metal ions	4.29E-04
20	GO:0016413: O-acetyltransferase activity	4.63E-04
21	GO:0000234: phosphoethanolamine N-methyltransferase activity	5.83E-04
22	GO:0042389: omega-3 fatty acid desaturase activity	5.83E-04
23	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	5.83E-04
24	GO:0042284: sphingolipid delta-4 desaturase activity	5.83E-04
25	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	5.83E-04
26	GO:0005457: GDP-fucose transmembrane transporter activity	9.47E-04
27	GO:0050734: hydroxycinnamoyltransferase activity	9.47E-04
28	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.08E-03
29	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.08E-03
30	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.08E-03
31	GO:0004185: serine-type carboxypeptidase activity	1.28E-03
32	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	1.35E-03
33	GO:0005460: UDP-glucose transmembrane transporter activity	1.35E-03
34	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	1.35E-03
35	GO:0004550: nucleoside diphosphate kinase activity	1.35E-03
36	GO:0004375: glycine dehydrogenase (decarboxylating) activity	1.35E-03
37	GO:0003999: adenine phosphoribosyltransferase activity	1.35E-03
38	GO:0015204: urea transmembrane transporter activity	1.81E-03
39	GO:0010328: auxin influx transmembrane transporter activity	1.81E-03
40	GO:0008725: DNA-3-methyladenine glycosylase activity	2.31E-03
41	GO:0009922: fatty acid elongase activity	2.31E-03
42	GO:0005459: UDP-galactose transmembrane transporter activity	2.31E-03
43	GO:0019901: protein kinase binding	2.71E-03
44	GO:0042578: phosphoric ester hydrolase activity	2.85E-03
45	GO:0016208: AMP binding	2.85E-03
46	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	3.43E-03
47	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	3.43E-03
48	GO:0051753: mannan synthase activity	3.43E-03
49	GO:0016759: cellulose synthase activity	3.51E-03
50	GO:0015250: water channel activity	4.19E-03
51	GO:0004871: signal transducer activity	4.21E-03
52	GO:0004564: beta-fructofuranosidase activity	4.69E-03
53	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	5.37E-03
54	GO:0016757: transferase activity, transferring glycosyl groups	5.74E-03
55	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	6.09E-03
56	GO:0004337: geranyltranstransferase activity	6.09E-03
57	GO:0004575: sucrose alpha-glucosidase activity	6.83E-03
58	GO:0004805: trehalose-phosphatase activity	7.61E-03
59	GO:0004161: dimethylallyltranstransferase activity	8.42E-03
60	GO:0004860: protein kinase inhibitor activity	8.42E-03
61	GO:0004364: glutathione transferase activity	8.58E-03
62	GO:0015293: symporter activity	1.01E-02
63	GO:0005262: calcium channel activity	1.01E-02
64	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.10E-02
65	GO:0004857: enzyme inhibitor activity	1.39E-02
66	GO:0003714: transcription corepressor activity	1.39E-02
67	GO:0004650: polygalacturonase activity	1.57E-02
68	GO:0022857: transmembrane transporter activity	1.62E-02
69	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.70E-02
70	GO:0008514: organic anion transmembrane transporter activity	1.92E-02
71	GO:0016758: transferase activity, transferring hexosyl groups	2.10E-02
72	GO:0004872: receptor activity	2.51E-02
73	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.78E-02
74	GO:0000156: phosphorelay response regulator activity	2.88E-02
75	GO:0051015: actin filament binding	2.88E-02
76	GO:0005200: structural constituent of cytoskeleton	3.15E-02
77	GO:0008375: acetylglucosaminyltransferase activity	3.70E-02
78	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.70E-02
79	GO:0042802: identical protein binding	3.78E-02
80	GO:0004683: calmodulin-dependent protein kinase activity	3.84E-02
81	GO:0102483: scopolin beta-glucosidase activity	3.84E-02
82	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.98E-02
83	GO:0003824: catalytic activity	4.19E-02
84	GO:0005215: transporter activity	4.23E-02
85	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	4.43E-02

Rank	GO Term	Adjusted P value
1	GO:0009505: plant-type cell wall	7.07E-12
2	GO:0005576: extracellular region	9.28E-11
3	GO:0005618: cell wall	5.33E-09
4	GO:0048046: apoplast	2.00E-08
5	GO:0031225: anchored component of membrane	4.82E-08
6	GO:0046658: anchored component of plasma membrane	2.99E-07
7	GO:0005794: Golgi apparatus	1.19E-04
8	GO:0005886: plasma membrane	5.14E-04
9	GO:0042170: plastid membrane	5.83E-04
10	GO:0009506: plasmodesma	1.24E-03
11	GO:0005775: vacuolar lumen	1.35E-03
12	GO:0005960: glycine cleavage complex	1.35E-03
13	GO:0000139: Golgi membrane	2.08E-03
14	GO:0016021: integral component of membrane	2.69E-03
15	GO:0042807: central vacuole	4.04E-03
16	GO:0000326: protein storage vacuole	5.37E-03
17	GO:0045298: tubulin complex	6.09E-03
18	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	6.09E-03
19	GO:0005773: vacuole	6.55E-03
20	GO:0055028: cortical microtubule	7.61E-03
21	GO:0005789: endoplasmic reticulum membrane	8.30E-03
22	GO:0048471: perinuclear region of cytoplasm	8.42E-03
23	GO:0030095: chloroplast photosystem II	1.10E-02
24	GO:0005758: mitochondrial intermembrane space	1.39E-02
25	GO:0009654: photosystem II oxygen evolving complex	1.49E-02
26	GO:0016020: membrane	1.98E-02
27	GO:0009543: chloroplast thylakoid lumen	2.16E-02
28	GO:0019898: extrinsic component of membrane	2.51E-02
29	GO:0005778: peroxisomal membrane	3.15E-02
30	GO:0010319: stromule	3.15E-02
31	GO:0005887: integral component of plasma membrane	3.23E-02
32	GO:0030529: intracellular ribonucleoprotein complex	3.42E-02
33	GO:0000325: plant-type vacuole	4.58E-02