GO Enrichment Analysis of Co-expressed Genes with
AT1G79450
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1900151: regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | 0.00E+00 |
| 2 | GO:0010477: response to sulfur dioxide | 0.00E+00 |
| 3 | GO:0046109: uridine biosynthetic process | 0.00E+00 |
| 4 | GO:0046686: response to cadmium ion | 4.43E-06 |
| 5 | GO:0035266: meristem growth | 4.45E-05 |
| 6 | GO:0007292: female gamete generation | 4.45E-05 |
| 7 | GO:1990641: response to iron ion starvation | 4.45E-05 |
| 8 | GO:0060211: regulation of nuclear-transcribed mRNA poly(A) tail shortening | 4.45E-05 |
| 9 | GO:0051775: response to redox state | 4.45E-05 |
| 10 | GO:0006790: sulfur compound metabolic process | 5.40E-05 |
| 11 | GO:0046777: protein autophosphorylation | 6.64E-05 |
| 12 | GO:0006096: glycolytic process | 9.75E-05 |
| 13 | GO:0019374: galactolipid metabolic process | 1.10E-04 |
| 14 | GO:0051788: response to misfolded protein | 1.10E-04 |
| 15 | GO:0060919: auxin influx | 1.10E-04 |
| 16 | GO:0006101: citrate metabolic process | 1.10E-04 |
| 17 | GO:0010359: regulation of anion channel activity | 1.89E-04 |
| 18 | GO:0060968: regulation of gene silencing | 1.89E-04 |
| 19 | GO:0000302: response to reactive oxygen species | 2.76E-04 |
| 20 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 2.78E-04 |
| 21 | GO:0006542: glutamine biosynthetic process | 3.73E-04 |
| 22 | GO:0015994: chlorophyll metabolic process | 3.73E-04 |
| 23 | GO:0042128: nitrate assimilation | 4.45E-04 |
| 24 | GO:0006097: glyoxylate cycle | 4.75E-04 |
| 25 | GO:0006499: N-terminal protein myristoylation | 5.68E-04 |
| 26 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 5.82E-04 |
| 27 | GO:0048827: phyllome development | 5.82E-04 |
| 28 | GO:0048232: male gamete generation | 5.82E-04 |
| 29 | GO:0043248: proteasome assembly | 5.82E-04 |
| 30 | GO:0010315: auxin efflux | 5.82E-04 |
| 31 | GO:1902456: regulation of stomatal opening | 5.82E-04 |
| 32 | GO:1900425: negative regulation of defense response to bacterium | 5.82E-04 |
| 33 | GO:0098655: cation transmembrane transport | 6.94E-04 |
| 34 | GO:0010078: maintenance of root meristem identity | 9.32E-04 |
| 35 | GO:0006102: isocitrate metabolic process | 9.32E-04 |
| 36 | GO:0006644: phospholipid metabolic process | 9.32E-04 |
| 37 | GO:0016042: lipid catabolic process | 9.79E-04 |
| 38 | GO:0009408: response to heat | 1.01E-03 |
| 39 | GO:0006002: fructose 6-phosphate metabolic process | 1.06E-03 |
| 40 | GO:0090333: regulation of stomatal closure | 1.19E-03 |
| 41 | GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | 1.19E-03 |
| 42 | GO:0071577: zinc II ion transmembrane transport | 1.32E-03 |
| 43 | GO:0048829: root cap development | 1.47E-03 |
| 44 | GO:0006468: protein phosphorylation | 1.54E-03 |
| 45 | GO:0018105: peptidyl-serine phosphorylation | 1.58E-03 |
| 46 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.61E-03 |
| 47 | GO:0010015: root morphogenesis | 1.61E-03 |
| 48 | GO:0006094: gluconeogenesis | 1.92E-03 |
| 49 | GO:0006446: regulation of translational initiation | 2.09E-03 |
| 50 | GO:0010540: basipetal auxin transport | 2.09E-03 |
| 51 | GO:0009933: meristem structural organization | 2.09E-03 |
| 52 | GO:0090351: seedling development | 2.25E-03 |
| 53 | GO:0046854: phosphatidylinositol phosphorylation | 2.25E-03 |
| 54 | GO:0010053: root epidermal cell differentiation | 2.25E-03 |
| 55 | GO:0009225: nucleotide-sugar metabolic process | 2.25E-03 |
| 56 | GO:0006874: cellular calcium ion homeostasis | 2.77E-03 |
| 57 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 2.94E-03 |
| 58 | GO:0030433: ubiquitin-dependent ERAD pathway | 3.14E-03 |
| 59 | GO:0051028: mRNA transport | 3.73E-03 |
| 60 | GO:0010154: fruit development | 4.14E-03 |
| 61 | GO:0002229: defense response to oomycetes | 4.77E-03 |
| 62 | GO:0009630: gravitropism | 4.99E-03 |
| 63 | GO:0007264: small GTPase mediated signal transduction | 4.99E-03 |
| 64 | GO:0016032: viral process | 4.99E-03 |
| 65 | GO:0016311: dephosphorylation | 7.14E-03 |
| 66 | GO:0030244: cellulose biosynthetic process | 7.39E-03 |
| 67 | GO:0048767: root hair elongation | 7.65E-03 |
| 68 | GO:0009813: flavonoid biosynthetic process | 7.65E-03 |
| 69 | GO:0010311: lateral root formation | 7.65E-03 |
| 70 | GO:0010119: regulation of stomatal movement | 8.18E-03 |
| 71 | GO:0045087: innate immune response | 8.71E-03 |
| 72 | GO:0006099: tricarboxylic acid cycle | 8.99E-03 |
| 73 | GO:0042542: response to hydrogen peroxide | 1.01E-02 |
| 74 | GO:0009926: auxin polar transport | 1.04E-02 |
| 75 | GO:0009744: response to sucrose | 1.04E-02 |
| 76 | GO:0051707: response to other organism | 1.04E-02 |
| 77 | GO:0009965: leaf morphogenesis | 1.13E-02 |
| 78 | GO:0009735: response to cytokinin | 1.20E-02 |
| 79 | GO:0006812: cation transport | 1.22E-02 |
| 80 | GO:0009809: lignin biosynthetic process | 1.28E-02 |
| 81 | GO:0009737: response to abscisic acid | 1.32E-02 |
| 82 | GO:0035556: intracellular signal transduction | 1.39E-02 |
| 83 | GO:0048367: shoot system development | 1.48E-02 |
| 84 | GO:0048316: seed development | 1.48E-02 |
| 85 | GO:0006396: RNA processing | 1.68E-02 |
| 86 | GO:0009742: brassinosteroid mediated signaling pathway | 1.72E-02 |
| 87 | GO:0042744: hydrogen peroxide catabolic process | 2.12E-02 |
| 88 | GO:0055114: oxidation-reduction process | 2.25E-02 |
| 89 | GO:0006413: translational initiation | 2.31E-02 |
| 90 | GO:0040008: regulation of growth | 2.35E-02 |
| 91 | GO:0042742: defense response to bacterium | 2.66E-02 |
| 92 | GO:0007166: cell surface receptor signaling pathway | 2.68E-02 |
| 93 | GO:0006979: response to oxidative stress | 2.68E-02 |
| 94 | GO:0080167: response to karrikin | 3.87E-02 |
| 95 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.96E-02 |
| 96 | GO:0010200: response to chitin | 3.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016312: inositol bisphosphate phosphatase activity | 0.00E+00 |
| 2 | GO:0008482: sulfite oxidase activity | 0.00E+00 |
| 3 | GO:0004674: protein serine/threonine kinase activity | 2.22E-06 |
| 4 | GO:0005524: ATP binding | 3.44E-06 |
| 5 | GO:0045309: protein phosphorylated amino acid binding | 3.18E-05 |
| 6 | GO:0016301: kinase activity | 3.70E-05 |
| 7 | GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity | 4.45E-05 |
| 8 | GO:0019904: protein domain specific binding | 4.59E-05 |
| 9 | GO:0015036: disulfide oxidoreductase activity | 1.10E-04 |
| 10 | GO:0003994: aconitate hydratase activity | 1.10E-04 |
| 11 | GO:0004751: ribose-5-phosphate isomerase activity | 1.89E-04 |
| 12 | GO:0016805: dipeptidase activity | 1.89E-04 |
| 13 | GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity | 1.89E-04 |
| 14 | GO:0016656: monodehydroascorbate reductase (NADH) activity | 2.78E-04 |
| 15 | GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 2.78E-04 |
| 16 | GO:0050378: UDP-glucuronate 4-epimerase activity | 3.73E-04 |
| 17 | GO:0010328: auxin influx transmembrane transporter activity | 3.73E-04 |
| 18 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 4.45E-04 |
| 19 | GO:0004683: calmodulin-dependent protein kinase activity | 4.68E-04 |
| 20 | GO:0005496: steroid binding | 4.75E-04 |
| 21 | GO:0004356: glutamate-ammonia ligase activity | 4.75E-04 |
| 22 | GO:0030151: molybdenum ion binding | 4.75E-04 |
| 23 | GO:0045431: flavonol synthase activity | 4.75E-04 |
| 24 | GO:0036402: proteasome-activating ATPase activity | 5.82E-04 |
| 25 | GO:0004526: ribonuclease P activity | 5.82E-04 |
| 26 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 6.94E-04 |
| 27 | GO:0004620: phospholipase activity | 8.11E-04 |
| 28 | GO:0008235: metalloexopeptidase activity | 8.11E-04 |
| 29 | GO:0003872: 6-phosphofructokinase activity | 8.11E-04 |
| 30 | GO:0004714: transmembrane receptor protein tyrosine kinase activity | 9.32E-04 |
| 31 | GO:0052747: sinapyl alcohol dehydrogenase activity | 9.32E-04 |
| 32 | GO:0047617: acyl-CoA hydrolase activity | 1.32E-03 |
| 33 | GO:0030955: potassium ion binding | 1.32E-03 |
| 34 | GO:0004743: pyruvate kinase activity | 1.32E-03 |
| 35 | GO:0016491: oxidoreductase activity | 1.38E-03 |
| 36 | GO:0004177: aminopeptidase activity | 1.61E-03 |
| 37 | GO:0008559: xenobiotic-transporting ATPase activity | 1.61E-03 |
| 38 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 1.77E-03 |
| 39 | GO:0010329: auxin efflux transmembrane transporter activity | 1.92E-03 |
| 40 | GO:0004970: ionotropic glutamate receptor activity | 2.25E-03 |
| 41 | GO:0005217: intracellular ligand-gated ion channel activity | 2.25E-03 |
| 42 | GO:0017025: TBP-class protein binding | 2.25E-03 |
| 43 | GO:0005385: zinc ion transmembrane transporter activity | 2.60E-03 |
| 44 | GO:0008324: cation transmembrane transporter activity | 2.77E-03 |
| 45 | GO:0005507: copper ion binding | 3.24E-03 |
| 46 | GO:0046873: metal ion transmembrane transporter activity | 4.14E-03 |
| 47 | GO:0050662: coenzyme binding | 4.35E-03 |
| 48 | GO:0005509: calcium ion binding | 4.56E-03 |
| 49 | GO:0030247: polysaccharide binding | 6.89E-03 |
| 50 | GO:0004004: ATP-dependent RNA helicase activity | 6.89E-03 |
| 51 | GO:0030145: manganese ion binding | 8.18E-03 |
| 52 | GO:0050661: NADP binding | 9.55E-03 |
| 53 | GO:0051539: 4 iron, 4 sulfur cluster binding | 9.55E-03 |
| 54 | GO:0051287: NAD binding | 1.19E-02 |
| 55 | GO:0016298: lipase activity | 1.32E-02 |
| 56 | GO:0045735: nutrient reservoir activity | 1.45E-02 |
| 57 | GO:0004386: helicase activity | 1.75E-02 |
| 58 | GO:0005516: calmodulin binding | 1.98E-02 |
| 59 | GO:0005525: GTP binding | 2.16E-02 |
| 60 | GO:0003743: translation initiation factor activity | 2.72E-02 |
| 61 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.88E-02 |
| 62 | GO:0003824: catalytic activity | 2.92E-02 |
| 63 | GO:0000287: magnesium ion binding | 3.27E-02 |
| 64 | GO:0050660: flavin adenine dinucleotide binding | 3.68E-02 |
| 65 | GO:0003729: mRNA binding | 3.95E-02 |
| 66 | GO:0061630: ubiquitin protein ligase activity | 4.01E-02 |
| 67 | GO:0052689: carboxylic ester hydrolase activity | 4.15E-02 |
| 68 | GO:0042803: protein homodimerization activity | 4.55E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005782: peroxisomal matrix | 4.81E-07 |
| 2 | GO:0005829: cytosol | 5.81E-05 |
| 3 | GO:0005886: plasma membrane | 6.29E-05 |
| 4 | GO:0031314: extrinsic component of mitochondrial inner membrane | 1.10E-04 |
| 5 | GO:0005945: 6-phosphofructokinase complex | 4.75E-04 |
| 6 | GO:0005737: cytoplasm | 6.08E-04 |
| 7 | GO:0031597: cytosolic proteasome complex | 6.94E-04 |
| 8 | GO:0031595: nuclear proteasome complex | 8.11E-04 |
| 9 | GO:0005635: nuclear envelope | 1.17E-03 |
| 10 | GO:0008540: proteasome regulatory particle, base subcomplex | 1.32E-03 |
| 11 | GO:0005740: mitochondrial envelope | 1.47E-03 |
| 12 | GO:0090404: pollen tube tip | 1.61E-03 |
| 13 | GO:0005777: peroxisome | 2.47E-03 |
| 14 | GO:0032580: Golgi cisterna membrane | 5.45E-03 |
| 15 | GO:0005643: nuclear pore | 7.39E-03 |
| 16 | GO:0000502: proteasome complex | 1.28E-02 |
| 17 | GO:0005834: heterotrimeric G-protein complex | 1.51E-02 |
| 18 | GO:0005794: Golgi apparatus | 2.43E-02 |
| 19 | GO:0016020: membrane | 2.60E-02 |
| 20 | GO:0016021: integral component of membrane | 3.61E-02 |
| 21 | GO:0009506: plasmodesma | 4.41E-02 |
| 22 | GO:0005743: mitochondrial inner membrane | 4.85E-02 |