GO Enrichment Analysis of Co-expressed Genes with
AT2G13360
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015822: ornithine transport | 0.00E+00 |
| 2 | GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene | 0.00E+00 |
| 3 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 4 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 5 | GO:0019464: glycine decarboxylation via glycine cleavage system | 1.70E-11 |
| 6 | GO:0006546: glycine catabolic process | 1.51E-08 |
| 7 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 3.27E-06 |
| 8 | GO:0080167: response to karrikin | 2.11E-05 |
| 9 | GO:0009854: oxidative photosynthetic carbon pathway | 2.28E-05 |
| 10 | GO:0006810: transport | 4.43E-05 |
| 11 | GO:1901349: glucosinolate transport | 8.09E-05 |
| 12 | GO:0090449: phloem glucosinolate loading | 8.09E-05 |
| 13 | GO:0051775: response to redox state | 8.09E-05 |
| 14 | GO:0006659: phosphatidylserine biosynthetic process | 8.09E-05 |
| 15 | GO:0015801: aromatic amino acid transport | 8.09E-05 |
| 16 | GO:0000066: mitochondrial ornithine transport | 8.09E-05 |
| 17 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.11E-04 |
| 18 | GO:0055114: oxidation-reduction process | 1.32E-04 |
| 19 | GO:0006094: gluconeogenesis | 1.49E-04 |
| 20 | GO:0019253: reductive pentose-phosphate cycle | 1.70E-04 |
| 21 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 1.93E-04 |
| 22 | GO:0015786: UDP-glucose transport | 1.93E-04 |
| 23 | GO:0009768: photosynthesis, light harvesting in photosystem I | 2.67E-04 |
| 24 | GO:0046686: response to cadmium ion | 3.11E-04 |
| 25 | GO:0006011: UDP-glucose metabolic process | 3.24E-04 |
| 26 | GO:0000913: preprophase band assembly | 3.24E-04 |
| 27 | GO:0031022: nuclear migration along microfilament | 3.24E-04 |
| 28 | GO:0006000: fructose metabolic process | 3.24E-04 |
| 29 | GO:0006696: ergosterol biosynthetic process | 3.24E-04 |
| 30 | GO:0044375: regulation of peroxisome size | 3.24E-04 |
| 31 | GO:0005977: glycogen metabolic process | 3.24E-04 |
| 32 | GO:0015783: GDP-fucose transport | 3.24E-04 |
| 33 | GO:0016117: carotenoid biosynthetic process | 4.15E-04 |
| 34 | GO:0042631: cellular response to water deprivation | 4.48E-04 |
| 35 | GO:0006107: oxaloacetate metabolic process | 4.66E-04 |
| 36 | GO:0072334: UDP-galactose transmembrane transport | 4.66E-04 |
| 37 | GO:0010731: protein glutathionylation | 4.66E-04 |
| 38 | GO:0006168: adenine salvage | 4.66E-04 |
| 39 | GO:0006166: purine ribonucleoside salvage | 4.66E-04 |
| 40 | GO:0019676: ammonia assimilation cycle | 6.21E-04 |
| 41 | GO:0048442: sepal development | 6.21E-04 |
| 42 | GO:0009765: photosynthesis, light harvesting | 6.21E-04 |
| 43 | GO:0045727: positive regulation of translation | 6.21E-04 |
| 44 | GO:0006021: inositol biosynthetic process | 6.21E-04 |
| 45 | GO:0006734: NADH metabolic process | 6.21E-04 |
| 46 | GO:0009902: chloroplast relocation | 6.21E-04 |
| 47 | GO:0006542: glutamine biosynthetic process | 6.21E-04 |
| 48 | GO:0044209: AMP salvage | 7.86E-04 |
| 49 | GO:0016120: carotene biosynthetic process | 7.86E-04 |
| 50 | GO:0043097: pyrimidine nucleoside salvage | 7.86E-04 |
| 51 | GO:0009904: chloroplast accumulation movement | 7.86E-04 |
| 52 | GO:0010236: plastoquinone biosynthetic process | 7.86E-04 |
| 53 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 9.59E-04 |
| 54 | GO:0006206: pyrimidine nucleobase metabolic process | 9.59E-04 |
| 55 | GO:0050665: hydrogen peroxide biosynthetic process | 9.59E-04 |
| 56 | GO:0010942: positive regulation of cell death | 9.59E-04 |
| 57 | GO:0009817: defense response to fungus, incompatible interaction | 1.09E-03 |
| 58 | GO:0018298: protein-chromophore linkage | 1.09E-03 |
| 59 | GO:0045926: negative regulation of growth | 1.14E-03 |
| 60 | GO:0010076: maintenance of floral meristem identity | 1.14E-03 |
| 61 | GO:0017148: negative regulation of translation | 1.14E-03 |
| 62 | GO:0009903: chloroplast avoidance movement | 1.14E-03 |
| 63 | GO:0009645: response to low light intensity stimulus | 1.34E-03 |
| 64 | GO:0009853: photorespiration | 1.36E-03 |
| 65 | GO:0052543: callose deposition in cell wall | 1.54E-03 |
| 66 | GO:0016559: peroxisome fission | 1.54E-03 |
| 67 | GO:0048564: photosystem I assembly | 1.54E-03 |
| 68 | GO:0006002: fructose 6-phosphate metabolic process | 1.76E-03 |
| 69 | GO:0071482: cellular response to light stimulus | 1.76E-03 |
| 70 | GO:0022900: electron transport chain | 1.76E-03 |
| 71 | GO:0032544: plastid translation | 1.76E-03 |
| 72 | GO:0015979: photosynthesis | 1.96E-03 |
| 73 | GO:0006098: pentose-phosphate shunt | 1.98E-03 |
| 74 | GO:0006754: ATP biosynthetic process | 1.98E-03 |
| 75 | GO:0006259: DNA metabolic process | 2.46E-03 |
| 76 | GO:0048441: petal development | 2.46E-03 |
| 77 | GO:0009773: photosynthetic electron transport in photosystem I | 2.71E-03 |
| 78 | GO:0006265: DNA topological change | 2.71E-03 |
| 79 | GO:0043085: positive regulation of catalytic activity | 2.71E-03 |
| 80 | GO:0000272: polysaccharide catabolic process | 2.71E-03 |
| 81 | GO:0042742: defense response to bacterium | 3.02E-03 |
| 82 | GO:0009767: photosynthetic electron transport chain | 3.24E-03 |
| 83 | GO:0005986: sucrose biosynthetic process | 3.24E-03 |
| 84 | GO:0006108: malate metabolic process | 3.24E-03 |
| 85 | GO:0048440: carpel development | 3.52E-03 |
| 86 | GO:0007031: peroxisome organization | 3.81E-03 |
| 87 | GO:0042343: indole glucosinolate metabolic process | 3.81E-03 |
| 88 | GO:0006636: unsaturated fatty acid biosynthetic process | 4.10E-03 |
| 89 | GO:0009833: plant-type primary cell wall biogenesis | 4.10E-03 |
| 90 | GO:0006833: water transport | 4.10E-03 |
| 91 | GO:0008299: isoprenoid biosynthetic process | 4.70E-03 |
| 92 | GO:0009409: response to cold | 4.78E-03 |
| 93 | GO:0098542: defense response to other organism | 5.02E-03 |
| 94 | GO:0003333: amino acid transmembrane transport | 5.02E-03 |
| 95 | GO:0016226: iron-sulfur cluster assembly | 5.34E-03 |
| 96 | GO:0030433: ubiquitin-dependent ERAD pathway | 5.34E-03 |
| 97 | GO:0048443: stamen development | 6.01E-03 |
| 98 | GO:0019722: calcium-mediated signaling | 6.01E-03 |
| 99 | GO:0034220: ion transmembrane transport | 6.70E-03 |
| 100 | GO:0009741: response to brassinosteroid | 7.06E-03 |
| 101 | GO:0006662: glycerol ether metabolic process | 7.06E-03 |
| 102 | GO:0007059: chromosome segregation | 7.42E-03 |
| 103 | GO:0007018: microtubule-based movement | 7.42E-03 |
| 104 | GO:0009791: post-embryonic development | 7.79E-03 |
| 105 | GO:0019252: starch biosynthetic process | 7.79E-03 |
| 106 | GO:0008654: phospholipid biosynthetic process | 7.79E-03 |
| 107 | GO:0016032: viral process | 8.56E-03 |
| 108 | GO:0009658: chloroplast organization | 8.79E-03 |
| 109 | GO:0007267: cell-cell signaling | 9.75E-03 |
| 110 | GO:0000910: cytokinesis | 1.02E-02 |
| 111 | GO:0045454: cell redox homeostasis | 1.31E-02 |
| 112 | GO:0010218: response to far red light | 1.37E-02 |
| 113 | GO:0007568: aging | 1.41E-02 |
| 114 | GO:0006865: amino acid transport | 1.46E-02 |
| 115 | GO:0016051: carbohydrate biosynthetic process | 1.51E-02 |
| 116 | GO:0009637: response to blue light | 1.51E-02 |
| 117 | GO:0006099: tricarboxylic acid cycle | 1.56E-02 |
| 118 | GO:0034599: cellular response to oxidative stress | 1.56E-02 |
| 119 | GO:0006839: mitochondrial transport | 1.65E-02 |
| 120 | GO:0010114: response to red light | 1.80E-02 |
| 121 | GO:0000209: protein polyubiquitination | 1.86E-02 |
| 122 | GO:0009644: response to high light intensity | 1.91E-02 |
| 123 | GO:0009636: response to toxic substance | 1.96E-02 |
| 124 | GO:0000165: MAPK cascade | 2.07E-02 |
| 125 | GO:0006364: rRNA processing | 2.23E-02 |
| 126 | GO:0005975: carbohydrate metabolic process | 2.32E-02 |
| 127 | GO:0006857: oligopeptide transport | 2.34E-02 |
| 128 | GO:0006096: glycolytic process | 2.51E-02 |
| 129 | GO:0009735: response to cytokinin | 2.63E-02 |
| 130 | GO:0009620: response to fungus | 2.69E-02 |
| 131 | GO:0009416: response to light stimulus | 2.87E-02 |
| 132 | GO:0009624: response to nematode | 2.87E-02 |
| 133 | GO:0009742: brassinosteroid mediated signaling pathway | 2.99E-02 |
| 134 | GO:0009058: biosynthetic process | 3.49E-02 |
| 135 | GO:0006633: fatty acid biosynthetic process | 3.96E-02 |
| 136 | GO:0007623: circadian rhythm | 4.23E-02 |
| 137 | GO:0010468: regulation of gene expression | 4.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 2 | GO:0016719: carotene 7,8-desaturase activity | 0.00E+00 |
| 3 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 4 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 5 | GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity | 0.00E+00 |
| 6 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 7 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 8 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 9 | GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity | 0.00E+00 |
| 10 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 11 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 2.87E-12 |
| 12 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 6.24E-06 |
| 13 | GO:0048038: quinone binding | 2.75E-05 |
| 14 | GO:0051996: squalene synthase activity | 8.09E-05 |
| 15 | GO:0010313: phytochrome binding | 8.09E-05 |
| 16 | GO:0008746: NAD(P)+ transhydrogenase activity | 8.09E-05 |
| 17 | GO:0090448: glucosinolate:proton symporter activity | 8.09E-05 |
| 18 | GO:0015173: aromatic amino acid transmembrane transporter activity | 1.93E-04 |
| 19 | GO:0050347: trans-octaprenyltranstransferase activity | 1.93E-04 |
| 20 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 1.93E-04 |
| 21 | GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity | 1.93E-04 |
| 22 | GO:0000064: L-ornithine transmembrane transporter activity | 1.93E-04 |
| 23 | GO:0004512: inositol-3-phosphate synthase activity | 1.93E-04 |
| 24 | GO:0008967: phosphoglycolate phosphatase activity | 1.93E-04 |
| 25 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 1.93E-04 |
| 26 | GO:0010297: heteropolysaccharide binding | 1.93E-04 |
| 27 | GO:0031409: pigment binding | 2.16E-04 |
| 28 | GO:0032947: protein complex scaffold | 3.24E-04 |
| 29 | GO:0004148: dihydrolipoyl dehydrogenase activity | 3.24E-04 |
| 30 | GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity | 3.24E-04 |
| 31 | GO:0005457: GDP-fucose transmembrane transporter activity | 3.24E-04 |
| 32 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 4.66E-04 |
| 33 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 4.66E-04 |
| 34 | GO:0048027: mRNA 5'-UTR binding | 4.66E-04 |
| 35 | GO:0003999: adenine phosphoribosyltransferase activity | 4.66E-04 |
| 36 | GO:0005460: UDP-glucose transmembrane transporter activity | 4.66E-04 |
| 37 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 4.66E-04 |
| 38 | GO:0008891: glycolate oxidase activity | 6.21E-04 |
| 39 | GO:0005459: UDP-galactose transmembrane transporter activity | 7.86E-04 |
| 40 | GO:0005275: amine transmembrane transporter activity | 7.86E-04 |
| 41 | GO:0004356: glutamate-ammonia ligase activity | 7.86E-04 |
| 42 | GO:0016168: chlorophyll binding | 8.91E-04 |
| 43 | GO:0004332: fructose-bisphosphate aldolase activity | 9.59E-04 |
| 44 | GO:0042578: phosphoric ester hydrolase activity | 9.59E-04 |
| 45 | GO:0016615: malate dehydrogenase activity | 9.59E-04 |
| 46 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.14E-03 |
| 47 | GO:0030060: L-malate dehydrogenase activity | 1.14E-03 |
| 48 | GO:0004849: uridine kinase activity | 1.14E-03 |
| 49 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 1.76E-03 |
| 50 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 1.98E-03 |
| 51 | GO:0008047: enzyme activator activity | 2.46E-03 |
| 52 | GO:0016746: transferase activity, transferring acyl groups | 3.40E-03 |
| 53 | GO:0008266: poly(U) RNA binding | 3.52E-03 |
| 54 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 4.10E-03 |
| 55 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 4.10E-03 |
| 56 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 4.10E-03 |
| 57 | GO:0051536: iron-sulfur cluster binding | 4.40E-03 |
| 58 | GO:0047134: protein-disulfide reductase activity | 6.35E-03 |
| 59 | GO:0008080: N-acetyltransferase activity | 7.06E-03 |
| 60 | GO:0004791: thioredoxin-disulfide reductase activity | 7.42E-03 |
| 61 | GO:0010181: FMN binding | 7.42E-03 |
| 62 | GO:0050662: coenzyme binding | 7.42E-03 |
| 63 | GO:0004518: nuclease activity | 8.56E-03 |
| 64 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 8.94E-03 |
| 65 | GO:0015250: water channel activity | 1.06E-02 |
| 66 | GO:0050897: cobalt ion binding | 1.41E-02 |
| 67 | GO:0004364: glutathione transferase activity | 1.75E-02 |
| 68 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.91E-02 |
| 69 | GO:0016491: oxidoreductase activity | 1.94E-02 |
| 70 | GO:0005198: structural molecule activity | 1.96E-02 |
| 71 | GO:0051287: NAD binding | 2.07E-02 |
| 72 | GO:0016298: lipase activity | 2.29E-02 |
| 73 | GO:0003777: microtubule motor activity | 2.40E-02 |
| 74 | GO:0031625: ubiquitin protein ligase binding | 2.40E-02 |
| 75 | GO:0016887: ATPase activity | 2.51E-02 |
| 76 | GO:0022857: transmembrane transporter activity | 2.75E-02 |
| 77 | GO:0015035: protein disulfide oxidoreductase activity | 2.93E-02 |
| 78 | GO:0016758: transferase activity, transferring hexosyl groups | 3.30E-02 |
| 79 | GO:0019843: rRNA binding | 3.36E-02 |
| 80 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 3.69E-02 |
| 81 | GO:0005507: copper ion binding | 4.08E-02 |
| 82 | GO:0015297: antiporter activity | 4.09E-02 |
| 83 | GO:0008017: microtubule binding | 4.37E-02 |
| 84 | GO:0008194: UDP-glycosyltransferase activity | 4.58E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 3.23E-19 |
| 2 | GO:0005960: glycine cleavage complex | 2.87E-12 |
| 3 | GO:0009570: chloroplast stroma | 5.07E-10 |
| 4 | GO:0009941: chloroplast envelope | 6.72E-10 |
| 5 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.45E-09 |
| 6 | GO:0048046: apoplast | 2.05E-08 |
| 7 | GO:0010287: plastoglobule | 1.60E-06 |
| 8 | GO:0009535: chloroplast thylakoid membrane | 2.54E-06 |
| 9 | GO:0009579: thylakoid | 2.58E-06 |
| 10 | GO:0009782: photosystem I antenna complex | 8.09E-05 |
| 11 | GO:0009344: nitrite reductase complex [NAD(P)H] | 8.09E-05 |
| 12 | GO:0030076: light-harvesting complex | 1.93E-04 |
| 13 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 1.93E-04 |
| 14 | GO:0009509: chromoplast | 3.24E-04 |
| 15 | GO:0016020: membrane | 3.74E-04 |
| 16 | GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing) | 6.21E-04 |
| 17 | GO:0010319: stromule | 7.56E-04 |
| 18 | GO:0005778: peroxisomal membrane | 7.56E-04 |
| 19 | GO:0005777: peroxisome | 1.28E-03 |
| 20 | GO:0009534: chloroplast thylakoid | 1.38E-03 |
| 21 | GO:0005779: integral component of peroxisomal membrane | 1.76E-03 |
| 22 | GO:0019013: viral nucleocapsid | 3.24E-03 |
| 23 | GO:0030095: chloroplast photosystem II | 3.52E-03 |
| 24 | GO:0005623: cell | 4.24E-03 |
| 25 | GO:0009654: photosystem II oxygen evolving complex | 4.70E-03 |
| 26 | GO:0005871: kinesin complex | 6.35E-03 |
| 27 | GO:0009522: photosystem I | 7.42E-03 |
| 28 | GO:0009504: cell plate | 7.79E-03 |
| 29 | GO:0009523: photosystem II | 7.79E-03 |
| 30 | GO:0019898: extrinsic component of membrane | 7.79E-03 |
| 31 | GO:0005694: chromosome | 8.56E-03 |
| 32 | GO:0009295: nucleoid | 9.75E-03 |
| 33 | GO:0031969: chloroplast membrane | 1.09E-02 |
| 34 | GO:0009707: chloroplast outer membrane | 1.27E-02 |
| 35 | GO:0005819: spindle | 1.60E-02 |
| 36 | GO:0009536: plastid | 1.77E-02 |
| 37 | GO:0005887: integral component of plasma membrane | 2.20E-02 |
| 38 | GO:0005747: mitochondrial respiratory chain complex I | 2.57E-02 |
| 39 | GO:0009706: chloroplast inner membrane | 2.87E-02 |
| 40 | GO:0009543: chloroplast thylakoid lumen | 3.36E-02 |
| 41 | GO:0009524: phragmoplast | 3.49E-02 |
| 42 | GO:0005759: mitochondrial matrix | 3.96E-02 |