co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G79600

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009661: chromoplast organization	0.00E+00
2	GO:1903508: positive regulation of nucleic acid-templated transcription	0.00E+00
3	GO:1901401: regulation of tetrapyrrole metabolic process	0.00E+00
4	GO:0015970: guanosine tetraphosphate biosynthetic process	0.00E+00
5	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
6	GO:0046677: response to antibiotic	0.00E+00
7	GO:0015995: chlorophyll biosynthetic process	5.85E-05
8	GO:0010206: photosystem II repair	6.04E-05
9	GO:0007623: circadian rhythm	6.74E-05
10	GO:0018002: N-terminal peptidyl-glutamic acid acetylation	7.75E-05
11	GO:0006475: internal protein amino acid acetylation	7.75E-05
12	GO:0006474: N-terminal protein amino acid acetylation	7.75E-05
13	GO:0017198: N-terminal peptidyl-serine acetylation	7.75E-05
14	GO:0048438: floral whorl development	7.75E-05
15	GO:0000305: response to oxygen radical	7.75E-05
16	GO:0010114: response to red light	1.41E-04
17	GO:0009640: photomorphogenesis	1.41E-04
18	GO:0009266: response to temperature stimulus	1.60E-04
19	GO:0000256: allantoin catabolic process	1.85E-04
20	GO:0050992: dimethylallyl diphosphate biosynthetic process	1.85E-04
21	GO:1904143: positive regulation of carotenoid biosynthetic process	1.85E-04
22	GO:0009915: phloem sucrose loading	1.85E-04
23	GO:0042548: regulation of photosynthesis, light reaction	1.85E-04
24	GO:0010017: red or far-red light signaling pathway	3.05E-04
25	GO:0010136: ureide catabolic process	3.11E-04
26	GO:0005977: glycogen metabolic process	3.11E-04
27	GO:0048575: short-day photoperiodism, flowering	3.11E-04
28	GO:0055114: oxidation-reduction process	3.35E-04
29	GO:0006145: purine nucleobase catabolic process	4.49E-04
30	GO:0010021: amylopectin biosynthetic process	5.98E-04
31	GO:2000306: positive regulation of photomorphogenesis	5.98E-04
32	GO:0006749: glutathione metabolic process	5.98E-04
33	GO:0016123: xanthophyll biosynthetic process	7.57E-04
34	GO:0016120: carotene biosynthetic process	7.57E-04
35	GO:0006655: phosphatidylglycerol biosynthetic process	9.24E-04
36	GO:0009643: photosynthetic acclimation	9.24E-04
37	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	9.24E-04
38	GO:0045962: positive regulation of development, heterochronic	9.24E-04
39	GO:0010076: maintenance of floral meristem identity	1.10E-03
40	GO:0010189: vitamin E biosynthetic process	1.10E-03
41	GO:0009910: negative regulation of flower development	1.18E-03
42	GO:0051510: regulation of unidimensional cell growth	1.29E-03
43	GO:0009637: response to blue light	1.29E-03
44	GO:0080186: developmental vegetative growth	1.29E-03
45	GO:0009723: response to ethylene	1.41E-03
46	GO:0050821: protein stabilization	1.48E-03
47	GO:0009642: response to light intensity	1.48E-03
48	GO:0010100: negative regulation of photomorphogenesis	1.69E-03
49	GO:0009657: plastid organization	1.69E-03
50	GO:0015979: photosynthesis	1.82E-03
51	GO:0048507: meristem development	1.91E-03
52	GO:0008356: asymmetric cell division	2.14E-03
53	GO:0009688: abscisic acid biosynthetic process	2.37E-03
54	GO:0043085: positive regulation of catalytic activity	2.61E-03
55	GO:0030148: sphingolipid biosynthetic process	2.61E-03
56	GO:0015770: sucrose transport	2.61E-03
57	GO:0016925: protein sumoylation	2.86E-03
58	GO:0016024: CDP-diacylglycerol biosynthetic process	2.86E-03
59	GO:0010582: floral meristem determinacy	2.86E-03
60	GO:2000028: regulation of photoperiodism, flowering	3.12E-03
61	GO:0018107: peptidyl-threonine phosphorylation	3.12E-03
62	GO:0009887: animal organ morphogenesis	3.38E-03
63	GO:0005985: sucrose metabolic process	3.66E-03
64	GO:0006508: proteolysis	4.13E-03
65	GO:0070417: cellular response to cold	6.10E-03
66	GO:0006662: glycerol ether metabolic process	6.78E-03
67	GO:0010182: sugar mediated signaling pathway	6.78E-03
68	GO:0009741: response to brassinosteroid	6.78E-03
69	GO:0010305: leaf vascular tissue pattern formation	6.78E-03
70	GO:0019252: starch biosynthetic process	7.49E-03
71	GO:0008654: phospholipid biosynthetic process	7.49E-03
72	GO:0009791: post-embryonic development	7.49E-03
73	GO:0009658: chloroplast organization	8.30E-03
74	GO:0030163: protein catabolic process	8.59E-03
75	GO:0048366: leaf development	9.78E-03
76	GO:0044550: secondary metabolite biosynthetic process	1.12E-02
77	GO:0016311: dephosphorylation	1.18E-02
78	GO:0045454: cell redox homeostasis	1.23E-02
79	GO:0045892: negative regulation of transcription, DNA-templated	1.25E-02
80	GO:0000160: phosphorelay signal transduction system	1.27E-02
81	GO:0006351: transcription, DNA-templated	1.27E-02
82	GO:0010311: lateral root formation	1.27E-02
83	GO:0010218: response to far red light	1.31E-02
84	GO:0048527: lateral root development	1.36E-02
85	GO:0007568: aging	1.36E-02
86	GO:0006865: amino acid transport	1.40E-02
87	GO:0034599: cellular response to oxidative stress	1.49E-02
88	GO:0006629: lipid metabolic process	1.52E-02
89	GO:0048364: root development	1.59E-02
90	GO:0006631: fatty acid metabolic process	1.64E-02
91	GO:0009965: leaf morphogenesis	1.88E-02
92	GO:0000165: MAPK cascade	1.98E-02
93	GO:0009585: red, far-red light phototransduction	2.14E-02
94	GO:0009909: regulation of flower development	2.30E-02
95	GO:0006417: regulation of translation	2.30E-02
96	GO:0009624: response to nematode	2.75E-02
97	GO:0018105: peptidyl-serine phosphorylation	2.81E-02
98	GO:0006396: RNA processing	2.81E-02
99	GO:0009742: brassinosteroid mediated signaling pathway	2.87E-02
100	GO:0009790: embryo development	3.61E-02
101	GO:0006355: regulation of transcription, DNA-templated	3.61E-02
102	GO:0010150: leaf senescence	4.06E-02
103	GO:0010228: vegetative to reproductive phase transition of meristem	4.19E-02

Rank	GO Term	Adjusted P value
1	GO:0045550: geranylgeranyl reductase activity	0.00E+00
2	GO:0051745: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity	0.00E+00
3	GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity	0.00E+00
4	GO:0009540: zeaxanthin epoxidase [overall] activity	0.00E+00
5	GO:0004462: lactoylglutathione lyase activity	1.48E-05
6	GO:0052631: sphingolipid delta-8 desaturase activity	7.75E-05
7	GO:0046429: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity	7.75E-05
8	GO:1990189: peptide-serine-N-acetyltransferase activity	7.75E-05
9	GO:1990190: peptide-glutamate-N-acetyltransferase activity	7.75E-05
10	GO:0019172: glyoxalase III activity	1.85E-04
11	GO:0019156: isoamylase activity	1.85E-04
12	GO:0008728: GTP diphosphokinase activity	1.85E-04
13	GO:0004362: glutathione-disulfide reductase activity	1.85E-04
14	GO:0000900: translation repressor activity, nucleic acid binding	3.11E-04
15	GO:0016805: dipeptidase activity	3.11E-04
16	GO:0004180: carboxypeptidase activity	3.11E-04
17	GO:0010277: chlorophyllide a oxygenase [overall] activity	3.11E-04
18	GO:0004848: ureidoglycolate hydrolase activity	3.11E-04
19	GO:0016874: ligase activity	3.17E-04
20	GO:0019789: SUMO transferase activity	4.49E-04
21	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	4.49E-04
22	GO:0051538: 3 iron, 4 sulfur cluster binding	7.57E-04
23	GO:0004556: alpha-amylase activity	9.24E-04
24	GO:0004605: phosphatidate cytidylyltransferase activity	9.24E-04
25	GO:0008506: sucrose:proton symporter activity	1.29E-03
26	GO:0071949: FAD binding	1.91E-03
27	GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity	2.37E-03
28	GO:0008047: enzyme activator activity	2.37E-03
29	GO:0008515: sucrose transmembrane transporter activity	2.61E-03
30	GO:0004022: alcohol dehydrogenase (NAD) activity	3.12E-03
31	GO:0004190: aspartic-type endopeptidase activity	3.66E-03
32	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.00E-03
33	GO:0004176: ATP-dependent peptidase activity	4.82E-03
34	GO:0004672: protein kinase activity	4.95E-03
35	GO:0003727: single-stranded RNA binding	5.77E-03
36	GO:0047134: protein-disulfide reductase activity	6.10E-03
37	GO:0008080: N-acetyltransferase activity	6.78E-03
38	GO:0004791: thioredoxin-disulfide reductase activity	7.13E-03
39	GO:0000156: phosphorelay response regulator activity	8.59E-03
40	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	8.59E-03
41	GO:0008237: metallopeptidase activity	9.36E-03
42	GO:0004674: protein serine/threonine kinase activity	9.39E-03
43	GO:0008233: peptidase activity	1.01E-02
44	GO:0008236: serine-type peptidase activity	1.18E-02
45	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.19E-02
46	GO:0005506: iron ion binding	1.25E-02
47	GO:0004871: signal transducer activity	1.29E-02
48	GO:0003993: acid phosphatase activity	1.49E-02
49	GO:0050661: NADP binding	1.59E-02
50	GO:0003677: DNA binding	1.78E-02
51	GO:0051537: 2 iron, 2 sulfur cluster binding	1.83E-02
52	GO:0043621: protein self-association	1.83E-02
53	GO:0016298: lipase activity	2.19E-02
54	GO:0015171: amino acid transmembrane transporter activity	2.30E-02
55	GO:0046872: metal ion binding	2.41E-02
56	GO:0015035: protein disulfide oxidoreductase activity	2.81E-02
57	GO:0016746: transferase activity, transferring acyl groups	2.81E-02
58	GO:0016829: lyase activity	3.42E-02
59	GO:0004252: serine-type endopeptidase activity	3.48E-02
60	GO:0005524: ATP binding	3.52E-02
61	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	3.54E-02
62	GO:0005515: protein binding	3.64E-02
63	GO:0015144: carbohydrate transmembrane transporter activity	3.67E-02
64	GO:0005351: sugar:proton symporter activity	3.99E-02
65	GO:0042802: identical protein binding	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0010368: chloroplast isoamylase complex	0.00E+00
2	GO:0009507: chloroplast	6.16E-05
3	GO:0009535: chloroplast thylakoid membrane	1.20E-04
4	GO:0031415: NatA complex	1.85E-04
5	GO:0031969: chloroplast membrane	2.13E-04
6	GO:0009534: chloroplast thylakoid	2.24E-04
7	GO:0042651: thylakoid membrane	2.52E-04
8	GO:0016605: PML body	3.11E-04
9	GO:0009570: chloroplast stroma	4.22E-04
10	GO:0030660: Golgi-associated vesicle membrane	5.98E-04
11	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	5.98E-04
12	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	1.48E-03
13	GO:0031977: thylakoid lumen	1.52E-03
14	GO:0016604: nuclear body	2.14E-03
15	GO:0009941: chloroplast envelope	2.51E-03
16	GO:0005765: lysosomal membrane	2.61E-03
17	GO:0009706: chloroplast inner membrane	3.12E-03
18	GO:0009543: chloroplast thylakoid lumen	3.90E-03
19	GO:0005789: endoplasmic reticulum membrane	2.17E-02
20	GO:0016607: nuclear speck	2.47E-02
21	GO:0010008: endosome membrane	2.47E-02
22	GO:0005834: heterotrimeric G-protein complex	2.52E-02
23	GO:0009579: thylakoid	3.24E-02
24	GO:0005623: cell	3.29E-02
25	GO:0016021: integral component of membrane	4.49E-02
26	GO:0005768: endosome	4.91E-02