GO Enrichment Analysis of Co-expressed Genes with
AT2G03550
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
2 | GO:0090393: sepal giant cell development | 0.00E+00 |
3 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
4 | GO:0071370: cellular response to gibberellin stimulus | 0.00E+00 |
5 | GO:0051881: regulation of mitochondrial membrane potential | 0.00E+00 |
6 | GO:0019253: reductive pentose-phosphate cycle | 9.18E-07 |
7 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 2.70E-06 |
8 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 2.70E-06 |
9 | GO:0006810: transport | 5.18E-06 |
10 | GO:0006000: fructose metabolic process | 9.82E-06 |
11 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.13E-05 |
12 | GO:0009773: photosynthetic electron transport in photosystem I | 2.13E-05 |
13 | GO:0009409: response to cold | 2.28E-05 |
14 | GO:2000122: negative regulation of stomatal complex development | 4.05E-05 |
15 | GO:0006546: glycine catabolic process | 4.05E-05 |
16 | GO:0010037: response to carbon dioxide | 4.05E-05 |
17 | GO:0015976: carbon utilization | 4.05E-05 |
18 | GO:0019464: glycine decarboxylation via glycine cleavage system | 4.05E-05 |
19 | GO:0005985: sucrose metabolic process | 4.89E-05 |
20 | GO:0015979: photosynthesis | 1.13E-04 |
21 | GO:0016117: carotenoid biosynthetic process | 1.53E-04 |
22 | GO:0090449: phloem glucosinolate loading | 2.41E-04 |
23 | GO:0006659: phosphatidylserine biosynthetic process | 2.41E-04 |
24 | GO:0010597: green leaf volatile biosynthetic process | 2.41E-04 |
25 | GO:1901349: glucosinolate transport | 2.41E-04 |
26 | GO:0008152: metabolic process | 2.55E-04 |
27 | GO:0032544: plastid translation | 2.70E-04 |
28 | GO:0006002: fructose 6-phosphate metabolic process | 2.70E-04 |
29 | GO:0071482: cellular response to light stimulus | 2.70E-04 |
30 | GO:0015786: UDP-glucose transport | 5.34E-04 |
31 | GO:2000123: positive regulation of stomatal complex development | 5.34E-04 |
32 | GO:0006094: gluconeogenesis | 6.81E-04 |
33 | GO:0009767: photosynthetic electron transport chain | 6.81E-04 |
34 | GO:0005986: sucrose biosynthetic process | 6.81E-04 |
35 | GO:0009853: photorespiration | 7.93E-04 |
36 | GO:0071492: cellular response to UV-A | 8.68E-04 |
37 | GO:0006696: ergosterol biosynthetic process | 8.68E-04 |
38 | GO:0015783: GDP-fucose transport | 8.68E-04 |
39 | GO:0090506: axillary shoot meristem initiation | 8.68E-04 |
40 | GO:0009617: response to bacterium | 1.17E-03 |
41 | GO:2001141: regulation of RNA biosynthetic process | 1.24E-03 |
42 | GO:0032877: positive regulation of DNA endoreduplication | 1.24E-03 |
43 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.24E-03 |
44 | GO:0072334: UDP-galactose transmembrane transport | 1.24E-03 |
45 | GO:0080092: regulation of pollen tube growth | 1.38E-03 |
46 | GO:0031122: cytoplasmic microtubule organization | 1.65E-03 |
47 | GO:2000038: regulation of stomatal complex development | 1.65E-03 |
48 | GO:0034440: lipid oxidation | 1.65E-03 |
49 | GO:0006021: inositol biosynthetic process | 1.65E-03 |
50 | GO:0009902: chloroplast relocation | 1.65E-03 |
51 | GO:0006542: glutamine biosynthetic process | 1.65E-03 |
52 | GO:0019676: ammonia assimilation cycle | 1.65E-03 |
53 | GO:0071486: cellular response to high light intensity | 1.65E-03 |
54 | GO:0009765: photosynthesis, light harvesting | 1.65E-03 |
55 | GO:0045727: positive regulation of translation | 1.65E-03 |
56 | GO:0009658: chloroplast organization | 1.74E-03 |
57 | GO:0042631: cellular response to water deprivation | 1.91E-03 |
58 | GO:0046686: response to cadmium ion | 2.09E-03 |
59 | GO:0016120: carotene biosynthetic process | 2.11E-03 |
60 | GO:0006656: phosphatidylcholine biosynthetic process | 2.11E-03 |
61 | GO:0016123: xanthophyll biosynthetic process | 2.11E-03 |
62 | GO:0010375: stomatal complex patterning | 2.11E-03 |
63 | GO:0009735: response to cytokinin | 2.32E-03 |
64 | GO:0009791: post-embryonic development | 2.37E-03 |
65 | GO:0010190: cytochrome b6f complex assembly | 2.60E-03 |
66 | GO:0009117: nucleotide metabolic process | 2.60E-03 |
67 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 2.60E-03 |
68 | GO:0016554: cytidine to uridine editing | 2.60E-03 |
69 | GO:0007264: small GTPase mediated signal transduction | 2.71E-03 |
70 | GO:0042742: defense response to bacterium | 2.76E-03 |
71 | GO:0010067: procambium histogenesis | 3.12E-03 |
72 | GO:1901259: chloroplast rRNA processing | 3.12E-03 |
73 | GO:0017148: negative regulation of translation | 3.12E-03 |
74 | GO:0009854: oxidative photosynthetic carbon pathway | 3.12E-03 |
75 | GO:0009955: adaxial/abaxial pattern specification | 3.12E-03 |
76 | GO:0030643: cellular phosphate ion homeostasis | 3.12E-03 |
77 | GO:0045454: cell redox homeostasis | 3.18E-03 |
78 | GO:0007267: cell-cell signaling | 3.26E-03 |
79 | GO:0080027: response to herbivore | 3.68E-03 |
80 | GO:0007155: cell adhesion | 4.27E-03 |
81 | GO:0008610: lipid biosynthetic process | 4.27E-03 |
82 | GO:0009817: defense response to fungus, incompatible interaction | 4.77E-03 |
83 | GO:0009657: plastid organization | 4.89E-03 |
84 | GO:0022900: electron transport chain | 4.89E-03 |
85 | GO:0010119: regulation of stomatal movement | 5.51E-03 |
86 | GO:0010206: photosystem II repair | 5.54E-03 |
87 | GO:0006754: ATP biosynthetic process | 5.54E-03 |
88 | GO:1900865: chloroplast RNA modification | 6.21E-03 |
89 | GO:0006839: mitochondrial transport | 6.89E-03 |
90 | GO:0019538: protein metabolic process | 6.92E-03 |
91 | GO:0043069: negative regulation of programmed cell death | 6.92E-03 |
92 | GO:0019684: photosynthesis, light reaction | 7.65E-03 |
93 | GO:0006415: translational termination | 7.65E-03 |
94 | GO:0006352: DNA-templated transcription, initiation | 7.65E-03 |
95 | GO:0000272: polysaccharide catabolic process | 7.65E-03 |
96 | GO:0009744: response to sucrose | 7.79E-03 |
97 | GO:0009644: response to high light intensity | 8.43E-03 |
98 | GO:0009725: response to hormone | 9.20E-03 |
99 | GO:0010223: secondary shoot formation | 1.00E-02 |
100 | GO:0009887: animal organ morphogenesis | 1.00E-02 |
101 | GO:0009611: response to wounding | 1.08E-02 |
102 | GO:0009969: xyloglucan biosynthetic process | 1.09E-02 |
103 | GO:0080167: response to karrikin | 1.13E-02 |
104 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.17E-02 |
105 | GO:0009833: plant-type primary cell wall biogenesis | 1.17E-02 |
106 | GO:0006071: glycerol metabolic process | 1.17E-02 |
107 | GO:0006096: glycolytic process | 1.25E-02 |
108 | GO:0055114: oxidation-reduction process | 1.28E-02 |
109 | GO:0009695: jasmonic acid biosynthetic process | 1.35E-02 |
110 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.35E-02 |
111 | GO:0031408: oxylipin biosynthetic process | 1.45E-02 |
112 | GO:0061077: chaperone-mediated protein folding | 1.45E-02 |
113 | GO:0042545: cell wall modification | 1.46E-02 |
114 | GO:0009294: DNA mediated transformation | 1.64E-02 |
115 | GO:0001944: vasculature development | 1.64E-02 |
116 | GO:0006284: base-excision repair | 1.74E-02 |
117 | GO:0019722: calcium-mediated signaling | 1.74E-02 |
118 | GO:0010089: xylem development | 1.74E-02 |
119 | GO:0005975: carbohydrate metabolic process | 1.91E-02 |
120 | GO:0080022: primary root development | 1.95E-02 |
121 | GO:0010087: phloem or xylem histogenesis | 1.95E-02 |
122 | GO:0007059: chromosome segregation | 2.16E-02 |
123 | GO:0019252: starch biosynthetic process | 2.27E-02 |
124 | GO:0008654: phospholipid biosynthetic process | 2.27E-02 |
125 | GO:0006633: fatty acid biosynthetic process | 2.37E-02 |
126 | GO:0071554: cell wall organization or biogenesis | 2.38E-02 |
127 | GO:0007623: circadian rhythm | 2.60E-02 |
128 | GO:0045490: pectin catabolic process | 2.60E-02 |
129 | GO:1901657: glycosyl compound metabolic process | 2.62E-02 |
130 | GO:0051607: defense response to virus | 2.98E-02 |
131 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 3.23E-02 |
132 | GO:0009738: abscisic acid-activated signaling pathway | 3.65E-02 |
133 | GO:0018298: protein-chromophore linkage | 3.75E-02 |
134 | GO:0009407: toxin catabolic process | 4.01E-02 |
135 | GO:0010218: response to far red light | 4.01E-02 |
136 | GO:0007568: aging | 4.15E-02 |
137 | GO:0016051: carbohydrate biosynthetic process | 4.43E-02 |
138 | GO:0009637: response to blue light | 4.43E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0052667: phosphomethylethanolamine N-methyltransferase activity | 0.00E+00 |
2 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
3 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
4 | GO:0008962: phosphatidylglycerophosphatase activity | 0.00E+00 |
5 | GO:0046905: phytoene synthase activity | 0.00E+00 |
6 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
7 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
8 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
9 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
10 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
11 | GO:0051920: peroxiredoxin activity | 1.86E-06 |
12 | GO:0004618: phosphoglycerate kinase activity | 2.70E-06 |
13 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 2.70E-06 |
14 | GO:0016209: antioxidant activity | 4.58E-06 |
15 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 2.23E-05 |
16 | GO:0005528: FK506 binding | 6.85E-05 |
17 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.30E-04 |
18 | GO:0008568: microtubule-severing ATPase activity | 2.41E-04 |
19 | GO:0051996: squalene synthase activity | 2.41E-04 |
20 | GO:0010313: phytochrome binding | 2.41E-04 |
21 | GO:0090448: glucosinolate:proton symporter activity | 2.41E-04 |
22 | GO:0047259: glucomannan 4-beta-mannosyltransferase activity | 2.41E-04 |
23 | GO:0004560: alpha-L-fucosidase activity | 2.41E-04 |
24 | GO:0080132: fatty acid alpha-hydroxylase activity | 2.41E-04 |
25 | GO:0004575: sucrose alpha-glucosidase activity | 3.89E-04 |
26 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 5.25E-04 |
27 | GO:0004512: inositol-3-phosphate synthase activity | 5.34E-04 |
28 | GO:0008967: phosphoglycolate phosphatase activity | 5.34E-04 |
29 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 5.34E-04 |
30 | GO:0000234: phosphoethanolamine N-methyltransferase activity | 5.34E-04 |
31 | GO:0042389: omega-3 fatty acid desaturase activity | 5.34E-04 |
32 | GO:0010297: heteropolysaccharide binding | 5.34E-04 |
33 | GO:0004047: aminomethyltransferase activity | 5.34E-04 |
34 | GO:0004089: carbonate dehydratase activity | 6.81E-04 |
35 | GO:0031072: heat shock protein binding | 6.81E-04 |
36 | GO:0004148: dihydrolipoyl dehydrogenase activity | 8.68E-04 |
37 | GO:0016165: linoleate 13S-lipoxygenase activity | 8.68E-04 |
38 | GO:0005457: GDP-fucose transmembrane transporter activity | 8.68E-04 |
39 | GO:0035529: NADH pyrophosphatase activity | 1.24E-03 |
40 | GO:0016149: translation release factor activity, codon specific | 1.24E-03 |
41 | GO:0005460: UDP-glucose transmembrane transporter activity | 1.24E-03 |
42 | GO:0048027: mRNA 5'-UTR binding | 1.24E-03 |
43 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.31E-03 |
44 | GO:0004659: prenyltransferase activity | 1.65E-03 |
45 | GO:0001053: plastid sigma factor activity | 1.65E-03 |
46 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.65E-03 |
47 | GO:0008453: alanine-glyoxylate transaminase activity | 1.65E-03 |
48 | GO:0016987: sigma factor activity | 1.65E-03 |
49 | GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | 2.11E-03 |
50 | GO:0004356: glutamate-ammonia ligase activity | 2.11E-03 |
51 | GO:0008725: DNA-3-methyladenine glycosylase activity | 2.11E-03 |
52 | GO:0005459: UDP-galactose transmembrane transporter activity | 2.11E-03 |
53 | GO:0022857: transmembrane transporter activity | 2.28E-03 |
54 | GO:0048038: quinone binding | 2.54E-03 |
55 | GO:0042578: phosphoric ester hydrolase activity | 2.60E-03 |
56 | GO:0008200: ion channel inhibitor activity | 2.60E-03 |
57 | GO:0080030: methyl indole-3-acetate esterase activity | 2.60E-03 |
58 | GO:0051753: mannan synthase activity | 3.12E-03 |
59 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 3.12E-03 |
60 | GO:0019843: rRNA binding | 3.28E-03 |
61 | GO:0003824: catalytic activity | 3.31E-03 |
62 | GO:0043295: glutathione binding | 3.68E-03 |
63 | GO:0016168: chlorophyll binding | 3.87E-03 |
64 | GO:0016787: hydrolase activity | 4.18E-03 |
65 | GO:0004564: beta-fructofuranosidase activity | 4.27E-03 |
66 | GO:0009055: electron carrier activity | 4.87E-03 |
67 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 4.89E-03 |
68 | GO:0008135: translation factor activity, RNA binding | 4.89E-03 |
69 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 5.54E-03 |
70 | GO:0003747: translation release factor activity | 5.54E-03 |
71 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 5.54E-03 |
72 | GO:0003746: translation elongation factor activity | 6.04E-03 |
73 | GO:0004860: protein kinase inhibitor activity | 7.65E-03 |
74 | GO:0005509: calcium ion binding | 8.10E-03 |
75 | GO:0008378: galactosyltransferase activity | 8.41E-03 |
76 | GO:0051537: 2 iron, 2 sulfur cluster binding | 8.43E-03 |
77 | GO:0004601: peroxidase activity | 8.61E-03 |
78 | GO:0004565: beta-galactosidase activity | 9.20E-03 |
79 | GO:0008266: poly(U) RNA binding | 1.00E-02 |
80 | GO:0008083: growth factor activity | 1.00E-02 |
81 | GO:0045330: aspartyl esterase activity | 1.17E-02 |
82 | GO:0031409: pigment binding | 1.17E-02 |
83 | GO:0004857: enzyme inhibitor activity | 1.26E-02 |
84 | GO:0043424: protein histidine kinase binding | 1.35E-02 |
85 | GO:0030599: pectinesterase activity | 1.41E-02 |
86 | GO:0033612: receptor serine/threonine kinase binding | 1.45E-02 |
87 | GO:0051082: unfolded protein binding | 1.50E-02 |
88 | GO:0016491: oxidoreductase activity | 1.50E-02 |
89 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.59E-02 |
90 | GO:0022891: substrate-specific transmembrane transporter activity | 1.64E-02 |
91 | GO:0003756: protein disulfide isomerase activity | 1.74E-02 |
92 | GO:0005102: receptor binding | 1.84E-02 |
93 | GO:0050662: coenzyme binding | 2.16E-02 |
94 | GO:0004872: receptor activity | 2.27E-02 |
95 | GO:0019901: protein kinase binding | 2.27E-02 |
96 | GO:0004518: nuclease activity | 2.50E-02 |
97 | GO:0016759: cellulose synthase activity | 2.73E-02 |
98 | GO:0008483: transaminase activity | 2.85E-02 |
99 | GO:0008194: UDP-glycosyltransferase activity | 2.91E-02 |
100 | GO:0016597: amino acid binding | 2.98E-02 |
101 | GO:0016413: O-acetyltransferase activity | 2.98E-02 |
102 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 3.35E-02 |
103 | GO:0004683: calmodulin-dependent protein kinase activity | 3.48E-02 |
104 | GO:0102483: scopolin beta-glucosidase activity | 3.48E-02 |
105 | GO:0008236: serine-type peptidase activity | 3.61E-02 |
106 | GO:0004222: metalloendopeptidase activity | 4.01E-02 |
107 | GO:0016788: hydrolase activity, acting on ester bonds | 4.09E-02 |
108 | GO:0050897: cobalt ion binding | 4.15E-02 |
109 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 4.15E-02 |
110 | GO:0050660: flavin adenine dinucleotide binding | 4.63E-02 |
111 | GO:0008422: beta-glucosidase activity | 4.71E-02 |
112 | GO:0016740: transferase activity | 4.84E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0009344: nitrite reductase complex [NAD(P)H] | 0.00E+00 |
2 | GO:0009507: chloroplast | 3.12E-29 |
3 | GO:0009535: chloroplast thylakoid membrane | 6.36E-18 |
4 | GO:0009941: chloroplast envelope | 1.77E-13 |
5 | GO:0009570: chloroplast stroma | 5.78E-13 |
6 | GO:0048046: apoplast | 1.27E-11 |
7 | GO:0009579: thylakoid | 3.93E-10 |
8 | GO:0009543: chloroplast thylakoid lumen | 6.13E-10 |
9 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 8.47E-10 |
10 | GO:0010319: stromule | 2.35E-08 |
11 | GO:0009654: photosystem II oxygen evolving complex | 2.50E-06 |
12 | GO:0009534: chloroplast thylakoid | 6.24E-06 |
13 | GO:0005960: glycine cleavage complex | 2.23E-05 |
14 | GO:0005775: vacuolar lumen | 2.23E-05 |
15 | GO:0030095: chloroplast photosystem II | 4.06E-05 |
16 | GO:0019898: extrinsic component of membrane | 2.33E-04 |
17 | GO:0009505: plant-type cell wall | 3.75E-04 |
18 | GO:0010287: plastoglobule | 5.10E-04 |
19 | GO:0042170: plastid membrane | 5.34E-04 |
20 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 5.34E-04 |
21 | GO:0000325: plant-type vacuole | 7.06E-04 |
22 | GO:0005853: eukaryotic translation elongation factor 1 complex | 8.68E-04 |
23 | GO:0009706: chloroplast inner membrane | 2.47E-03 |
24 | GO:0010168: ER body | 2.60E-03 |
25 | GO:0009533: chloroplast stromal thylakoid | 3.68E-03 |
26 | GO:0009539: photosystem II reaction center | 4.89E-03 |
27 | GO:0005763: mitochondrial small ribosomal subunit | 5.54E-03 |
28 | GO:0016020: membrane | 6.32E-03 |
29 | GO:0016324: apical plasma membrane | 6.92E-03 |
30 | GO:0031902: late endosome membrane | 7.18E-03 |
31 | GO:0031977: thylakoid lumen | 7.18E-03 |
32 | GO:0005765: lysosomal membrane | 7.65E-03 |
33 | GO:0000311: plastid large ribosomal subunit | 8.41E-03 |
34 | GO:0009508: plastid chromosome | 9.20E-03 |
35 | GO:0031012: extracellular matrix | 9.20E-03 |
36 | GO:0030076: light-harvesting complex | 1.09E-02 |
37 | GO:0031969: chloroplast membrane | 1.13E-02 |
38 | GO:0005875: microtubule associated complex | 1.17E-02 |
39 | GO:0005773: vacuole | 1.17E-02 |
40 | GO:0009522: photosystem I | 2.16E-02 |
41 | GO:0009523: photosystem II | 2.27E-02 |
42 | GO:0009295: nucleoid | 2.85E-02 |
43 | GO:0005840: ribosome | 3.21E-02 |
44 | GO:0005576: extracellular region | 3.55E-02 |
45 | GO:0009707: chloroplast outer membrane | 3.75E-02 |
46 | GO:0005777: peroxisome | 4.50E-02 |
47 | GO:0000139: Golgi membrane | 4.64E-02 |
48 | GO:0005819: spindle | 4.71E-02 |