co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G02930

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0015690: aluminum cation transport	0.00E+00
2	GO:0030149: sphingolipid catabolic process	0.00E+00
3	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
4	GO:0072722: response to amitrole	0.00E+00
5	GO:0009617: response to bacterium	6.12E-12
6	GO:0042742: defense response to bacterium	1.78E-08
7	GO:0009682: induced systemic resistance	6.53E-08
8	GO:0071456: cellular response to hypoxia	7.30E-07
9	GO:0010120: camalexin biosynthetic process	1.80E-06
10	GO:0043069: negative regulation of programmed cell death	4.66E-06
11	GO:0052544: defense response by callose deposition in cell wall	6.06E-06
12	GO:0050832: defense response to fungus	2.41E-05
13	GO:0009697: salicylic acid biosynthetic process	2.66E-05
14	GO:0006564: L-serine biosynthetic process	2.66E-05
15	GO:0009625: response to insect	3.89E-05
16	GO:0009759: indole glucosinolate biosynthetic process	3.99E-05
17	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	9.72E-05
18	GO:0006979: response to oxidative stress	1.32E-04
19	GO:0051245: negative regulation of cellular defense response	1.42E-04
20	GO:0009609: response to symbiotic bacterium	1.42E-04
21	GO:0009700: indole phytoalexin biosynthetic process	1.42E-04
22	GO:0055081: anion homeostasis	1.42E-04
23	GO:0080120: CAAX-box protein maturation	1.42E-04
24	GO:0071586: CAAX-box protein processing	1.42E-04
25	GO:0010112: regulation of systemic acquired resistance	1.50E-04
26	GO:0009651: response to salt stress	1.77E-04
27	GO:0009627: systemic acquired resistance	1.78E-04
28	GO:0006032: chitin catabolic process	2.13E-04
29	GO:0009817: defense response to fungus, incompatible interaction	2.21E-04
30	GO:0000272: polysaccharide catabolic process	2.49E-04
31	GO:0009407: toxin catabolic process	2.53E-04
32	GO:0002215: defense response to nematode	3.25E-04
33	GO:0019752: carboxylic acid metabolic process	3.25E-04
34	GO:0015914: phospholipid transport	3.25E-04
35	GO:0090057: root radial pattern formation	3.25E-04
36	GO:0070588: calcium ion transmembrane transport	4.15E-04
37	GO:0000162: tryptophan biosynthetic process	4.63E-04
38	GO:0009636: response to toxic substance	4.93E-04
39	GO:0080147: root hair cell development	5.13E-04
40	GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening	5.33E-04
41	GO:0051176: positive regulation of sulfur metabolic process	5.33E-04
42	GO:0010272: response to silver ion	5.33E-04
43	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	5.33E-04
44	GO:0009414: response to water deprivation	5.84E-04
45	GO:0016998: cell wall macromolecule catabolic process	6.19E-04
46	GO:0009723: response to ethylene	6.98E-04
47	GO:0043207: response to external biotic stimulus	7.63E-04
48	GO:0006612: protein targeting to membrane	7.63E-04
49	GO:0001676: long-chain fatty acid metabolic process	7.63E-04
50	GO:0046836: glycolipid transport	7.63E-04
51	GO:0010116: positive regulation of abscisic acid biosynthetic process	7.63E-04
52	GO:0048194: Golgi vesicle budding	7.63E-04
53	GO:0007231: osmosensory signaling pathway	7.63E-04
54	GO:0009737: response to abscisic acid	7.80E-04
55	GO:0009626: plant-type hypersensitive response	8.28E-04
56	GO:0042391: regulation of membrane potential	9.27E-04
57	GO:0006536: glutamate metabolic process	1.01E-03
58	GO:0010363: regulation of plant-type hypersensitive response	1.01E-03
59	GO:0010508: positive regulation of autophagy	1.01E-03
60	GO:0010107: potassium ion import	1.01E-03
61	GO:0033500: carbohydrate homeostasis	1.01E-03
62	GO:0080142: regulation of salicylic acid biosynthetic process	1.01E-03
63	GO:1901141: regulation of lignin biosynthetic process	1.01E-03
64	GO:0046345: abscisic acid catabolic process	1.01E-03
65	GO:0009646: response to absence of light	1.07E-03
66	GO:0009851: auxin biosynthetic process	1.14E-03
67	GO:0060918: auxin transport	1.57E-03
68	GO:0009117: nucleotide metabolic process	1.57E-03
69	GO:0009615: response to virus	1.74E-03
70	GO:0009816: defense response to bacterium, incompatible interaction	1.84E-03
71	GO:0010150: leaf senescence	1.90E-03
72	GO:0055114: oxidation-reduction process	2.17E-03
73	GO:0070370: cellular heat acclimation	2.21E-03
74	GO:1902074: response to salt	2.21E-03
75	GO:0009610: response to symbiotic fungus	2.21E-03
76	GO:0080027: response to herbivore	2.21E-03
77	GO:0009061: anaerobic respiration	2.56E-03
78	GO:0009819: drought recovery	2.56E-03
79	GO:0006102: isocitrate metabolic process	2.56E-03
80	GO:0010204: defense response signaling pathway, resistance gene-independent	2.93E-03
81	GO:0043562: cellular response to nitrogen levels	2.93E-03
82	GO:0009699: phenylpropanoid biosynthetic process	2.93E-03
83	GO:0034765: regulation of ion transmembrane transport	3.31E-03
84	GO:0090333: regulation of stomatal closure	3.31E-03
85	GO:0006970: response to osmotic stress	3.63E-03
86	GO:0051707: response to other organism	3.68E-03
87	GO:0030042: actin filament depolymerization	3.71E-03
88	GO:0009870: defense response signaling pathway, resistance gene-dependent	4.12E-03
89	GO:0009688: abscisic acid biosynthetic process	4.12E-03
90	GO:0010200: response to chitin	4.53E-03
91	GO:0072593: reactive oxygen species metabolic process	4.55E-03
92	GO:0048229: gametophyte development	4.55E-03
93	GO:0002213: defense response to insect	4.99E-03
94	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	4.99E-03
95	GO:0046686: response to cadmium ion	5.37E-03
96	GO:0034605: cellular response to heat	5.92E-03
97	GO:0006541: glutamine metabolic process	5.92E-03
98	GO:0002237: response to molecule of bacterial origin	5.92E-03
99	GO:0006952: defense response	6.24E-03
100	GO:0042343: indole glucosinolate metabolic process	6.41E-03
101	GO:0010053: root epidermal cell differentiation	6.41E-03
102	GO:0009751: response to salicylic acid	6.98E-03
103	GO:0009408: response to heat	7.11E-03
104	GO:0009863: salicylic acid mediated signaling pathway	7.42E-03
105	GO:2000377: regulation of reactive oxygen species metabolic process	7.42E-03
106	GO:0048278: vesicle docking	8.49E-03
107	GO:0009814: defense response, incompatible interaction	9.05E-03
108	GO:0016226: iron-sulfur cluster assembly	9.05E-03
109	GO:0031348: negative regulation of defense response	9.05E-03
110	GO:0010584: pollen exine formation	1.02E-02
111	GO:0006817: phosphate ion transport	1.02E-02
112	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.08E-02
113	GO:0042147: retrograde transport, endosome to Golgi	1.08E-02
114	GO:0070417: cellular response to cold	1.08E-02
115	GO:0042631: cellular response to water deprivation	1.14E-02
116	GO:0000413: protein peptidyl-prolyl isomerization	1.14E-02
117	GO:0009958: positive gravitropism	1.20E-02
118	GO:0006520: cellular amino acid metabolic process	1.20E-02
119	GO:0010197: polar nucleus fusion	1.20E-02
120	GO:0061025: membrane fusion	1.26E-02
121	GO:0010193: response to ozone	1.39E-02
122	GO:0000302: response to reactive oxygen species	1.39E-02
123	GO:0006891: intra-Golgi vesicle-mediated transport	1.39E-02
124	GO:0006635: fatty acid beta-oxidation	1.39E-02
125	GO:0009630: gravitropism	1.46E-02
126	GO:0019760: glucosinolate metabolic process	1.60E-02
127	GO:0001666: response to hypoxia	1.81E-02
128	GO:0042254: ribosome biogenesis	1.93E-02
129	GO:0006906: vesicle fusion	1.96E-02
130	GO:0016049: cell growth	2.11E-02
131	GO:0048767: root hair elongation	2.26E-02
132	GO:0080167: response to karrikin	2.35E-02
133	GO:0010119: regulation of stomatal movement	2.42E-02
134	GO:0044550: secondary metabolite biosynthetic process	2.55E-02
135	GO:0009867: jasmonic acid mediated signaling pathway	2.59E-02
136	GO:0045087: innate immune response	2.59E-02
137	GO:0006099: tricarboxylic acid cycle	2.67E-02
138	GO:0006631: fatty acid metabolic process	2.93E-02
139	GO:0006887: exocytosis	2.93E-02
140	GO:0042542: response to hydrogen peroxide	3.01E-02
141	GO:0006468: protein phosphorylation	3.27E-02
142	GO:0032259: methylation	3.31E-02
143	GO:0006855: drug transmembrane transport	3.46E-02
144	GO:0009846: pollen germination	3.65E-02
145	GO:0009753: response to jasmonic acid	3.71E-02
146	GO:0006813: potassium ion transport	3.83E-02
147	GO:0009620: response to fungus	4.62E-02
148	GO:0009624: response to nematode	4.92E-02

Rank	GO Term	Adjusted P value
1	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
2	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
3	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
4	GO:0008117: sphinganine-1-phosphate aldolase activity	0.00E+00
5	GO:0008061: chitin binding	1.47E-05
6	GO:0004364: glutathione transferase activity	3.00E-05
7	GO:0004656: procollagen-proline 4-dioxygenase activity	5.62E-05
8	GO:0005516: calmodulin binding	5.80E-05
9	GO:0043295: glutathione binding	7.52E-05
10	GO:0005506: iron ion binding	1.24E-04
11	GO:0033984: indole-3-glycerol-phosphate lyase activity	1.42E-04
12	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	1.42E-04
13	GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity	1.42E-04
14	GO:2001147: camalexin binding	1.42E-04
15	GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity	1.42E-04
16	GO:2001227: quercitrin binding	1.42E-04
17	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.96E-04
18	GO:0004568: chitinase activity	2.13E-04
19	GO:0004385: guanylate kinase activity	3.25E-04
20	GO:0004617: phosphoglycerate dehydrogenase activity	3.25E-04
21	GO:0005388: calcium-transporting ATPase activity	3.27E-04
22	GO:0016174: NAD(P)H oxidase activity	5.33E-04
23	GO:0004049: anthranilate synthase activity	5.33E-04
24	GO:0004540: ribonuclease activity	6.19E-04
25	GO:0004449: isocitrate dehydrogenase (NAD+) activity	7.63E-04
26	GO:0004351: glutamate decarboxylase activity	7.63E-04
27	GO:0017089: glycolipid transporter activity	7.63E-04
28	GO:0030551: cyclic nucleotide binding	9.27E-04
29	GO:0004031: aldehyde oxidase activity	1.01E-03
30	GO:0050302: indole-3-acetaldehyde oxidase activity	1.01E-03
31	GO:0004834: tryptophan synthase activity	1.01E-03
32	GO:0051861: glycolipid binding	1.01E-03
33	GO:0010294: abscisic acid glucosyltransferase activity	1.28E-03
34	GO:0019825: oxygen binding	1.33E-03
35	GO:0004029: aldehyde dehydrogenase (NAD) activity	1.57E-03
36	GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity	1.57E-03
37	GO:0030976: thiamine pyrophosphate binding	1.57E-03
38	GO:0102391: decanoate--CoA ligase activity	1.88E-03
39	GO:0004012: phospholipid-translocating ATPase activity	1.88E-03
40	GO:0005242: inward rectifier potassium channel activity	1.88E-03
41	GO:0004467: long-chain fatty acid-CoA ligase activity	2.21E-03
42	GO:0016831: carboxy-lyase activity	2.21E-03
43	GO:0004222: metalloendopeptidase activity	2.50E-03
44	GO:0004033: aldo-keto reductase (NADP) activity	2.56E-03
45	GO:0050897: cobalt ion binding	2.61E-03
46	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.86E-03
47	GO:0003746: translation elongation factor activity	2.86E-03
48	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	3.71E-03
49	GO:0004713: protein tyrosine kinase activity	4.12E-03
50	GO:0008047: enzyme activator activity	4.12E-03
51	GO:0051287: NAD binding	4.45E-03
52	GO:0004129: cytochrome-c oxidase activity	4.55E-03
53	GO:0005543: phospholipid binding	4.55E-03
54	GO:0043565: sequence-specific DNA binding	5.24E-03
55	GO:0000175: 3'-5'-exoribonuclease activity	5.45E-03
56	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	5.45E-03
57	GO:0005262: calcium channel activity	5.45E-03
58	GO:0020037: heme binding	5.49E-03
59	GO:0004175: endopeptidase activity	5.92E-03
60	GO:0004535: poly(A)-specific ribonuclease activity	5.92E-03
61	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	5.92E-03
62	GO:0004190: aspartic-type endopeptidase activity	6.41E-03
63	GO:0030552: cAMP binding	6.41E-03
64	GO:0030553: cGMP binding	6.41E-03
65	GO:0016746: transferase activity, transferring acyl groups	7.24E-03
66	GO:0008134: transcription factor binding	7.42E-03
67	GO:0031418: L-ascorbic acid binding	7.42E-03
68	GO:0003954: NADH dehydrogenase activity	7.42E-03
69	GO:0005216: ion channel activity	7.95E-03
70	GO:0008408: 3'-5' exonuclease activity	8.49E-03
71	GO:0030170: pyridoxal phosphate binding	9.79E-03
72	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.02E-02
73	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.14E-02
74	GO:0005249: voltage-gated potassium channel activity	1.14E-02
75	GO:0008194: UDP-glycosyltransferase activity	1.36E-02
76	GO:0016597: amino acid binding	1.74E-02
77	GO:0008168: methyltransferase activity	1.82E-02
78	GO:0000287: magnesium ion binding	1.86E-02
79	GO:0004683: calmodulin-dependent protein kinase activity	2.03E-02
80	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.11E-02
81	GO:0050660: flavin adenine dinucleotide binding	2.19E-02
82	GO:0015238: drug transmembrane transporter activity	2.26E-02
83	GO:0005507: copper ion binding	2.30E-02
84	GO:0004497: monooxygenase activity	2.35E-02
85	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.42E-02
86	GO:0000149: SNARE binding	2.76E-02
87	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.76E-02
88	GO:0050661: NADP binding	2.84E-02
89	GO:0005484: SNAP receptor activity	3.10E-02
90	GO:0051537: 2 iron, 2 sulfur cluster binding	3.28E-02
91	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.46E-02
92	GO:0044212: transcription regulatory region DNA binding	3.57E-02
93	GO:0009055: electron carrier activity	3.71E-02
94	GO:0004674: protein serine/threonine kinase activity	3.83E-02
95	GO:0016298: lipase activity	3.93E-02
96	GO:0080044: quercetin 7-O-glucosyltransferase activity	4.62E-02
97	GO:0080043: quercetin 3-O-glucosyltransferase activity	4.62E-02
98	GO:0003779: actin binding	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0030014: CCR4-NOT complex	1.42E-04
2	GO:0005829: cytosol	1.54E-04
3	GO:0031304: intrinsic component of mitochondrial inner membrane	3.25E-04
4	GO:0005901: caveola	3.25E-04
5	GO:0005886: plasma membrane	5.01E-04
6	GO:0005853: eukaryotic translation elongation factor 1 complex	5.33E-04
7	GO:0005746: mitochondrial respiratory chain	1.28E-03
8	GO:0005773: vacuole	1.92E-03
9	GO:0005887: integral component of plasma membrane	2.21E-03
10	GO:0031012: extracellular matrix	5.45E-03
11	GO:0016020: membrane	6.04E-03
12	GO:0030176: integral component of endoplasmic reticulum membrane	6.41E-03
13	GO:0031225: anchored component of membrane	6.51E-03
14	GO:0015629: actin cytoskeleton	9.62E-03
15	GO:0005783: endoplasmic reticulum	1.02E-02
16	GO:0005777: peroxisome	1.76E-02
17	GO:0005789: endoplasmic reticulum membrane	1.83E-02
18	GO:0022625: cytosolic large ribosomal subunit	2.47E-02
19	GO:0031902: late endosome membrane	2.93E-02
20	GO:0031201: SNARE complex	2.93E-02
21	GO:0005622: intracellular	3.04E-02
22	GO:0005794: Golgi apparatus	3.19E-02
23	GO:0043231: intracellular membrane-bounded organelle	3.81E-02
24	GO:0016021: integral component of membrane	4.09E-02
25	GO:0012505: endomembrane system	4.82E-02
26	GO:0009706: chloroplast inner membrane	4.92E-02