co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G80690

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1905499: trichome papilla formation	0.00E+00
2	GO:0007638: mechanosensory behavior	0.00E+00
3	GO:0010430: fatty acid omega-oxidation	0.00E+00
4	GO:0007155: cell adhesion	8.68E-05
5	GO:0071555: cell wall organization	9.86E-05
6	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.00E-04
7	GO:0007267: cell-cell signaling	1.11E-04
8	GO:0019510: S-adenosylhomocysteine catabolic process	1.31E-04
9	GO:0010442: guard cell morphogenesis	1.31E-04
10	GO:0045490: pectin catabolic process	2.38E-04
11	GO:2000123: positive regulation of stomatal complex development	3.03E-04
12	GO:0052541: plant-type cell wall cellulose metabolic process	3.03E-04
13	GO:0033353: S-adenosylmethionine cycle	3.03E-04
14	GO:0006071: glycerol metabolic process	4.19E-04
15	GO:0006065: UDP-glucuronate biosynthetic process	4.99E-04
16	GO:0090506: axillary shoot meristem initiation	4.99E-04
17	GO:0010253: UDP-rhamnose biosynthetic process	4.99E-04
18	GO:0030245: cellulose catabolic process	6.13E-04
19	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	7.14E-04
20	GO:0007231: osmosensory signaling pathway	7.14E-04
21	GO:0042335: cuticle development	8.42E-04
22	GO:0045454: cell redox homeostasis	8.70E-04
23	GO:0009765: photosynthesis, light harvesting	9.47E-04
24	GO:0033500: carbohydrate homeostasis	9.47E-04
25	GO:2000038: regulation of stomatal complex development	9.47E-04
26	GO:0006546: glycine catabolic process	9.47E-04
27	GO:0016123: xanthophyll biosynthetic process	1.20E-03
28	GO:0006665: sphingolipid metabolic process	1.20E-03
29	GO:0010375: stomatal complex patterning	1.20E-03
30	GO:0016120: carotene biosynthetic process	1.20E-03
31	GO:0010405: arabinogalactan protein metabolic process	1.47E-03
32	GO:0018258: protein O-linked glycosylation via hydroxyproline	1.47E-03
33	GO:0030643: cellular phosphate ion homeostasis	1.76E-03
34	GO:0010067: procambium histogenesis	1.76E-03
35	GO:0009094: L-phenylalanine biosynthetic process	1.76E-03
36	GO:0006754: ATP biosynthetic process	3.08E-03
37	GO:0048589: developmental growth	3.08E-03
38	GO:0042761: very long-chain fatty acid biosynthetic process	3.46E-03
39	GO:0010192: mucilage biosynthetic process	3.84E-03
40	GO:0018119: peptidyl-cysteine S-nitrosylation	4.24E-03
41	GO:0006816: calcium ion transport	4.24E-03
42	GO:0009773: photosynthetic electron transport in photosystem I	4.24E-03
43	GO:0006820: anion transport	4.65E-03
44	GO:0050826: response to freezing	5.08E-03
45	GO:0009725: response to hormone	5.08E-03
46	GO:0006869: lipid transport	5.38E-03
47	GO:0010223: secondary shoot formation	5.52E-03
48	GO:0010020: chloroplast fission	5.52E-03
49	GO:0010207: photosystem II assembly	5.52E-03
50	GO:0070588: calcium ion transmembrane transport	5.97E-03
51	GO:0042545: cell wall modification	6.16E-03
52	GO:0006629: lipid metabolic process	6.24E-03
53	GO:0010025: wax biosynthetic process	6.43E-03
54	GO:0007010: cytoskeleton organization	6.91E-03
55	GO:0010026: trichome differentiation	7.40E-03
56	GO:0016998: cell wall macromolecule catabolic process	7.91E-03
57	GO:0048278: vesicle docking	7.91E-03
58	GO:0080092: regulation of pollen tube growth	8.42E-03
59	GO:0006730: one-carbon metabolic process	8.42E-03
60	GO:0001944: vasculature development	8.95E-03
61	GO:0009294: DNA mediated transformation	8.95E-03
62	GO:0010089: xylem development	9.49E-03
63	GO:0010214: seed coat development	9.49E-03
64	GO:0019722: calcium-mediated signaling	9.49E-03
65	GO:0010091: trichome branching	9.49E-03
66	GO:0016117: carotenoid biosynthetic process	1.00E-02
67	GO:0000413: protein peptidyl-prolyl isomerization	1.06E-02
68	GO:0010087: phloem or xylem histogenesis	1.06E-02
69	GO:0000271: polysaccharide biosynthetic process	1.06E-02
70	GO:0045489: pectin biosynthetic process	1.12E-02
71	GO:0061025: membrane fusion	1.18E-02
72	GO:0071554: cell wall organization or biogenesis	1.30E-02
73	GO:0007264: small GTPase mediated signal transduction	1.36E-02
74	GO:0010583: response to cyclopentenone	1.36E-02
75	GO:1901657: glycosyl compound metabolic process	1.42E-02
76	GO:0009658: chloroplast organization	1.71E-02
77	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.75E-02
78	GO:0006906: vesicle fusion	1.82E-02
79	GO:0055114: oxidation-reduction process	1.83E-02
80	GO:0010411: xyloglucan metabolic process	1.89E-02
81	GO:0009817: defense response to fungus, incompatible interaction	2.03E-02
82	GO:0048767: root hair elongation	2.11E-02
83	GO:0000160: phosphorelay signal transduction system	2.11E-02
84	GO:0009813: flavonoid biosynthetic process	2.11E-02
85	GO:0009834: plant-type secondary cell wall biogenesis	2.18E-02
86	GO:0009407: toxin catabolic process	2.18E-02
87	GO:0016051: carbohydrate biosynthetic process	2.41E-02
88	GO:0006839: mitochondrial transport	2.64E-02
89	GO:0006468: protein phosphorylation	2.70E-02
90	GO:0006887: exocytosis	2.72E-02
91	GO:0006631: fatty acid metabolic process	2.72E-02
92	GO:0009744: response to sucrose	2.88E-02
93	GO:0051707: response to other organism	2.88E-02
94	GO:0042546: cell wall biogenesis	2.96E-02
95	GO:0009636: response to toxic substance	3.13E-02
96	GO:0009736: cytokinin-activated signaling pathway	3.56E-02
97	GO:0051603: proteolysis involved in cellular protein catabolic process	3.65E-02
98	GO:0048367: shoot system development	4.11E-02
99	GO:0009553: embryo sac development	4.48E-02
100	GO:0018105: peptidyl-serine phosphorylation	4.67E-02
101	GO:0009742: brassinosteroid mediated signaling pathway	4.77E-02

Rank	GO Term	Adjusted P value
1	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
2	GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity	0.00E+00
3	GO:0051920: peroxiredoxin activity	4.03E-07
4	GO:0016209: antioxidant activity	1.02E-06
5	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	1.31E-04
6	GO:0010489: UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity	1.31E-04
7	GO:0004560: alpha-L-fucosidase activity	1.31E-04
8	GO:0004013: adenosylhomocysteinase activity	1.31E-04
9	GO:0010490: UDP-4-keto-rhamnose-4-keto-reductase activity	1.31E-04
10	GO:0008889: glycerophosphodiester phosphodiesterase activity	1.34E-04
11	GO:0008460: dTDP-glucose 4,6-dehydratase activity	3.03E-04
12	GO:0004047: aminomethyltransferase activity	3.03E-04
13	GO:0010280: UDP-L-rhamnose synthase activity	3.03E-04
14	GO:0046593: mandelonitrile lyase activity	3.03E-04
15	GO:0050377: UDP-glucose 4,6-dehydratase activity	3.03E-04
16	GO:0003979: UDP-glucose 6-dehydrogenase activity	4.99E-04
17	GO:0004148: dihydrolipoyl dehydrogenase activity	4.99E-04
18	GO:0005504: fatty acid binding	4.99E-04
19	GO:0030570: pectate lyase activity	6.66E-04
20	GO:0008810: cellulase activity	6.66E-04
21	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	7.14E-04
22	GO:0030599: pectinesterase activity	7.87E-04
23	GO:0004659: prenyltransferase activity	9.47E-04
24	GO:0047769: arogenate dehydratase activity	9.47E-04
25	GO:0004664: prephenate dehydratase activity	9.47E-04
26	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	9.47E-04
27	GO:0045430: chalcone isomerase activity	9.47E-04
28	GO:0008381: mechanically-gated ion channel activity	1.20E-03
29	GO:0009922: fatty acid elongase activity	1.20E-03
30	GO:1990714: hydroxyproline O-galactosyltransferase activity	1.47E-03
31	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	1.76E-03
32	GO:0016832: aldehyde-lyase activity	1.76E-03
33	GO:0051753: mannan synthase activity	1.76E-03
34	GO:0004601: peroxidase activity	2.90E-03
35	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	3.08E-03
36	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	3.08E-03
37	GO:0051287: NAD binding	4.02E-03
38	GO:0004672: protein kinase activity	4.04E-03
39	GO:0047372: acylglycerol lipase activity	4.24E-03
40	GO:0005089: Rho guanyl-nucleotide exchange factor activity	4.24E-03
41	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.32E-03
42	GO:0045330: aspartyl esterase activity	4.95E-03
43	GO:0005262: calcium channel activity	5.08E-03
44	GO:0004565: beta-galactosidase activity	5.08E-03
45	GO:0005516: calmodulin binding	5.27E-03
46	GO:0045735: nutrient reservoir activity	5.28E-03
47	GO:0009055: electron carrier activity	6.82E-03
48	GO:0004857: enzyme inhibitor activity	6.91E-03
49	GO:0016758: transferase activity, transferring hexosyl groups	7.74E-03
50	GO:0033612: receptor serine/threonine kinase binding	7.91E-03
51	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	8.42E-03
52	GO:0008289: lipid binding	9.50E-03
53	GO:0005102: receptor binding	1.00E-02
54	GO:0019901: protein kinase binding	1.24E-02
55	GO:0004872: receptor activity	1.24E-02
56	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.30E-02
57	GO:0048038: quinone binding	1.30E-02
58	GO:0000156: phosphorelay response regulator activity	1.42E-02
59	GO:0016759: cellulose synthase activity	1.49E-02
60	GO:0008483: transaminase activity	1.55E-02
61	GO:0016722: oxidoreductase activity, oxidizing metal ions	1.55E-02
62	GO:0005200: structural constituent of cytoskeleton	1.55E-02
63	GO:0016413: O-acetyltransferase activity	1.62E-02
64	GO:0016597: amino acid binding	1.62E-02
65	GO:0016757: transferase activity, transferring glycosyl groups	1.73E-02
66	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.82E-02
67	GO:0004683: calmodulin-dependent protein kinase activity	1.89E-02
68	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.89E-02
69	GO:0102483: scopolin beta-glucosidase activity	1.89E-02
70	GO:0050660: flavin adenine dinucleotide binding	1.97E-02
71	GO:0030145: manganese ion binding	2.25E-02
72	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.25E-02
73	GO:0050897: cobalt ion binding	2.25E-02
74	GO:0003746: translation elongation factor activity	2.41E-02
75	GO:0000149: SNARE binding	2.56E-02
76	GO:0008422: beta-glucosidase activity	2.56E-02
77	GO:0004364: glutathione transferase activity	2.80E-02
78	GO:0004185: serine-type carboxypeptidase activity	2.88E-02
79	GO:0005484: SNAP receptor activity	2.88E-02
80	GO:0051537: 2 iron, 2 sulfur cluster binding	3.05E-02
81	GO:0003924: GTPase activity	3.12E-02
82	GO:0005198: structural molecule activity	3.13E-02
83	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.22E-02
84	GO:0004674: protein serine/threonine kinase activity	3.23E-02
85	GO:0003824: catalytic activity	3.53E-02
86	GO:0004650: polygalacturonase activity	4.29E-02

Rank	GO Term	Adjusted P value
1	GO:0048046: apoplast	8.78E-12
2	GO:0031225: anchored component of membrane	2.67E-09
3	GO:0046658: anchored component of plasma membrane	5.62E-09
4	GO:0009505: plant-type cell wall	3.30E-08
5	GO:0005576: extracellular region	1.75E-06
6	GO:0005886: plasma membrane	6.26E-06
7	GO:0009534: chloroplast thylakoid	2.26E-05
8	GO:0009923: fatty acid elongase complex	1.31E-04
9	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	1.34E-04
10	GO:0009543: chloroplast thylakoid lumen	1.37E-04
11	GO:0031977: thylakoid lumen	3.34E-04
12	GO:0005853: eukaryotic translation elongation factor 1 complex	4.99E-04
13	GO:0009535: chloroplast thylakoid membrane	6.92E-04
14	GO:0005618: cell wall	7.48E-04
15	GO:0009507: chloroplast	8.03E-04
16	GO:0000139: Golgi membrane	9.08E-04
17	GO:0009941: chloroplast envelope	1.12E-03
18	GO:0009533: chloroplast stromal thylakoid	2.06E-03
19	GO:0009579: thylakoid	3.72E-03
20	GO:0016324: apical plasma membrane	3.84E-03
21	GO:0005794: Golgi apparatus	4.43E-03
22	GO:0009506: plasmodesma	5.06E-03
23	GO:0005875: microtubule associated complex	6.43E-03
24	GO:0009570: chloroplast stroma	7.15E-03
25	GO:0042651: thylakoid membrane	7.40E-03
26	GO:0009532: plastid stroma	7.91E-03
27	GO:0005615: extracellular space	1.23E-02
28	GO:0009504: cell plate	1.24E-02
29	GO:0016021: integral component of membrane	1.53E-02
30	GO:0010319: stromule	1.55E-02
31	GO:0005802: trans-Golgi network	2.35E-02
32	GO:0031201: SNARE complex	2.72E-02
33	GO:0005768: endosome	2.76E-02
34	GO:0005856: cytoskeleton	3.13E-02
35	GO:0016020: membrane	3.72E-02
36	GO:0005747: mitochondrial respiratory chain complex I	4.11E-02
37	GO:0012505: endomembrane system	4.48E-02
38	GO:0009706: chloroplast inner membrane	4.58E-02