co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G14890

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042493: response to drug	0.00E+00
2	GO:1905499: trichome papilla formation	0.00E+00
3	GO:0015739: sialic acid transport	0.00E+00
4	GO:0033494: ferulate metabolic process	0.00E+00
5	GO:0007638: mechanosensory behavior	0.00E+00
6	GO:0071555: cell wall organization	1.48E-08
7	GO:0042335: cuticle development	1.98E-05
8	GO:0042254: ribosome biogenesis	1.99E-05
9	GO:0042546: cell wall biogenesis	2.94E-05
10	GO:0009956: radial pattern formation	6.79E-05
11	GO:0010411: xyloglucan metabolic process	9.89E-05
12	GO:0010067: procambium histogenesis	2.10E-04
13	GO:0006633: fatty acid biosynthetic process	2.86E-04
14	GO:0042371: vitamin K biosynthetic process	3.27E-04
15	GO:0071588: hydrogen peroxide mediated signaling pathway	3.27E-04
16	GO:0010729: positive regulation of hydrogen peroxide biosynthetic process	3.27E-04
17	GO:0060627: regulation of vesicle-mediated transport	3.27E-04
18	GO:0046520: sphingoid biosynthetic process	3.27E-04
19	GO:0010442: guard cell morphogenesis	3.27E-04
20	GO:0071277: cellular response to calcium ion	3.27E-04
21	GO:1901599: (-)-pinoresinol biosynthetic process	3.27E-04
22	GO:0045490: pectin catabolic process	3.42E-04
23	GO:0006869: lipid transport	4.17E-04
24	GO:0010583: response to cyclopentenone	4.99E-04
25	GO:0015780: nucleotide-sugar transport	5.07E-04
26	GO:0052541: plant-type cell wall cellulose metabolic process	7.13E-04
27	GO:0009725: response to hormone	1.04E-03
28	GO:0006065: UDP-glucuronate biosynthetic process	1.16E-03
29	GO:0090506: axillary shoot meristem initiation	1.16E-03
30	GO:0015714: phosphoenolpyruvate transport	1.16E-03
31	GO:0010223: secondary shoot formation	1.17E-03
32	GO:0010143: cutin biosynthetic process	1.17E-03
33	GO:0009933: meristem structural organization	1.17E-03
34	GO:0009735: response to cytokinin	1.38E-03
35	GO:0010025: wax biosynthetic process	1.45E-03
36	GO:0043572: plastid fission	1.66E-03
37	GO:0006166: purine ribonucleoside salvage	1.66E-03
38	GO:0007231: osmosensory signaling pathway	1.66E-03
39	GO:0009650: UV protection	1.66E-03
40	GO:0006168: adenine salvage	1.66E-03
41	GO:0006631: fatty acid metabolic process	1.71E-03
42	GO:0016042: lipid catabolic process	2.06E-03
43	GO:0008643: carbohydrate transport	2.09E-03
44	GO:0030245: cellulose catabolic process	2.14E-03
45	GO:0010037: response to carbon dioxide	2.23E-03
46	GO:0015976: carbon utilization	2.23E-03
47	GO:0009765: photosynthesis, light harvesting	2.23E-03
48	GO:0006085: acetyl-CoA biosynthetic process	2.23E-03
49	GO:0006183: GTP biosynthetic process	2.23E-03
50	GO:2000122: negative regulation of stomatal complex development	2.23E-03
51	GO:0033500: carbohydrate homeostasis	2.23E-03
52	GO:0000919: cell plate assembly	2.23E-03
53	GO:0042991: transcription factor import into nucleus	2.23E-03
54	GO:0015713: phosphoglycerate transport	2.23E-03
55	GO:0001944: vasculature development	2.33E-03
56	GO:0010089: xylem development	2.53E-03
57	GO:0019722: calcium-mediated signaling	2.53E-03
58	GO:0007094: mitotic spindle assembly checkpoint	2.84E-03
59	GO:0016123: xanthophyll biosynthetic process	2.84E-03
60	GO:0044209: AMP salvage	2.84E-03
61	GO:0006665: sphingolipid metabolic process	2.84E-03
62	GO:0048359: mucilage metabolic process involved in seed coat development	2.84E-03
63	GO:0016120: carotene biosynthetic process	2.84E-03
64	GO:0006656: phosphatidylcholine biosynthetic process	2.84E-03
65	GO:0000413: protein peptidyl-prolyl isomerization	2.96E-03
66	GO:0000271: polysaccharide biosynthetic process	2.96E-03
67	GO:0010305: leaf vascular tissue pattern formation	3.19E-03
68	GO:0010405: arabinogalactan protein metabolic process	3.51E-03
69	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	3.51E-03
70	GO:0009913: epidermal cell differentiation	3.51E-03
71	GO:0018258: protein O-linked glycosylation via hydroxyproline	3.51E-03
72	GO:0035435: phosphate ion transmembrane transport	3.51E-03
73	GO:0010019: chloroplast-nucleus signaling pathway	4.23E-03
74	GO:0048444: floral organ morphogenesis	4.23E-03
75	GO:0010555: response to mannitol	4.23E-03
76	GO:0009955: adaxial/abaxial pattern specification	4.23E-03
77	GO:0042372: phylloquinone biosynthetic process	4.23E-03
78	GO:0006694: steroid biosynthetic process	4.23E-03
79	GO:1901259: chloroplast rRNA processing	4.23E-03
80	GO:0055114: oxidation-reduction process	4.46E-03
81	GO:0050790: regulation of catalytic activity	4.99E-03
82	GO:0009395: phospholipid catabolic process	4.99E-03
83	GO:0071669: plant-type cell wall organization or biogenesis	4.99E-03
84	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	5.02E-03
85	GO:0007267: cell-cell signaling	5.07E-03
86	GO:0006412: translation	5.78E-03
87	GO:0007155: cell adhesion	5.80E-03
88	GO:0008610: lipid biosynthetic process	5.80E-03
89	GO:0030091: protein repair	5.80E-03
90	GO:0009642: response to light intensity	5.80E-03
91	GO:0009704: de-etiolation	5.80E-03
92	GO:0045454: cell redox homeostasis	6.27E-03
93	GO:0009808: lignin metabolic process	6.65E-03
94	GO:0006526: arginine biosynthetic process	6.65E-03
95	GO:0032544: plastid translation	6.65E-03
96	GO:0042742: defense response to bacterium	6.66E-03
97	GO:0030244: cellulose biosynthetic process	7.44E-03
98	GO:0010206: photosystem II repair	7.54E-03
99	GO:0090333: regulation of stomatal closure	7.54E-03
100	GO:0009832: plant-type cell wall biogenesis	7.82E-03
101	GO:0009834: plant-type secondary cell wall biogenesis	8.21E-03
102	GO:0042761: very long-chain fatty acid biosynthetic process	8.48E-03
103	GO:0007346: regulation of mitotic cell cycle	8.48E-03
104	GO:0007568: aging	8.61E-03
105	GO:0043069: negative regulation of programmed cell death	9.45E-03
106	GO:0006949: syncytium formation	9.45E-03
107	GO:0018119: peptidyl-cysteine S-nitrosylation	1.05E-02
108	GO:0010015: root morphogenesis	1.05E-02
109	GO:0000038: very long-chain fatty acid metabolic process	1.05E-02
110	GO:0006816: calcium ion transport	1.05E-02
111	GO:0009773: photosynthetic electron transport in photosystem I	1.05E-02
112	GO:0009807: lignan biosynthetic process	1.05E-02
113	GO:0006820: anion transport	1.15E-02
114	GO:0009409: response to cold	1.20E-02
115	GO:0009744: response to sucrose	1.22E-02
116	GO:0050826: response to freezing	1.26E-02
117	GO:0006006: glucose metabolic process	1.26E-02
118	GO:0010540: basipetal auxin transport	1.37E-02
119	GO:0009934: regulation of meristem structural organization	1.37E-02
120	GO:0010207: photosystem II assembly	1.37E-02
121	GO:0010020: chloroplast fission	1.37E-02
122	GO:0019253: reductive pentose-phosphate cycle	1.37E-02
123	GO:0006810: transport	1.40E-02
124	GO:0070588: calcium ion transmembrane transport	1.49E-02
125	GO:0009825: multidimensional cell growth	1.49E-02
126	GO:0005975: carbohydrate metabolic process	1.50E-02
127	GO:0009833: plant-type primary cell wall biogenesis	1.61E-02
128	GO:0006071: glycerol metabolic process	1.61E-02
129	GO:0006833: water transport	1.61E-02
130	GO:0019762: glucosinolate catabolic process	1.61E-02
131	GO:0006636: unsaturated fatty acid biosynthetic process	1.61E-02
132	GO:0009736: cytokinin-activated signaling pathway	1.65E-02
133	GO:0019344: cysteine biosynthetic process	1.73E-02
134	GO:0000027: ribosomal large subunit assembly	1.73E-02
135	GO:0051302: regulation of cell division	1.86E-02
136	GO:0010026: trichome differentiation	1.86E-02
137	GO:0043622: cortical microtubule organization	1.86E-02
138	GO:0007017: microtubule-based process	1.86E-02
139	GO:0009768: photosynthesis, light harvesting in photosystem I	1.86E-02
140	GO:0016998: cell wall macromolecule catabolic process	1.99E-02
141	GO:0061077: chaperone-mediated protein folding	1.99E-02
142	GO:0048367: shoot system development	2.02E-02
143	GO:0080092: regulation of pollen tube growth	2.12E-02
144	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	2.25E-02
145	GO:0009294: DNA mediated transformation	2.25E-02
146	GO:0009411: response to UV	2.25E-02
147	GO:0042545: cell wall modification	2.28E-02
148	GO:0015979: photosynthesis	2.36E-02
149	GO:0010091: trichome branching	2.39E-02
150	GO:0016117: carotenoid biosynthetic process	2.53E-02
151	GO:0034220: ion transmembrane transport	2.68E-02
152	GO:0010087: phloem or xylem histogenesis	2.68E-02
153	GO:0045489: pectin biosynthetic process	2.82E-02
154	GO:0006520: cellular amino acid metabolic process	2.82E-02
155	GO:0048825: cotyledon development	3.12E-02
156	GO:0016132: brassinosteroid biosynthetic process	3.28E-02
157	GO:0071554: cell wall organization or biogenesis	3.28E-02
158	GO:0000302: response to reactive oxygen species	3.28E-02
159	GO:0002229: defense response to oomycetes	3.28E-02
160	GO:0007264: small GTPase mediated signal transduction	3.44E-02
161	GO:1901657: glycosyl compound metabolic process	3.60E-02
162	GO:0009828: plant-type cell wall loosening	3.76E-02
163	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	4.43E-02
164	GO:0009627: systemic acquired resistance	4.61E-02
165	GO:0042128: nitrate assimilation	4.61E-02
166	GO:0015995: chlorophyll biosynthetic process	4.78E-02
167	GO:0016049: cell growth	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
2	GO:0019146: arabinose-5-phosphate isomerase activity	0.00E+00
3	GO:0050614: delta24-sterol reductase activity	0.00E+00
4	GO:0005456: CMP-N-acetylneuraminate transmembrane transporter activity	0.00E+00
5	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
6	GO:0052667: phosphomethylethanolamine N-methyltransferase activity	0.00E+00
7	GO:0015136: sialic acid transmembrane transporter activity	0.00E+00
8	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
9	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
10	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
11	GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity	0.00E+00
12	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
13	GO:0051920: peroxiredoxin activity	3.15E-08
14	GO:0019843: rRNA binding	9.10E-08
15	GO:0016209: antioxidant activity	1.12E-07
16	GO:0051753: mannan synthase activity	4.04E-06
17	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	7.29E-06
18	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	1.71E-05
19	GO:0016788: hydrolase activity, acting on ester bonds	1.99E-05
20	GO:0016762: xyloglucan:xyloglucosyl transferase activity	3.56E-05
21	GO:0052689: carboxylic ester hydrolase activity	4.82E-05
22	GO:0016798: hydrolase activity, acting on glycosyl bonds	9.89E-05
23	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	2.10E-04
24	GO:0030570: pectate lyase activity	2.25E-04
25	GO:0042349: guiding stereospecific synthesis activity	3.27E-04
26	GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity	3.27E-04
27	GO:0000170: sphingosine hydroxylase activity	3.27E-04
28	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	3.27E-04
29	GO:0004560: alpha-L-fucosidase activity	3.27E-04
30	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	3.27E-04
31	GO:0080132: fatty acid alpha-hydroxylase activity	3.27E-04
32	GO:0015121: phosphoenolpyruvate:phosphate antiporter activity	3.27E-04
33	GO:0009374: biotin binding	3.27E-04
34	GO:0031957: very long-chain fatty acid-CoA ligase activity	3.27E-04
35	GO:0042389: omega-3 fatty acid desaturase activity	7.13E-04
36	GO:0003938: IMP dehydrogenase activity	7.13E-04
37	GO:0042284: sphingolipid delta-4 desaturase activity	7.13E-04
38	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	7.13E-04
39	GO:0000234: phosphoethanolamine N-methyltransferase activity	7.13E-04
40	GO:0008289: lipid binding	1.02E-03
41	GO:0030267: glyoxylate reductase (NADP) activity	1.16E-03
42	GO:0003979: UDP-glucose 6-dehydrogenase activity	1.16E-03
43	GO:0050734: hydroxycinnamoyltransferase activity	1.16E-03
44	GO:0005504: fatty acid binding	1.16E-03
45	GO:0003735: structural constituent of ribosome	1.18E-03
46	GO:0004857: enzyme inhibitor activity	1.61E-03
47	GO:0001872: (1->3)-beta-D-glucan binding	1.66E-03
48	GO:0003878: ATP citrate synthase activity	1.66E-03
49	GO:0003999: adenine phosphoribosyltransferase activity	1.66E-03
50	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	1.66E-03
51	GO:0015120: phosphoglycerate transmembrane transporter activity	2.23E-03
52	GO:0004659: prenyltransferase activity	2.23E-03
53	GO:0045430: chalcone isomerase activity	2.23E-03
54	GO:0052793: pectin acetylesterase activity	2.23E-03
55	GO:0046527: glucosyltransferase activity	2.23E-03
56	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.30E-03
57	GO:0016760: cellulose synthase (UDP-forming) activity	2.33E-03
58	GO:0008810: cellulase activity	2.33E-03
59	GO:0051287: NAD binding	2.41E-03
60	GO:0008514: organic anion transmembrane transporter activity	2.53E-03
61	GO:0003989: acetyl-CoA carboxylase activity	2.84E-03
62	GO:0008381: mechanically-gated ion channel activity	2.84E-03
63	GO:0009922: fatty acid elongase activity	2.84E-03
64	GO:0004040: amidase activity	2.84E-03
65	GO:0004601: peroxidase activity	3.44E-03
66	GO:1990714: hydroxyproline O-galactosyltransferase activity	3.51E-03
67	GO:0004130: cytochrome-c peroxidase activity	3.51E-03
68	GO:0016208: AMP binding	3.51E-03
69	GO:0016688: L-ascorbate peroxidase activity	3.51E-03
70	GO:0004872: receptor activity	3.68E-03
71	GO:0030599: pectinesterase activity	4.02E-03
72	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	4.23E-03
73	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	4.23E-03
74	GO:0102391: decanoate--CoA ligase activity	4.23E-03
75	GO:0016759: cellulose synthase activity	4.77E-03
76	GO:0004467: long-chain fatty acid-CoA ligase activity	4.99E-03
77	GO:0005338: nucleotide-sugar transmembrane transporter activity	4.99E-03
78	GO:0052747: sinapyl alcohol dehydrogenase activity	5.80E-03
79	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	6.65E-03
80	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	7.54E-03
81	GO:0008889: glycerophosphodiester phosphodiesterase activity	7.54E-03
82	GO:0030234: enzyme regulator activity	9.45E-03
83	GO:0009055: electron carrier activity	9.60E-03
84	GO:0005089: Rho guanyl-nucleotide exchange factor activity	1.05E-02
85	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.15E-02
86	GO:0005516: calmodulin binding	1.21E-02
87	GO:0004089: carbonate dehydratase activity	1.26E-02
88	GO:0005262: calcium channel activity	1.26E-02
89	GO:0015114: phosphate ion transmembrane transporter activity	1.26E-02
90	GO:0004565: beta-galactosidase activity	1.26E-02
91	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.61E-02
92	GO:0031409: pigment binding	1.61E-02
93	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.61E-02
94	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.61E-02
95	GO:0005528: FK506 binding	1.73E-02
96	GO:0045330: aspartyl esterase activity	1.83E-02
97	GO:0008324: cation transmembrane transporter activity	1.86E-02
98	GO:0004176: ATP-dependent peptidase activity	1.99E-02
99	GO:0033612: receptor serine/threonine kinase binding	1.99E-02
100	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	2.12E-02
101	GO:0004650: polygalacturonase activity	2.15E-02
102	GO:0005102: receptor binding	2.53E-02
103	GO:0016758: transferase activity, transferring hexosyl groups	2.87E-02
104	GO:0016829: lyase activity	3.18E-02
105	GO:0003924: GTPase activity	3.25E-02
106	GO:0005507: copper ion binding	3.44E-02
107	GO:0000156: phosphorelay response regulator activity	3.60E-02
108	GO:0004672: protein kinase activity	3.83E-02
109	GO:0016722: oxidoreductase activity, oxidizing metal ions	3.92E-02
110	GO:0008237: metallopeptidase activity	3.92E-02
111	GO:0005200: structural constituent of cytoskeleton	3.92E-02
112	GO:0016413: O-acetyltransferase activity	4.09E-02
113	GO:0005525: GTP binding	4.24E-02
114	GO:0015250: water channel activity	4.26E-02
115	GO:0016168: chlorophyll binding	4.43E-02
116	GO:0009931: calcium-dependent protein serine/threonine kinase activity	4.61E-02
117	GO:0004683: calmodulin-dependent protein kinase activity	4.78E-02
118	GO:0102483: scopolin beta-glucosidase activity	4.78E-02
119	GO:0030247: polysaccharide binding	4.78E-02
120	GO:0008236: serine-type peptidase activity	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0048046: apoplast	1.89E-17
2	GO:0046658: anchored component of plasma membrane	1.06E-11
3	GO:0009941: chloroplast envelope	1.76E-11
4	GO:0031225: anchored component of membrane	2.67E-10
5	GO:0009570: chloroplast stroma	2.57E-09
6	GO:0009507: chloroplast	1.85E-08
7	GO:0009505: plant-type cell wall	5.98E-08
8	GO:0009535: chloroplast thylakoid membrane	2.98E-07
9	GO:0005886: plasma membrane	3.35E-07
10	GO:0005576: extracellular region	4.74E-07
11	GO:0009579: thylakoid	5.84E-07
12	GO:0005618: cell wall	1.82E-06
13	GO:0009543: chloroplast thylakoid lumen	2.06E-05
14	GO:0031977: thylakoid lumen	2.20E-05
15	GO:0009534: chloroplast thylakoid	3.34E-05
16	GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex	3.27E-04
17	GO:0009923: fatty acid elongase complex	3.27E-04
18	GO:0010319: stromule	6.32E-04
19	GO:0042170: plastid membrane	7.13E-04
20	GO:0005840: ribosome	7.34E-04
21	GO:0000311: plastid large ribosomal subunit	9.18E-04
22	GO:0010330: cellulose synthase complex	1.16E-03
23	GO:0009317: acetyl-CoA carboxylase complex	1.16E-03
24	GO:0000139: Golgi membrane	1.35E-03
25	GO:0009346: citrate lyase complex	1.66E-03
26	GO:0009506: plasmodesma	1.68E-03
27	GO:0016020: membrane	1.89E-03
28	GO:0005828: kinetochore microtubule	2.23E-03
29	GO:0000776: kinetochore	2.84E-03
30	GO:0010369: chromocenter	4.23E-03
31	GO:0010005: cortical microtubule, transverse to long axis	4.23E-03
32	GO:0000777: condensed chromosome kinetochore	4.23E-03
33	GO:0016021: integral component of membrane	4.51E-03
34	GO:0031969: chloroplast membrane	4.77E-03
35	GO:0009533: chloroplast stromal thylakoid	4.99E-03
36	GO:0005763: mitochondrial small ribosomal subunit	7.54E-03
37	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	7.54E-03
38	GO:0045298: tubulin complex	7.54E-03
39	GO:0005876: spindle microtubule	8.48E-03
40	GO:0016324: apical plasma membrane	9.45E-03
41	GO:0005794: Golgi apparatus	9.97E-03
42	GO:0030095: chloroplast photosystem II	1.37E-02
43	GO:0030076: light-harvesting complex	1.49E-02
44	GO:0005875: microtubule associated complex	1.61E-02
45	GO:0009654: photosystem II oxygen evolving complex	1.86E-02
46	GO:0005874: microtubule	1.91E-02
47	GO:0009706: chloroplast inner membrane	2.35E-02
48	GO:0010287: plastoglobule	2.79E-02
49	GO:0009536: plastid	2.84E-02
50	GO:0009522: photosystem I	2.97E-02
51	GO:0019898: extrinsic component of membrane	3.12E-02
52	GO:0005778: peroxisomal membrane	3.92E-02
53	GO:0005615: extracellular space	4.53E-02
54	GO:0005887: integral component of plasma membrane	4.73E-02