GO Enrichment Analysis of Co-expressed Genes with
AT2G04039
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 2 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 4.11E-07 |
| 3 | GO:0006098: pentose-phosphate shunt | 9.86E-06 |
| 4 | GO:0009773: photosynthetic electron transport in photosystem I | 1.81E-05 |
| 5 | GO:0051775: response to redox state | 2.41E-05 |
| 6 | GO:0006094: gluconeogenesis | 2.52E-05 |
| 7 | GO:0071484: cellular response to light intensity | 1.62E-04 |
| 8 | GO:0006107: oxaloacetate metabolic process | 1.62E-04 |
| 9 | GO:0006734: NADH metabolic process | 2.21E-04 |
| 10 | GO:0080167: response to karrikin | 2.28E-04 |
| 11 | GO:0043097: pyrimidine nucleoside salvage | 2.84E-04 |
| 12 | GO:0010117: photoprotection | 2.84E-04 |
| 13 | GO:0006206: pyrimidine nucleobase metabolic process | 3.51E-04 |
| 14 | GO:0009854: oxidative photosynthetic carbon pathway | 4.20E-04 |
| 15 | GO:0010196: nonphotochemical quenching | 4.92E-04 |
| 16 | GO:0006096: glycolytic process | 6.17E-04 |
| 17 | GO:0071482: cellular response to light stimulus | 6.45E-04 |
| 18 | GO:0009821: alkaloid biosynthetic process | 7.25E-04 |
| 19 | GO:0009058: biosynthetic process | 9.57E-04 |
| 20 | GO:0018119: peptidyl-cysteine S-nitrosylation | 9.78E-04 |
| 21 | GO:0000038: very long-chain fatty acid metabolic process | 9.78E-04 |
| 22 | GO:0006108: malate metabolic process | 1.16E-03 |
| 23 | GO:0019253: reductive pentose-phosphate cycle | 1.25E-03 |
| 24 | GO:0046688: response to copper ion | 1.35E-03 |
| 25 | GO:0010025: wax biosynthetic process | 1.45E-03 |
| 26 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.45E-03 |
| 27 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.87E-03 |
| 28 | GO:0006817: phosphate ion transport | 2.10E-03 |
| 29 | GO:0042335: cuticle development | 2.33E-03 |
| 30 | GO:0042631: cellular response to water deprivation | 2.33E-03 |
| 31 | GO:0015986: ATP synthesis coupled proton transport | 2.57E-03 |
| 32 | GO:0006810: transport | 3.04E-03 |
| 33 | GO:0010027: thylakoid membrane organization | 3.63E-03 |
| 34 | GO:0016126: sterol biosynthetic process | 3.63E-03 |
| 35 | GO:0042128: nitrate assimilation | 3.90E-03 |
| 36 | GO:0055114: oxidation-reduction process | 4.70E-03 |
| 37 | GO:0009853: photorespiration | 5.11E-03 |
| 38 | GO:0006099: tricarboxylic acid cycle | 5.26E-03 |
| 39 | GO:0009735: response to cytokinin | 5.50E-03 |
| 40 | GO:0000209: protein polyubiquitination | 6.25E-03 |
| 41 | GO:0009644: response to high light intensity | 6.42E-03 |
| 42 | GO:0006857: oligopeptide transport | 7.84E-03 |
| 43 | GO:0042742: defense response to bacterium | 1.22E-02 |
| 44 | GO:0006633: fatty acid biosynthetic process | 1.31E-02 |
| 45 | GO:0009409: response to cold | 1.65E-02 |
| 46 | GO:0009826: unidimensional cell growth | 1.86E-02 |
| 47 | GO:0046686: response to cadmium ion | 1.91E-02 |
| 48 | GO:0009658: chloroplast organization | 1.92E-02 |
| 49 | GO:0042254: ribosome biogenesis | 1.94E-02 |
| 50 | GO:0015979: photosynthesis | 2.45E-02 |
| 51 | GO:0045454: cell redox homeostasis | 2.54E-02 |
| 52 | GO:0032259: methylation | 2.86E-02 |
| 53 | GO:0009753: response to jasmonic acid | 3.10E-02 |
| 54 | GO:0008152: metabolic process | 3.16E-02 |
| 55 | GO:0009416: response to light stimulus | 4.43E-02 |
| 56 | GO:0009611: response to wounding | 4.50E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 2 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 3 | GO:0051738: xanthophyll binding | 0.00E+00 |
| 4 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 5 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 6 | GO:0009673: low-affinity phosphate transmembrane transporter activity | 0.00E+00 |
| 7 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 8.03E-07 |
| 8 | GO:0048038: quinone binding | 1.95E-06 |
| 9 | GO:0004332: fructose-bisphosphate aldolase activity | 2.16E-06 |
| 10 | GO:0008746: NAD(P)+ transhydrogenase activity | 2.41E-05 |
| 11 | GO:0018708: thiol S-methyltransferase activity | 6.16E-05 |
| 12 | GO:0004506: squalene monooxygenase activity | 2.21E-04 |
| 13 | GO:0016615: malate dehydrogenase activity | 3.51E-04 |
| 14 | GO:0030060: L-malate dehydrogenase activity | 4.20E-04 |
| 15 | GO:0004849: uridine kinase activity | 4.20E-04 |
| 16 | GO:0015293: symporter activity | 4.40E-04 |
| 17 | GO:0043022: ribosome binding | 5.68E-04 |
| 18 | GO:0015078: hydrogen ion transmembrane transporter activity | 6.45E-04 |
| 19 | GO:0016844: strictosidine synthase activity | 8.07E-04 |
| 20 | GO:0005315: inorganic phosphate transmembrane transporter activity | 1.16E-03 |
| 21 | GO:0008266: poly(U) RNA binding | 1.25E-03 |
| 22 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 1.45E-03 |
| 23 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 1.45E-03 |
| 24 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 1.45E-03 |
| 25 | GO:0022891: substrate-specific transmembrane transporter activity | 1.98E-03 |
| 26 | GO:0016491: oxidoreductase activity | 2.65E-03 |
| 27 | GO:0009055: electron carrier activity | 3.65E-03 |
| 28 | GO:0016168: chlorophyll binding | 3.76E-03 |
| 29 | GO:0051287: NAD binding | 6.94E-03 |
| 30 | GO:0031625: ubiquitin protein ligase binding | 8.02E-03 |
| 31 | GO:0015035: protein disulfide oxidoreductase activity | 9.75E-03 |
| 32 | GO:0030170: pyridoxal phosphate binding | 1.20E-02 |
| 33 | GO:0008168: methyltransferase activity | 1.86E-02 |
| 34 | GO:0016788: hydrolase activity, acting on ester bonds | 1.94E-02 |
| 35 | GO:0050660: flavin adenine dinucleotide binding | 2.12E-02 |
| 36 | GO:0061630: ubiquitin protein ligase activity | 2.31E-02 |
| 37 | GO:0004871: signal transducer activity | 2.62E-02 |
| 38 | GO:0016787: hydrolase activity | 2.62E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.87E-08 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 4.90E-08 |
| 3 | GO:0009579: thylakoid | 2.87E-07 |
| 4 | GO:0009534: chloroplast thylakoid | 2.96E-07 |
| 5 | GO:0009507: chloroplast | 3.71E-07 |
| 6 | GO:0009941: chloroplast envelope | 1.09E-05 |
| 7 | GO:0009517: PSII associated light-harvesting complex II | 2.21E-04 |
| 8 | GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o) | 3.51E-04 |
| 9 | GO:0048046: apoplast | 3.72E-04 |
| 10 | GO:0010287: plastoglobule | 8.66E-04 |
| 11 | GO:0042651: thylakoid membrane | 1.65E-03 |
| 12 | GO:0009523: photosystem II | 2.70E-03 |
| 13 | GO:0010319: stromule | 3.35E-03 |
| 14 | GO:0009570: chloroplast stroma | 4.73E-03 |
| 15 | GO:0005783: endoplasmic reticulum | 5.21E-03 |
| 16 | GO:0031977: thylakoid lumen | 5.75E-03 |
| 17 | GO:0022626: cytosolic ribosome | 5.76E-03 |
| 18 | GO:0009706: chloroplast inner membrane | 9.56E-03 |
| 19 | GO:0016020: membrane | 1.38E-02 |
| 20 | GO:0046658: anchored component of plasma membrane | 1.71E-02 |
| 21 | GO:0031969: chloroplast membrane | 2.23E-02 |
| 22 | GO:0016021: integral component of membrane | 2.48E-02 |
| 23 | GO:0005777: peroxisome | 4.89E-02 |