Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G02390

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
2GO:0042430: indole-containing compound metabolic process0.00E+00
3GO:0002376: immune system process0.00E+00
4GO:0009398: FMN biosynthetic process0.00E+00
5GO:0042362: fat-soluble vitamin biosynthetic process0.00E+00
6GO:0006793: phosphorus metabolic process0.00E+00
7GO:0051238: sequestering of metal ion0.00E+00
8GO:0016036: cellular response to phosphate starvation4.01E-06
9GO:0080024: indolebutyric acid metabolic process1.38E-05
10GO:0030643: cellular phosphate ion homeostasis8.53E-05
11GO:0009617: response to bacterium9.28E-05
12GO:0019375: galactolipid biosynthetic process1.45E-04
13GO:0010204: defense response signaling pathway, resistance gene-independent1.81E-04
14GO:1900424: regulation of defense response to bacterium1.84E-04
15GO:0048508: embryonic meristem development1.84E-04
16GO:0060627: regulation of vesicle-mediated transport1.84E-04
17GO:0015760: glucose-6-phosphate transport1.84E-04
18GO:0080173: male-female gamete recognition during double fertilization1.84E-04
19GO:0010421: hydrogen peroxide-mediated programmed cell death1.84E-04
20GO:0003400: regulation of COPII vesicle coating1.84E-04
21GO:0032491: detection of molecule of fungal origin1.84E-04
22GO:0010200: response to chitin2.60E-04
23GO:0051592: response to calcium ion4.15E-04
24GO:0031648: protein destabilization4.15E-04
25GO:0051262: protein tetramerization4.15E-04
26GO:0019521: D-gluconate metabolic process4.15E-04
27GO:0009915: phloem sucrose loading4.15E-04
28GO:0019374: galactolipid metabolic process4.15E-04
29GO:0002240: response to molecule of oomycetes origin4.15E-04
30GO:0009945: radial axis specification4.15E-04
31GO:0015712: hexose phosphate transport4.15E-04
32GO:0080026: response to indolebutyric acid4.15E-04
33GO:0046475: glycerophospholipid catabolic process4.15E-04
34GO:0097054: L-glutamate biosynthetic process4.15E-04
35GO:0006631: fatty acid metabolic process6.09E-04
36GO:0010351: lithium ion transport6.76E-04
37GO:0009410: response to xenobiotic stimulus6.76E-04
38GO:0015714: phosphoenolpyruvate transport6.76E-04
39GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway6.76E-04
40GO:0034051: negative regulation of plant-type hypersensitive response6.76E-04
41GO:1900140: regulation of seedling development6.76E-04
42GO:0035436: triose phosphate transmembrane transport6.76E-04
43GO:0009636: response to toxic substance7.81E-04
44GO:0046836: glycolipid transport9.65E-04
45GO:0048194: Golgi vesicle budding9.65E-04
46GO:0006537: glutamate biosynthetic process9.65E-04
47GO:0006882: cellular zinc ion homeostasis9.65E-04
48GO:0001676: long-chain fatty acid metabolic process9.65E-04
49GO:0006817: phosphate ion transport1.13E-03
50GO:0010109: regulation of photosynthesis1.28E-03
51GO:0019676: ammonia assimilation cycle1.28E-03
52GO:0060548: negative regulation of cell death1.28E-03
53GO:0045727: positive regulation of translation1.28E-03
54GO:0006536: glutamate metabolic process1.28E-03
55GO:0015713: phosphoglycerate transport1.28E-03
56GO:0015867: ATP transport1.28E-03
57GO:0080167: response to karrikin1.34E-03
58GO:0009620: response to fungus1.35E-03
59GO:0055114: oxidation-reduction process1.55E-03
60GO:0010225: response to UV-C1.63E-03
61GO:0009247: glycolipid biosynthetic process1.63E-03
62GO:0009749: response to glucose1.63E-03
63GO:0030163: protein catabolic process1.98E-03
64GO:0015691: cadmium ion transport2.01E-03
65GO:0015866: ADP transport2.01E-03
66GO:0002238: response to molecule of fungal origin2.01E-03
67GO:0009643: photosynthetic acclimation2.01E-03
68GO:0050665: hydrogen peroxide biosynthetic process2.01E-03
69GO:0009854: oxidative photosynthetic carbon pathway2.41E-03
70GO:0010555: response to mannitol2.41E-03
71GO:2000067: regulation of root morphogenesis2.41E-03
72GO:0015977: carbon fixation2.41E-03
73GO:0009942: longitudinal axis specification2.41E-03
74GO:0010189: vitamin E biosynthetic process2.41E-03
75GO:0050790: regulation of catalytic activity2.83E-03
76GO:0009395: phospholipid catabolic process2.83E-03
77GO:0070370: cellular heat acclimation2.83E-03
78GO:0030026: cellular manganese ion homeostasis2.83E-03
79GO:0050829: defense response to Gram-negative bacterium2.83E-03
80GO:0016311: dephosphorylation3.09E-03
81GO:0009231: riboflavin biosynthetic process3.28E-03
82GO:0009407: toxin catabolic process3.59E-03
83GO:0030968: endoplasmic reticulum unfolded protein response3.75E-03
84GO:0007186: G-protein coupled receptor signaling pathway3.75E-03
85GO:0010262: somatic embryogenesis3.75E-03
86GO:0046685: response to arsenic-containing substance4.25E-03
87GO:0006098: pentose-phosphate shunt4.25E-03
88GO:0009821: alkaloid biosynthetic process4.25E-03
89GO:0006099: tricarboxylic acid cycle4.30E-03
90GO:0009651: response to salt stress4.73E-03
91GO:0042542: response to hydrogen peroxide5.09E-03
92GO:0009744: response to sucrose5.30E-03
93GO:0055062: phosphate ion homeostasis5.30E-03
94GO:0007064: mitotic sister chromatid cohesion5.30E-03
95GO:0006995: cellular response to nitrogen starvation5.30E-03
96GO:0006032: chitin catabolic process5.30E-03
97GO:0007165: signal transduction5.42E-03
98GO:0006816: calcium ion transport5.85E-03
99GO:0000272: polysaccharide catabolic process5.85E-03
100GO:0009750: response to fructose5.85E-03
101GO:0009611: response to wounding6.00E-03
102GO:0031347: regulation of defense response6.41E-03
103GO:0006890: retrograde vesicle-mediated transport, Golgi to ER6.43E-03
104GO:0006790: sulfur compound metabolic process6.43E-03
105GO:0012501: programmed cell death6.43E-03
106GO:0015706: nitrate transport6.43E-03
107GO:0006812: cation transport6.65E-03
108GO:0009266: response to temperature stimulus7.64E-03
109GO:0034605: cellular response to heat7.64E-03
110GO:0002237: response to molecule of bacterial origin7.64E-03
111GO:0007034: vacuolar transport7.64E-03
112GO:0044550: secondary metabolite biosynthetic process7.70E-03
113GO:0046854: phosphatidylinositol phosphorylation8.27E-03
114GO:0042343: indole glucosinolate metabolic process8.27E-03
115GO:0010167: response to nitrate8.27E-03
116GO:0090351: seedling development8.27E-03
117GO:0006071: glycerol metabolic process8.93E-03
118GO:0006636: unsaturated fatty acid biosynthetic process8.93E-03
119GO:0009863: salicylic acid mediated signaling pathway9.60E-03
120GO:0009624: response to nematode1.02E-02
121GO:0006874: cellular calcium ion homeostasis1.03E-02
122GO:0009695: jasmonic acid biosynthetic process1.03E-02
123GO:0098542: defense response to other organism1.10E-02
124GO:0031408: oxylipin biosynthetic process1.10E-02
125GO:0016998: cell wall macromolecule catabolic process1.10E-02
126GO:0006508: proteolysis1.15E-02
127GO:0031348: negative regulation of defense response1.17E-02
128GO:0009814: defense response, incompatible interaction1.17E-02
129GO:0006012: galactose metabolic process1.25E-02
130GO:0010091: trichome branching1.32E-02
131GO:0009306: protein secretion1.32E-02
132GO:0006885: regulation of pH1.56E-02
133GO:0006814: sodium ion transport1.64E-02
134GO:0042742: defense response to bacterium1.69E-02
135GO:0006623: protein targeting to vacuole1.73E-02
136GO:0010183: pollen tube guidance1.73E-02
137GO:0010150: leaf senescence1.76E-02
138GO:0071554: cell wall organization or biogenesis1.81E-02
139GO:0010193: response to ozone1.81E-02
140GO:0006635: fatty acid beta-oxidation1.81E-02
141GO:1901657: glycosyl compound metabolic process1.99E-02
142GO:0006464: cellular protein modification process2.07E-02
143GO:0006904: vesicle docking involved in exocytosis2.17E-02
144GO:0016310: phosphorylation2.23E-02
145GO:0051607: defense response to virus2.26E-02
146GO:0009615: response to virus2.35E-02
147GO:0009816: defense response to bacterium, incompatible interaction2.45E-02
148GO:0042128: nitrate assimilation2.55E-02
149GO:0006888: ER to Golgi vesicle-mediated transport2.64E-02
150GO:0008219: cell death2.84E-02
151GO:0048767: root hair elongation2.94E-02
152GO:0010043: response to zinc ion3.15E-02
153GO:0006839: mitochondrial transport3.69E-02
154GO:0006887: exocytosis3.80E-02
155GO:0015979: photosynthesis3.86E-02
156GO:0045892: negative regulation of transcription, DNA-templated4.11E-02
157GO:0009644: response to high light intensity4.26E-02
158GO:0006855: drug transmembrane transport4.50E-02
159GO:0009846: pollen germination4.73E-02
160GO:0032259: methylation4.77E-02
161GO:0009751: response to salicylic acid4.90E-02
162GO:0009408: response to heat4.97E-02
163GO:0009809: lignin biosynthetic process4.98E-02
164GO:0006813: potassium ion transport4.98E-02
RankGO TermAdjusted P value
1GO:0008531: riboflavin kinase activity0.00E+00
2GO:1990837: sequence-specific double-stranded DNA binding0.00E+00
3GO:0015930: glutamate synthase activity0.00E+00
4GO:0016312: inositol bisphosphate phosphatase activity0.00E+00
5GO:0010176: homogentisate phytyltransferase activity0.00E+00
6GO:0016041: glutamate synthase (ferredoxin) activity1.84E-04
7GO:0090353: polygalacturonase inhibitor activity1.84E-04
8GO:0005090: Sar guanyl-nucleotide exchange factor activity1.84E-04
9GO:0004321: fatty-acyl-CoA synthase activity1.84E-04
10GO:0004103: choline kinase activity4.15E-04
11GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity4.15E-04
12GO:0015152: glucose-6-phosphate transmembrane transporter activity4.15E-04
13GO:0003919: FMN adenylyltransferase activity4.15E-04
14GO:0050736: O-malonyltransferase activity4.15E-04
15GO:0005315: inorganic phosphate transmembrane transporter activity4.70E-04
16GO:0004190: aspartic-type endopeptidase activity5.92E-04
17GO:0071917: triose-phosphate transmembrane transporter activity6.76E-04
18GO:0001664: G-protein coupled receptor binding6.76E-04
19GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity6.76E-04
20GO:0031683: G-protein beta/gamma-subunit complex binding6.76E-04
21GO:0008964: phosphoenolpyruvate carboxylase activity6.76E-04
22GO:0000287: magnesium ion binding9.47E-04
23GO:0004351: glutamate decarboxylase activity9.65E-04
24GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity9.65E-04
25GO:0017089: glycolipid transporter activity9.65E-04
26GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity9.65E-04
27GO:0004108: citrate (Si)-synthase activity9.65E-04
28GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity9.65E-04
29GO:0015120: phosphoglycerate transmembrane transporter activity1.28E-03
30GO:0004659: prenyltransferase activity1.28E-03
31GO:0015368: calcium:cation antiporter activity1.28E-03
32GO:0004737: pyruvate decarboxylase activity1.28E-03
33GO:0051861: glycolipid binding1.28E-03
34GO:0015369: calcium:proton antiporter activity1.28E-03
35GO:0009916: alternative oxidase activity1.28E-03
36GO:0008891: glycolate oxidase activity1.28E-03
37GO:0004301: epoxide hydrolase activity1.28E-03
38GO:0031386: protein tag1.63E-03
39GO:0051538: 3 iron, 4 sulfur cluster binding1.63E-03
40GO:0004197: cysteine-type endopeptidase activity1.85E-03
41GO:0004866: endopeptidase inhibitor activity2.01E-03
42GO:0030976: thiamine pyrophosphate binding2.01E-03
43GO:0051020: GTPase binding2.41E-03
44GO:0015217: ADP transmembrane transporter activity2.41E-03
45GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity2.41E-03
46GO:0102391: decanoate--CoA ligase activity2.41E-03
47GO:0004012: phospholipid-translocating ATPase activity2.41E-03
48GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity2.41E-03
49GO:0003978: UDP-glucose 4-epimerase activity2.41E-03
50GO:0005347: ATP transmembrane transporter activity2.41E-03
51GO:0004467: long-chain fatty acid-CoA ligase activity2.83E-03
52GO:0016831: carboxy-lyase activity2.83E-03
53GO:0015297: antiporter activity2.85E-03
54GO:0004714: transmembrane receptor protein tyrosine kinase activity3.28E-03
55GO:0052747: sinapyl alcohol dehydrogenase activity3.28E-03
56GO:0015491: cation:cation antiporter activity3.28E-03
57GO:0004630: phospholipase D activity3.75E-03
58GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity3.75E-03
59GO:0016207: 4-coumarate-CoA ligase activity4.25E-03
60GO:0008889: glycerophosphodiester phosphodiesterase activity4.25E-03
61GO:0003993: acid phosphatase activity4.30E-03
62GO:0016844: strictosidine synthase activity4.76E-03
63GO:0015112: nitrate transmembrane transporter activity4.76E-03
64GO:0004364: glutathione transferase activity5.09E-03
65GO:0004568: chitinase activity5.30E-03
66GO:0016787: hydrolase activity5.73E-03
67GO:0008794: arsenate reductase (glutaredoxin) activity5.85E-03
68GO:0045551: cinnamyl-alcohol dehydrogenase activity6.43E-03
69GO:0015114: phosphate ion transmembrane transporter activity7.03E-03
70GO:0005388: calcium-transporting ATPase activity7.03E-03
71GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism7.03E-03
72GO:0008061: chitin binding8.27E-03
73GO:0003712: transcription cofactor activity8.27E-03
74GO:0004725: protein tyrosine phosphatase activity8.93E-03
75GO:0004871: signal transducer activity9.24E-03
76GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen9.61E-03
77GO:0004298: threonine-type endopeptidase activity1.10E-02
78GO:0033612: receptor serine/threonine kinase binding1.10E-02
79GO:0022891: substrate-specific transmembrane transporter activity1.25E-02
80GO:0005451: monovalent cation:proton antiporter activity1.48E-02
81GO:0015299: solute:proton antiporter activity1.64E-02
82GO:0010181: FMN binding1.64E-02
83GO:0015385: sodium:proton antiporter activity1.99E-02
84GO:0016791: phosphatase activity2.07E-02
85GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity2.17E-02
86GO:0008237: metallopeptidase activity2.17E-02
87GO:0005515: protein binding2.19E-02
88GO:0042802: identical protein binding2.24E-02
89GO:0016413: O-acetyltransferase activity2.26E-02
90GO:0051213: dioxygenase activity2.35E-02
91GO:0008168: methyltransferase activity2.63E-02
92GO:0102483: scopolin beta-glucosidase activity2.64E-02
93GO:0004806: triglyceride lipase activity2.64E-02
94GO:0004721: phosphoprotein phosphatase activity2.64E-02
95GO:0008757: S-adenosylmethionine-dependent methyltransferase activity2.74E-02
96GO:0005096: GTPase activator activity2.94E-02
97GO:0015238: drug transmembrane transporter activity2.94E-02
98GO:0016301: kinase activity2.96E-02
99GO:0043565: sequence-specific DNA binding3.03E-02
100GO:0030145: manganese ion binding3.15E-02
101GO:0016614: oxidoreductase activity, acting on CH-OH group of donors3.15E-02
102GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors3.36E-02
103GO:0008422: beta-glucosidase activity3.58E-02
104GO:0019825: oxygen binding3.64E-02
105GO:0005516: calmodulin binding3.90E-02
106GO:0035091: phosphatidylinositol binding4.26E-02
107GO:0015293: symporter activity4.38E-02
108GO:0004722: protein serine/threonine phosphatase activity4.43E-02
109GO:0005524: ATP binding4.54E-02
110GO:0046872: metal ion binding4.90E-02
111GO:0003924: GTPase activity4.97E-02
RankGO TermAdjusted P value
1GO:0019822: P4 peroxisome0.00E+00
2GO:0005777: peroxisome7.70E-05
3GO:0005829: cytosol4.30E-04
4GO:0048046: apoplast6.33E-04
5GO:0030139: endocytic vesicle6.76E-04
6GO:0009986: cell surface2.83E-03
7GO:0019773: proteasome core complex, alpha-subunit complex3.75E-03
8GO:0005779: integral component of peroxisomal membrane3.75E-03
9GO:0008541: proteasome regulatory particle, lid subcomplex5.85E-03
10GO:0005618: cell wall6.77E-03
11GO:0000502: proteasome complex7.14E-03
12GO:0005794: Golgi apparatus7.17E-03
13GO:0005764: lysosome7.64E-03
14GO:0030176: integral component of endoplasmic reticulum membrane8.27E-03
15GO:0005834: heterotrimeric G-protein complex9.00E-03
16GO:0070469: respiratory chain1.03E-02
17GO:0005839: proteasome core complex1.10E-02
18GO:0005770: late endosome1.56E-02
19GO:0016021: integral component of membrane1.62E-02
20GO:0000145: exocyst1.90E-02
21GO:0071944: cell periphery1.99E-02
22GO:0005783: endoplasmic reticulum2.24E-02
23GO:0009505: plant-type cell wall2.36E-02
24GO:0009707: chloroplast outer membrane2.84E-02
25GO:0031969: chloroplast membrane3.39E-02
26GO:0005819: spindle3.58E-02
27GO:0031902: late endosome membrane3.80E-02
28GO:0005737: cytoplasm4.02E-02
29GO:0090406: pollen tube4.03E-02
30GO:0005743: mitochondrial inner membrane4.63E-02
31GO:0031966: mitochondrial membrane4.73E-02
Gene type



Gene DE type